EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MYCSS (1,4-alpha-glucan-branching enzyme OS=Mycobacterium sp. (strain MCS) GN=glgB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15
Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+RG    WGT +F +   +V +FL++N  +W+ E+ +DG +  +++SM+Y         G          + +A+ +L   N  +H   P I+TIAE++T +PG+  PT  GGLGF    N+      L+F+   P H
Sbjct:  379 PRRGEQLDWGTYVFDFGRAEVRNFLVANALYWLQEFHVDGLRVDAVASMLYLDYSRPE-GGWTPNIYGGRENLEAVQFLQEMNATVHKASPGIVTIAEESTSWPGVTRPTNLGGLGFSMKWNMGWMNDTLAFISRDPIH 516          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MYCSK (1,4-alpha-glucan-branching enzyme OS=Mycobacterium sp. (strain KMS) GN=glgB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15
Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+RG    WGT +F +   +V +FL++N  +W+ E+ +DG +  +++SM+Y         G          + +A+ +L   N  +H   P I+TIAE++T +PG+  PT  GGLGF    N+      L+F+   P H
Sbjct:  379 PRRGEQLDWGTYVFDFGRAEVRNFLVANALYWLQEFHVDGLRVDAVASMLYLDYSRPE-GGWTPNIYGGRENLEAVQFLQEMNATVHKASPGIVTIAEESTSWPGVTRPTNLGGLGFSMKWNMGWMNDTLAFISRDPIH 516          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MYCSJ (1,4-alpha-glucan-branching enzyme OS=Mycobacterium sp. (strain JLS) GN=glgB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15
Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+RG    WGT +F +   +V +FL++N  +W+ E+ +DG +  +++SM+Y         G          + +A+ +L   N  +H   P I+TIAE++T +PG+  PT  GGLGF    N+      L+F+   P H
Sbjct:  379 PRRGEQLDWGTYVFDFGRAEVRNFLVANALYWLQEFHVDGLRVDAVASMLYLDYSRPE-GGWTPNIYGGRENLEAVQFLQEMNATVHKASPGIVTIAEESTSWPGVTRPTNLGGLGFSMKWNMGWMNDTLAFISRDPIH 516          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SYNPX (1,4-alpha-glucan-branching enzyme OS=Synechococcus sp. (strain WH8102) GN=glgB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.558e-15
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQY---VDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y       L  D E   N++    + +A+ +L  AN +L    P  ++IAE++T +P + +PT  GGLGF+   N+      L + E  P
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVFWFEQFHIDGIRVDAVASMLYRD----YLRPDGEWLANEHGGRENTEAVQFLQQANHVLFQHFPGALSIAEESTTWPMVTQPTEIGGLGFNLKWNMGWMHDMLDYFELDP 523          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHESR (1,4-alpha-glucan-branching enzyme OS=Shewanella sp. (strain MR-7) GN=glgB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.558e-15
Identity = 54/186 (29.03%), Postives = 101/186 (54.30%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P++G H  W T ++ YD  +V  FLLSN  +W+ E+ +DG +  ++SSM+Y    ++   G  L        + +A+ +L + N+ L+   P I  IAE++T + G+ +PT  GGLGF +  N+      LS+L   P + ++  +++  +L+    YS++  M + +H++ + G  S    + G+
Sbjct:  373 PRKGTHPDWDTLIYNYDRGEVRSFLLSNACYWLREFHLDGLRLDAVSSMLYL--DYSREPGQWLPNAYGGRENLEAIHFLQMLNQRLYQAFPGICMIAEESTAFAGVTKPTDCGGLGFGFKWNMGWMNDSLSYLGRDPIYRQYHHNQLTFSLM--YAYSEQ-FMLSISHDEVVHGKGSLLHKIPGD 553          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROM3 (1,4-alpha-glucan-branching enzyme OS=Prochlorococcus marinus (strain MIT 9303) GN=glgB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.558e-15
Identity = 47/140 (33.57%), Postives = 77/140 (55.00%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQ---YVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y       L  D E   N+     + +A+ +L  AN +L    P  ++IAE++T +P + +PT  GGLGF+   N+      L + E  P
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVYWFEQFHIDGIRVDAVASMLYRD----YLRPDGEWIANEDGGRENTEAVRFLQQANHVLFQHFPGALSIAEESTTWPMVTQPTDMGGLGFNLKWNMGWMHDMLDYFELDP 523          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB2_RHIL3 (1,4-alpha-glucan-branching enzyme 2 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=glgB2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.558e-15
Identity = 55/187 (29.41%), Postives = 96/187 (51.34%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKD---ALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ GFH+ W T ++     +V  FL+++   W+  Y IDG +  +++SM+Y          + E   NQY  ++   A+ +    N I+H   P+ +TIAE++T +PG+ +P  QGGLGFD   N+      LS++E  P +  S +    T      YS++ I+   +H++ + G  S    + G+
Sbjct:  372 PREGFHRDWNTLIYNLGRNEVKGFLIASALEWLERYHIDGLRVDAVASMLYRDYS----RNEGEWIPNQYGGRENLEAVEFFKHLNSIIHERCPHAMTIAEESTAWPGVTKPPEQGGLGFDIKWNMGWMHDSLSYIEKDPIYR-SYAHGTMTFGMIYAYSERFIL-PISHDEVVYGKGSLLTKMPGD 552          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SYNS9 (1,4-alpha-glucan-branching enzyme OS=Synechococcus sp. (strain CC9902) GN=glgB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQ---YVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y       L  D E   N+     + +A+ +L  AN +L   +P  ++IAE++T +P + +PT  GGLGF+   N+      L + E  P
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVFWFEQFHIDGIRVDAVASMLYRD----YLRPDGEWLPNENGGRENTEAVRFLQQANHVLFQHYPGALSIAEESTTWPMVTQPTDMGGLGFNLKWNMGWMHDMLDYFELDP 523          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_LEIXX (1,4-alpha-glucan-branching enzyme OS=Leifsonia xyli subsp. xyli GN=glgB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLV 460
            P+RG H  WGT +F Y +  V +FL++N  +W+ E+ IDG +  +++SM+Y         G          + +A+ +L       +  +P  I IAE++T YPG+  PT+ GGLGF    N+      L ++   P +  W  S+I  + V
Sbjct:  370 PRRGEHADWGTYVFDYGNSQVRNFLVANALYWLEEFHIDGLRVDAVASMLYLDYS-RDADGWEPNIHGGRENLEAIAFLQEVTATAYKRNPGTIVIAEESTSYPGVTAPTSSGGLGFGLKWNMGWMHDSLQYIREDPLYRSWHHSRITFSFV 520          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_OCEIH (1,4-alpha-glucan-branching enzyme OS=Oceanobacillus iheyensis GN=glgB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 52/188 (27.66%), Postives = 98/188 (52.13%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQY---VDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            PK+   K WGT  F Y   +V  FL+SN  +W+ E+ IDG +  +++SM+Y +        + E+  N Y    + +A  +L   N+++ +  P  + +AED++  P +  P  +GGLGF+Y  N+      LSF+E    H +W  +++  + +    YS+  ++   +H++ + G  S  + + G+
Sbjct:  264 PKKSEKKSWGTLAFDYGRPEVQSFLISNAIYWLKEFHIDGLRVDAVASMLYLN---FDRYDEEEKIYNTYGGEENLEAFAFLRKLNKVVFSYIPGALMMAEDSSDLPLVTAPVNKGGLGFNYKWNMGWMNDLLSFMEKESIHRKWHHNRLTFSFMYT--YSENYLL-PLSHDEVVHGKKSLLDKMPGD 445          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_MYCSS6.553e-1531.651,4-alpha-glucan-branching enzyme OS=Mycobacterium... [more]
GLGB_MYCSK6.553e-1531.651,4-alpha-glucan-branching enzyme OS=Mycobacterium... [more]
GLGB_MYCSJ6.553e-1531.651,4-alpha-glucan-branching enzyme OS=Mycobacterium... [more]
GLGB_SYNPX8.558e-1533.571,4-alpha-glucan-branching enzyme OS=Synechococcus... [more]
GLGB_SHESR8.558e-1529.031,4-alpha-glucan-branching enzyme OS=Shewanella sp... [more]
GLGB_PROM38.558e-1533.571,4-alpha-glucan-branching enzyme OS=Prochlorococc... [more]
GLGB2_RHIL38.558e-1529.411,4-alpha-glucan-branching enzyme 2 OS=Rhizobium l... [more]
GLGB_SYNS91.118e-1433.571,4-alpha-glucan-branching enzyme OS=Synechococcus... [more]
GLGB_LEIXX1.118e-1430.921,4-alpha-glucan-branching enzyme OS=Leifsonia xyl... [more]
GLGB_OCEIH1.460e-1427.661,4-alpha-glucan-branching enzyme OS=Oceanobacillu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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