EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_BUTFI (1,4-alpha-glucan-branching enzyme OS=Butyrivibrio fibrisolvens GN=glgB PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.252e-14
Identity = 42/140 (30.00%), Postives = 78/140 (55.71%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++G H  WGT++F     +V +FL++N  +W+ ++ IDG +  +++SM+Y   G      D +   N+Y D    DA+ +    N ++   +PNI+TIAE++T +P +  P  + GLGF +  N+     +  +++  P
Sbjct:  270 PRKGEHPDWGTKIFNLAKPEVKNFLIANALYWIRKFHIDGLRVDAVASMLYLDYG----KKDGQWVPNKYGDNKNLDAIEFFKHFNSVVRGTYPNILTIAEESTAWPKVTAPPEEDGLGFAFKWNMGWMHDFCEYMKLDP 405          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB1_RHIEC (1,4-alpha-glucan-branching enzyme 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgB1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.252e-14
Identity = 41/142 (28.87%), Postives = 82/142 (57.75%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQY---VDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P++GFH  W T ++ +   +V+ +L++N  +W  ++ +DG +  +++SM+Y    ++   G  E   N+Y    + +A+ +L   N  ++  H N++TIAE++T +P + +P  +GGLGF +  N+      LS+++  P H
Sbjct:  375 PRKGFHPDWNTAIYNFGRTEVVSYLVNNALYWAEKFHLDGLRVDAVASMLYLD--YSRKHG--EWIPNEYGGNENLEAVRFLQDLNIRIYGQHSNVMTIAEESTSWPKVSQPVHEGGLGFGFKWNMGFMHDTLSYMKRDPVH 512          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHEB8 (1,4-alpha-glucan-branching enzyme OS=Shewanella baltica (strain OS185) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++G H  W T ++ YD  +V  FLLSN  +W+ E+  DG +  ++SSM+Y    ++   G  L        + +A+ +L + N+ L+   P +  IAE++T + G+ +PT Q GLGF +  N+      LS+L   P
Sbjct:  373 PRKGTHPDWDTLIYNYDRGEVRSFLLSNACYWLREFHFDGLRLDAVSSMLYL--DYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGVCMIAEESTAFAGVTKPTDQQGLGFGFKWNMGWMNDSLSYLGRDP 508          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHEB2 (1,4-alpha-glucan-branching enzyme OS=Shewanella baltica (strain OS223) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14
Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++G H  W T ++ YD  +V  FLLSN  +W+ E+  DG +  ++SSM+Y    ++   G  L        + +A+ +L + N+ L+   P I  IAE++T + G+ +PT Q GLGF +  N+      LS+L   P
Sbjct:  373 PRKGTHPDWDTLIYNYDRGEVRSFLLSNACYWLREFHFDGLRLDAVSSMLYL--DYSREPGQWLPNTYGGRENLEAINFLQILNQRLYQAFPGICMIAEESTAFAGVTKPTDQQGLGFGFKWNMGWMNDSLSYLGRDP 508          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SERP5 (1,4-alpha-glucan-branching enzyme OS=Serratia proteamaculans (strain 568) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14
Identity = 42/140 (30.00%), Postives = 74/140 (52.86%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ GFH+ W T ++ Y   +V ++L  N  +W+  Y ID  +  +++SMIY    ++   G+ +  Y     + +A+ +L   N+ +    P  +T+AE++T YPG+  P    GLGF Y  NL      L++++  P H
Sbjct:  362 PREGFHQDWNTLIYNYGRHEVRNYLAGNALYWLERYGIDALRVDAVASMIY--RDYSRAEGEWVPNYYGGNENLEAIAFLRYTNQSVGKERPGAVTLAEESTDYPGVTLPPESNGLGFHYKWNLGWMHDTLNYMQCDPVH 499          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PSE14 (1,4-alpha-glucan-branching enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14
Identity = 53/188 (28.19%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKD---ALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYS-DKMIMYAENHNQCISGGHSFAEILFGE 559
            PK GFH+ W T ++     +V  F+L++   W+  Y IDG +  +++SM+Y    ++   G  E   N++  ++    + +L   N+++    P  + IAE++T +PG+ EPT QGGLGF+Y  N+      L ++   P H        STL     Y+  +  +   +H++ + G HS  + + G+
Sbjct:  377 PKEGFHQDWNTLIYNLGRTEVHGFMLASALHWLKHYHIDGLRVDAVASMLY--RDYSRNAG--EWVPNRFGGRENIETIDFLRHLNDVVALEAPGTMVIAEESTAWPGVSEPTQQGGLGFNYKWNMGWMHDSLQYMMRDPLHRRHHH---STLTFGLVYAWSERFVLPISHDEVVHGKHSLIDKMPGD 557          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_VIBCH (1,4-alpha-glucan-branching enzyme OS=Vibrio cholerae GN=glgB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 54/193 (27.98%), Postives = 98/193 (50.78%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIY-----THNGFA-SLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEIS 565
            P+RG+H+ W + ++      V  FL++N  +W   + IDG +  +++SM+Y     +H+ +  ++ G  E Y       DA+      NE ++   PN +TIAE++T +PG+  PT  GGLGF +  N+      LS+++  P H ++  + +   L+           YA + N  +S  H   E+++G+ S
Sbjct:  302 PRRGWHQDWNSYIYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASMLYLDYSRSHDQWIPNVDGGRENY-------DAIATFKWMNEEVYKHFPNAMTIAEESTAFPGVSAPTFMGGLGFGFKWNMGWMHDSLSYIKEDPVHRKYHHNTLTFPLI-----------YAFSENYVLSLSHD--EVVYGKRS 474          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RHOMR (1,4-alpha-glucan-branching enzyme OS=Rhodothermus marinus GN=glgB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 42/137 (30.66%), Postives = 74/137 (54.01%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            PK  +H  WGT +F Y+   V +FL+SN  +W+ +Y +DG +  +++SM+Y        T ++        + +A+ ++   NE ++   P  +TIAE++T +PG+  PT   GLGF Y  N+      L +++  P
Sbjct:  262 PKMRYHPDWGTYVFDYNKPGVRNFLISNALFWLEKYHVDGLRVDAVASMLYRDYSRKEWTPNI---FGGRENLEAIDFIKKFNETVYLHFPEAMTIAEESTAWPGVSAPTYNNGLGFLYKWNMGWMHDTLDYIQRDP 395          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROMA (1,4-alpha-glucan-branching enzyme OS=Prochlorococcus marinus GN=glgB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 46/140 (32.86%), Postives = 79/140 (56.43%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDL---EEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y    +    G+    E+  N+  + +A+ +L  AN +L    P  ++IAE++T + G+ +PT  GGLGF+   N+      L + E  P
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVYWFEQFHIDGIRVDAVASMLY--KDYLRPEGEWIPNEDGGNE--NFEAVNFLQQANHVLFQHFPGALSIAEESTTWSGVTKPTDMGGLGFNLKWNMGWMHDMLDYFEIDP 523          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_NITEC (1,4-alpha-glucan-branching enzyme OS=Nitrosomonas eutropha (strain C91) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 51/192 (26.56%), Postives = 94/192 (48.96%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYSDKMIMYAEN------HNQCISGGHSFAEILFGEI 562
            P+ G+H+ WGT +F Y   +V  FLLS+ ++W+  + IDG +  +++SM+Y    ++   G+ L        + DA+ +L   N ++H      +T AE++T +P +  PT  GGLGF    N+      L++++  P H             N    +++  Y EN      H++ + G  S  + + G++
Sbjct:  372 PRLGYHQDWGTYIFNYGRSEVKSFLLSSAHYWLSVFHIDGLRVDAVASMLYL--DYSRKEGEWLPNRFGGRENLDAIDFLRELNTMVHGEFSGALTFAEESTSWPAVSRPTYLGGLGFSMKWNMGWMNDTLNYMQLDPIHRHYHH--------NELTFNQLYAYTENFILPLSHDEVVHGKKSLLDKMSGDV 553          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_BUTFI3.252e-1430.001,4-alpha-glucan-branching enzyme OS=Butyrivibrio ... [more]
GLGB1_RHIEC3.252e-1428.871,4-alpha-glucan-branching enzyme 1 OS=Rhizobium e... [more]
GLGB_SHEB84.247e-1432.611,4-alpha-glucan-branching enzyme OS=Shewanella ba... [more]
GLGB_SHEB24.247e-1433.331,4-alpha-glucan-branching enzyme OS=Shewanella ba... [more]
GLGB_SERP54.247e-1430.001,4-alpha-glucan-branching enzyme OS=Serratia prot... [more]
GLGB_PSE144.247e-1428.191,4-alpha-glucan-branching enzyme OS=Pseudomonas s... [more]
GLGB_VIBCH5.547e-1427.981,4-alpha-glucan-branching enzyme OS=Vibrio choler... [more]
GLGB_RHOMR5.547e-1430.661,4-alpha-glucan-branching enzyme OS=Rhodothermus ... [more]
GLGB_PROMA5.547e-1432.861,4-alpha-glucan-branching enzyme OS=Prochlorococc... [more]
GLGB_NITEC5.547e-1426.561,4-alpha-glucan-branching enzyme OS=Nitrosomonas ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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