EY735677

Overview
NameEY735677
Unique NameEY735677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735677_ssr21 microsatellite EY735677_ssr21:21..32. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.637e-69
Identity = 128/149 (85.91%), Postives = 132/149 (88.59%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLR 532
            MG  F  L   L  KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLV   +QDLPNAMNA EIT +LGLHSLR
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR 149          

HSP 2 Score: 35.8094 bits (81), Expect = 1.637e-69
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 3
Query:  507 DSLAFTLFGGAHWYIHSTCATSGEGVFEG 593
            D L        +WYI +TCATSG+G++EG
Sbjct:  141 DKLGLHSLRHRNWYIQATCATSGDGLYEG 169          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.637e-69
Identity = 128/149 (85.91%), Postives = 132/149 (88.59%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLR 532
            MG  F  L   L  KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLV   +QDLPNAMNA EIT +LGLHSLR
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR 149          

HSP 2 Score: 35.8094 bits (81), Expect = 1.637e-69
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 3
Query:  507 DSLAFTLFGGAHWYIHSTCATSGEGVFEG 593
            D L        +WYI +TCATSG+G++EG
Sbjct:  141 DKLGLHSLRHRNWYIQATCATSGDGLYEG 169          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 1.637e-69
Identity = 128/149 (85.91%), Postives = 132/149 (88.59%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLR 532
            MG  F  L   L  KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLV   +QDLPNAMNA EIT +LGLHSLR
Sbjct:    1 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR 149          

HSP 2 Score: 35.8094 bits (81), Expect = 1.637e-69
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 3
Query:  507 DSLAFTLFGGAHWYIHSTCATSGEGVFEG 593
            D L        +WYI +TCATSG+G++EG
Sbjct:  141 DKLGLHSLRHRNWYIQATCATSGDGLYEG 169          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4)

HSP 1 Score: 250.751 bits (639), Expect = 6.173e-69
Identity = 123/152 (80.92%), Postives = 137/152 (90.13%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLRRGP 541
            MGL+ +KLF+ L  ++EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWR+YFQNTQG+IFVVDSNDRDR+ EAR+EL  MLNEDEL+DAVLLV   +QDLPNAMNA EIT ++GLHS+   P
Sbjct:    1 MGLTISKLFASLLGRREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSIMNRP 152          

HSP 2 Score: 32.3426 bits (72), Expect = 6.173e-69
Identity = 10/17 (58.82%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  543 WYIHSTCATSGEGVFEG 593
            W+I +TCAT+G+G++EG
Sbjct:  153 WFIQATCATTGDGLYEG 169          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 1.145e-67
Identity = 121/149 (81.21%), Postives = 130/149 (87.25%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLR 532
            MGL+ + L +RLF KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDR+ EA  EL  ML EDELRDAVLLV   +QDLPNAM A E+T +L L+ LR
Sbjct:    1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRLNQLR 149          

HSP 2 Score: 36.965 bits (84), Expect = 1.145e-67
Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 3
Query:  507 DSLAFTLFGGAHWYIHSTCATSGEGVFEG 593
            D L        HW+I STCAT G G++EG
Sbjct:  141 DKLRLNQLRNRHWFIQSTCATQGHGLYEG 169          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.293e-67
Identity = 131/150 (87.33%), Postives = 136/150 (90.67%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLRR 535
            MG  F KLF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLV   +QDLPNAMNA EIT +LGLHSLR+
Sbjct:    1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQ 150          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 3.293e-67
Identity = 131/150 (87.33%), Postives = 136/150 (90.67%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLRR 535
            MG  F KLF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLV   +QDLPNAMNA EIT +LGLHSLR+
Sbjct:    1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQ 150          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.293e-67
Identity = 131/150 (87.33%), Postives = 136/150 (90.67%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLRR 535
            MG  F KLF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLV   +QDLPNAMNA EIT +LGLHSLR+
Sbjct:    1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQ 150          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 7.337e-67
Identity = 127/146 (86.99%), Postives = 134/146 (91.78%), Query Frame = 2
Query:   98 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLRR 535
            F KLF  LF KKEMRILMVGLDAAGKTTILYKLKLGE+VTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDRDRVVEAR+EL RMLNEDELRDA+LLV   +QDLPNAMNA EIT +LGL SLR+
Sbjct:    8 FGKLFDGLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQ 153          
BLAST of EY735677 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3)

HSP 1 Score: 243.432 bits (620), Expect = 7.345e-67
Identity = 121/149 (81.21%), Postives = 132/149 (88.59%), Query Frame = 2
Query:   86 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVCG*QQDLPNAMNAGEITGQLGLHSLR 532
            MGL+ + LFSRLF KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ E  +EL +ML EDELRDAVLL+   +QDLPNAM   E+T +LGL SLR
Sbjct:    1 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLR 149          

HSP 2 Score: 32.7278 bits (73), Expect = 7.345e-67
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 3
Query:  507 DSLAFTLFGGAHWYIHSTCATSGEGVFEG 593
            D L         WY+ +TCAT G G++EG
Sbjct:  141 DKLGLQSLRNRTWYVQATCATQGTGLYEG 169          
The following BLAST results are available for this feature:
BLAST of EY735677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF3_MOUSE1.637e-6985.91ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 ... [more]
ARF3_HUMAN1.637e-6985.91ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
ARF3_BOVIN1.637e-6985.91ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE... [more]
ARF_CANAL6.173e-6980.92ADP-ribosylation factor OS=Candida albicans GN=ARF... [more]
ARF2_DROME1.145e-6781.21ADP-ribosylation factor 2 OS=Drosophila melanogast... [more]
ARF2_RAT3.293e-6787.33ADP-ribosylation factor 2 OS=Rattus norvegicus GN=... [more]
ARF2_MOUSE3.293e-6787.33ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 ... [more]
ARF2_BOVIN3.293e-6787.33ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE... [more]
ARF_NEUCR7.337e-6786.99ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]
ARF4_BOVIN7.345e-6781.21ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735677 ID=EY735677; Name=EY735677; organism=Citrus sinensis; type=EST; length=900bp
CACGCGTCCGGTATTTTTATAGAGAGAGAGAGGGGCAGTAGATCTGCACC
AAGGCAAAAACCGCTCTCTTCCTCAGTTGTGAAAAATGGGGCTGTCTTTC
ACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAAAGAGATGAGAATTCTCAT
GGTAGGTCTCGATGCAGCTGGTAAGACTACTATCCTGTACAAGCTTAAGC
TCGGAGAGATCGTCACCACCATTCCTACCATTGGATTTAATGTAGAGACC
GTTGAGTATAAGAACATCAGCTTTACTGTCTGGGATGTCGGGGGTCAAGA
CAAGATCCGACCTTTGTGGAGACATTATTTCCAAAACACCCAAGGACTCA
TCTTTGTGGTTGACAGTAATGATCGCGACCGTGTGGTAGAAGCTAGGGAT
GAGTTGCACAGAATGTTGAATGAGGATGAATTGAGAGATGCTGTGCTGCT
TGTATGTGGCTAACAGCAAGATCTTCCAAATGCAATGAATGCTGGTGAGA
TAACTGGACAGCTTGGCCTTCACTCTCTTCGGCGGGGCCCATTGGTATAT
CCATAGCACCTGTGCCACTTCTGGTGAAGGGGTGTTTGAGGGGACTTGAC
TGGCGTCGGGGAGGGGTGGGGGGGTAGGGGTGTGACCACTCCACTTTTTA
TTTGTGGGTTGGCGGTAGCGGGCGAAAGACCAGAGTCATTATGTGGTTTT
TGGTGGTTCTTGTGTTTGCACCCGCCGGATTATGTGGGGTGGTCGCGGTT
TCTGTGGAGCTGGCTGTGTCCGCTGTCGTCGTGTCTGGGATTGTGTTGCG
GTGCTGCTGGGTTAGGACGCCCGGCACGCCTGTCACCAGCCCGGGAAGAC
TCGAAGCGGTGTGGAGGCCTGAGAGCATCCCCACGGGCAGCCCGGGGGCG
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