EY735670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735670 vs. ExPASy Swiss-Prot
Match: RAE1_MOUSE (Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus GN=Chm PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.863e-24 Identity = 67/231 (29.00%), Postives = 120/231 (51.95%), Query Frame = 3 Query: 81 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTKELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVXFDEKGKXXGVTSK-GETAKCKKVVGDPSYLAKQVRKGXE 767 R +N+D++ K + + G L+ +LI ++V++Y FK + + +G V +VP + + S + + EKR KF + +Y E+ P ++ + T T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K + + G+ K V + SYL++ G + Sbjct: 237 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEY-EDHPDEYKAYEET--TFSEYLKTQKLTPNLQYFVLHSIAMTSE---TTSSTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIVDQFGQRIISKHFVIEDSYLSENTCSGVQ 460
BLAST of EY735670 vs. ExPASy Swiss-Prot
Match: RAE1_RAT (Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus GN=Chm PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.799e-23 Identity = 65/226 (28.76%), Postives = 119/226 (52.65%), Query Frame = 3 Query: 81 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE--NDPKTHEGMDLTRVTTKELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVXFDEKGKXXGVTSK-GETAKCKKVVGDPSYLAK 746 R +N+D++ + + + G L+ +LI ++V++Y FK + + +G V +VP + + S + + EKR KF + +Y+E ++ + +EG T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K V + G+ K + + SYL++ Sbjct: 222 RRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEG-----TTFSEYLKTQKLTPNLQYFVLHSIAMTSE---TTSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438
BLAST of EY735670 vs. ExPASy Swiss-Prot
Match: RAE1_HUMAN (Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens GN=CHM PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 8.295e-22 Identity = 59/202 (29.21%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 81 RDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTKELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVXFDEKGKXXGV 683 R +N+D++ K + + G L+ +LI ++V++Y FK + + +G+V +VP + + S + + EKR KF + +Y E P ++G + +T E + L N + H++A+ + +D +K K + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K + Sbjct: 225 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEY-EKYPDEYKGYE--EITFYEYLKTQKLTPNLQYIVMHSIAMTSETA---SSTIDGLKATKNFLHCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAI 419
BLAST of EY735670 vs. ExPASy Swiss-Prot
Match: RAEP_YEAST (Rab proteins geranylgeranyltransferase component A OS=Saccharomyces cerevisiae GN=MRS6 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11 Identity = 60/226 (26.55%), Postives = 100/226 (44.25%), Query Frame = 3 Query: 75 SSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTKELIA-KYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLY-GLGELPQAFARLSAVYGGTYMLNKPECKVXFDEKGKXXGVTSKGETAKCKKVVGDPSYLAK 746 SSRD+ +D+ PK + A L+ +LI + V +YL F+++ Y K+ T E + + KR KF +V ++ + +T T + + K+ L+ + + ++ L D LN + ++R++ Y S + G P + Y G GEL Q F R +AV G TY LN E V F+ K + +KV+ P+ K Sbjct: 125 SSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNW---EAQTEIWQPYAERTMSDFLGEKFKLEKPQVFELIFSIGLCYD---LNVKVPEALQRIRRYLTSFDVY-GPFPALCSKYGGPGELSQGFCRSAAVGGATYKLN--EKLVSFNPTTKVATFQDGSKVEVSEKVIISPTQAPK 341 The following BLAST results are available for this feature:
BLAST of EY735670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735670 ID=EY735670; Name=EY735670; organism=Citrus sinensis; type=EST; length=830bpback to top |