EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MESSB (1,4-alpha-glucan-branching enzyme OS=Mesorhizobium sp. (strain BNC1) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 40/140 (28.57%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ GFH+ W T ++ +   +V +FL +N  +W+  Y +DG +  +++SM+Y    ++   G+ +        + +A+ +L   N  L   HP   +IAE++T +PG+  P   GGLGF +  N+      L ++++ P H
Sbjct:  374 PRLGFHRDWNTLIYNFGRREVANFLTANALFWLDRYHVDGLRVDAVASMLYLD--YSRQPGEWIPNKHGGNENLEAIAFLRETNTALFGSHPGTTSIAEESTAFPGVSRPVYAGGLGFGFKWNMGWMHDTLDYMQHEPIH 511          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_DESDG (1,4-alpha-glucan-branching enzyme OS=Desulfovibrio desulfuricans (strain G20) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 41/138 (29.71%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G H  WGT +F Y   +V +FL +N  +W  E+ +DG +  +++SM+Y    ++   G+ L        + +A+ +L   N ++H  +P ++ IAE++T +PG+  P   GGLGF +  N+      L+++   P
Sbjct:  277 PRLGEHPDWGTYVFNYGRHEVRNFLFANALYWFKEFHVDGLRIDAVASMLYL--DYSRKEGEWLPNVHGGNENLEAIDFLRELNRVVHEQYPGVMMIAEESTSWPGVSRPLYTGGLGFTFKWNMGWMHDTLNYMRQDP 412          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_DECAR (1,4-alpha-glucan-branching enzyme OS=Dechloromonas aromatica (strain RCB) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 45/148 (30.41%), Postives = 77/148 (52.03%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKI 445
            P+ G H  WGT +F Y   +V  FL+S+ +WW+ E+  DG +  +++SM+Y    ++   G+ L        + +A+ +L   N ++H   P  +TIAE++T +P +  PT  GGLGF    N+      L +    P +  W  S++
Sbjct:  259 PRLGLHADWGTHIFNYGRHEVRSFLMSSAHWWLSEFHFDGLRVDAVASMLYL--DYSRKHGEWLPNKFGGRENLEAIDFLKQLNAMVHGDFPGALTIAEESTAWPMVSRPTYVGGLGFSMKWNMGWMNDSLRYFHRDPIYRRWHHSEL 404          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RHIME (1,4-alpha-glucan-branching enzyme OS=Rhizobium meliloti GN=glgB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 41/142 (28.87%), Postives = 78/142 (54.93%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQY---VDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P++GFH  W T ++ +   +V+ FL++N  +W  ++ +DG +  +++SM+Y    ++   G  E   N+Y    + +A+ +L   N  ++ +H  ++TIAE++T +P +  P   GGLGF +  N+      L +L   P H
Sbjct:  376 PRQGFHPDWNTAIYNFGRQEVVAFLVNNALYWAEKFHVDGLRVDAVASMLYL--DYSRKHG--EWVPNEYGGNENLEAVRFLQTMNTRIYGIHQGVLTIAEESTSWPKVSHPVHAGGLGFGFKWNMGFMHDTLQYLSREPVH 513          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MANSM (1,4-alpha-glucan-branching enzyme OS=Mannheimia succiniciproducens (strain MBEL55E) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 52/188 (27.66%), Postives = 95/188 (50.53%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            PK G+H+ W T ++ Y   +V ++L  N  +WV  + +DG +  +++SMIY          D E   NQY  +   +A+ +L   N +L    P +  IAE++T +PG+  P   GGLGF Y  N+      L +++  P + ++   K+   ++   QYS+  ++   +H++ + G  S    + G+
Sbjct:  362 PKEGYHQDWNTLIYNYGRHEVKNYLSGNALYWVERFGLDGLRVDAVASMIYRDYS----RRDGEWVPNQYGGRENLEAIEFLKHTNYVLGTELPGVAAIAEESTSFPGVTLPPEHGGLGFHYKWNMGWMNDTLEYMKLDPVYRQYHHGKMTFAML--YQYSENFVL-PLSHDEVVHGKGSLITKMSGD 542          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_HAES2 (1,4-alpha-glucan-branching enzyme OS=Haemophilus somnus (strain 2336) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 50/177 (28.25%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            PK G+H+ W T ++ Y   +V ++L SN  +W+  + +DG +  +++SMIY          D +   NQY  +   +A+ +L   N +L    P +++IAE++T + G+  P  +GGLGF +  N+      LS+++  P + +   S++   +V   QYS+  I+   +H++ + G
Sbjct:  362 PKEGYHQDWNTLIYNYGRHEVKNYLASNALYWMERFGLDGIRVDAVASMIYRDYS----REDGQWIPNQYGGRENLEAIEFLKQTNHLLGTEIPGVVSIAEESTSFAGVTHPPYEGGLGFHFKWNMGWMNDTLSYMKKDPIYRQHHHSQMTFGMV--YQYSENFIL-PLSHDEVVHG 531          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_HAES1 (1,4-alpha-glucan-branching enzyme OS=Haemophilus somnus (strain 129Pt) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 50/177 (28.25%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            PK G+H+ W T ++ Y   +V ++L SN  +W+  + +DG +  +++SMIY          D +   NQY  +   +A+ +L   N +L    P +++IAE++T + G+  P  +GGLGF +  N+      LS+++  P + +   S++   +V   QYS+  I+   +H++ + G
Sbjct:  362 PKEGYHQDWNTLIYNYGRHEVKNYLASNALYWMERFGLDGIRVDAVASMIYRDYS----REDGQWIPNQYGGRENLEAIEFLKQTNHLLGTEIPGVVSIAEESTSFAGVTHPPYEGGLGFHFKWNMGWMNDTLSYMKKDPIYRQHHHSQMTFGMV--YQYSENFIL-PLSHDEVVHG 531          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_HAEIG (1,4-alpha-glucan-branching enzyme OS=Haemophilus influenzae (strain PittGG) GN=glgB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 50/180 (27.78%), Postives = 101/180 (56.11%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHS 535
            P+ G+H+ W T ++ Y   +V +FL SN  +W+  + +DG +  +++SMIY    ++ + G  E   NQY  +   +A+ +L   N  +H+     I+IAE++T + G+  P+  GGLGF++  N+      L++++  P + ++  +K+   +V   QYS+  ++   +H++ + G +S
Sbjct:  362 PREGYHQDWNTLIYNYGRNEVKNFLSSNALYWLERFGVDGIRVDAVASMIY--RDYSRVEG--EWIPNQYGGRENLEAIEFLKHTNWKIHSEMAGAISIAEESTSFAGVTHPSENGGLGFNFKWNMGWMNDTLAYMKLDPIYRQYHHNKMTFGMV--YQYSENFVL-PLSHDEVVHGKYS 534          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ERWCT (1,4-alpha-glucan-branching enzyme OS=Erwinia carotovora subsp. atroseptica GN=glgB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 53/188 (28.19%), Postives = 94/188 (50.00%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEI 562
            P+ G+H+ W T ++ Y   +V ++L  N  +W+  Y IDG +  +++SMIY    ++   G  E   N Y  K   +A+ +L   N  L    P  IT+AE++T YPG+  P    GLGF Y  N+      L++++  P H      ++ T      YS+  ++   +H++ + G  S  + + G++
Sbjct:  360 PREGYHQDWNTLIYNYGRHEVRNYLAGNALFWMERYGIDGLRVDAVASMIY--RDYSRSEG--EWVPNHYGGKENLEAIAFLRYTNHTLGHAAPAAITLAEESTDYPGVTLPPDCNGLGFHYKWNMGWMHDTLTYMQLDPVHRKHHHDLL-TFGMLYAYSENFVL-PLSHDEVVHGKRSLLDRMPGDV 541          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_DEIRA (1,4-alpha-glucan-branching enzyme OS=Deinococcus radiodurans GN=glgB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 43/137 (31.39%), Postives = 74/137 (54.01%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++G+H  W T +F Y   +V+ FL+ +   WV +Y +DG +  +++SM+Y      S T  +        + +A+ +L   NE+ H + P  + IAE++T +PG+  PT + GLGFDY   +      L++ E  P
Sbjct:  266 PRKGYHYDWNTYIFDYGRNEVVMFLIGSALKWVQDYHVDGLRVDAVASMLYLD---FSRTEWVPNIYGGRENLEAIAFLKRLNEVAHHMAPGCLMIAEESTSFPGVTTPTPE-GLGFDYKWAMGWMNDSLAYFEQDP 398          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_MESSB5.547e-1428.571,4-alpha-glucan-branching enzyme OS=Mesorhizobium... [more]
GLGB_DESDG5.547e-1429.711,4-alpha-glucan-branching enzyme OS=Desulfovibrio... [more]
GLGB_DECAR5.547e-1430.411,4-alpha-glucan-branching enzyme OS=Dechloromonas... [more]
GLGB_RHIME7.245e-1428.871,4-alpha-glucan-branching enzyme OS=Rhizobium mel... [more]
GLGB_MANSM7.245e-1427.661,4-alpha-glucan-branching enzyme OS=Mannheimia su... [more]
GLGB_HAES27.245e-1428.251,4-alpha-glucan-branching enzyme OS=Haemophilus s... [more]
GLGB_HAES17.245e-1428.251,4-alpha-glucan-branching enzyme OS=Haemophilus s... [more]
GLGB_HAEIG7.245e-1427.781,4-alpha-glucan-branching enzyme OS=Haemophilus i... [more]
GLGB_ERWCT7.245e-1428.191,4-alpha-glucan-branching enzyme OS=Erwinia carot... [more]
GLGB_DEIRA7.245e-1431.391,4-alpha-glucan-branching enzyme OS=Deinococcus r... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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