EY735650

Overview
NameEY735650
Unique NameEY735650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P1_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caenorhabditis elegans GN=gpd-1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 9.463e-35
Identity = 74/152 (48.68%), Postives = 91/152 (59.87%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKP------VTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSS 470
            M K  +GI GFGRIG LV R  + +D V++VAVNDPFI            S HG +K     V  D   L  +K       + VF  ++P  I W    A++VVESTGVFT K+KA+AHL GGAKKVI+SAPS DAPM+VVGVN   Y  S+
Sbjct:    1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKG---TVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASN 149          

HSP 2 Score: 39.2762 bits (90), Expect = 9.463e-35
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  470 NIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            ++VSNASC T+CLAPLA V++D  G   G
Sbjct:  151 HVVSNASCTTNCLAPLAKVINDNFGIIEG 179          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3PC_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Scenedesmus vacuolatus GN=GapC PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 9.477e-35
Identity = 70/134 (52.24%), Postives = 86/134 (64.18%), Query Frame = 3
Query:   60 GFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKT-LLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDY 458
            GFGRIG+LV R  L R DV++VA+NDPFI            SVHG    +E  V+ DK  +    + +    + +P +IPW E GA+YVVESTGVFT  DK  AHL GGAKKV++SAPS DAPMFV+GVN   Y
Sbjct:    2 GFGRIGSLVLRATLDRKDVKVVAINDPFIEGEYMAYMFKYDSVHG---RYEGDVQGDKHGITINGEQIKTLAMMDPTQIPWGEVGADYVVESTGVFTTVDKCQAHLKGGAKKVVISAPSADAPMFVMGVNADKY 132          

HSP 2 Score: 39.6614 bits (91), Expect = 9.477e-35
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  458 PPELNIVSNASCATSCLAPLAHVMHDKCG 544
            P +  +VSNASC T+CLAPLA V++D  G
Sbjct:  134 PKQHTVVSNASCTTNCLAPLAKVVNDTFG 162          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.173e-34
Identity = 82/178 (46.07%), Postives = 104/178 (58.43%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTLCXXXXXXXXXXXXXXXSCMTSVGIVEGRHT 566
            MGKVK+G+ GFGRIG LV R       V++VA+NDPFI            S HG + H  +K ++ K ++ G  P+T+F  R+P +I W + GAEYVVESTGVFT  +KA AHL GGAK+VI+SAPS DAPMFV+GVN   Y  S  +                    + GIVEG  T
Sbjct:    1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVINGN-PITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMT 176          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P4_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caenorhabditis elegans GN=gpd-4 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.233e-34
Identity = 74/152 (48.68%), Postives = 91/152 (59.87%), Query Frame = 3
Query:   33 MGKVKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKP------VTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSS 470
            M K  +GI GFGRIG LV R  + +D V++VAVNDPFI            S HG +K     V  D   L  +K       + VF  ++P  I W    A++VVESTGVFT K+KA+AHL GGAKKVI+SAPS DAPM+VVGVN   Y  S+
Sbjct:    1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKG---TVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASN 149          

HSP 2 Score: 38.891 bits (89), Expect = 1.233e-34
Identity = 16/29 (55.17%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  470 NIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            +++SNASC T+CLAPLA V++D  G   G
Sbjct:  151 HVISNASCTTNCLAPLAKVINDNFGIIEG 179          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.532e-34
Identity = 80/135 (59.26%), Postives = 94/135 (69.63%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVN 446
            VK+GI GFGRIG LV R  L    VE+VAVNDPFI            SVHG +K   ++ KD K ++ G KP+ VFG R+P  IPW  +GA+YVVESTGVFT  DKA+AHL GGAKKVI+SAPS DAPM+V GVN
Sbjct:    3 VKVGINGFGRIGRLVIRNALEAQGVEVVAVNDPFIPLDYMVYMFKFDSVHGRYKG-TVEAKDGKLIIAG-KPIAVFGERDPASIPWGASGADYVVESTGVFTTIDKASAHLKGGAKKVIISAPSADAPMYVCGVN 135          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.094e-34
Identity = 67/133 (50.38%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   69 RIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQS 467
            RIG LV R       V++VA+NDPFI            S HG +K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT  +KA AHL GGAK+VI+SAPS DAPMFV+GVN   Y  S
Sbjct:    1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFKG-TVKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHDKYDNS 131          

HSP 2 Score: 44.2838 bits (103), Expect = 2.094e-34
Identity = 20/30 (66.67%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  467 LNIVSNASCATSCLAPLAHVMHDKCGHCRG 556
            L IVSNASC T+CLAPLA V+HD  G  +G
Sbjct:  132 LKIVSNASCTTTCLAPLAKVIHDNFGIVKG 161          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34
Identity = 92/219 (42.01%), Postives = 118/219 (53.88%), Query Frame = 3
Query:   45 KIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTLCXXXXXXXXXXXXXXXSCMTSVGIVEGRHTRWSLCVARPHHPCRAPRWRDRLTWRGGLRPALG--PSPVGSVRGL 695
            K+GI GFGRIG +V R  L   D+++VA+NDPFI            S HG +K  +++ KD K ++ G KP++VFG R+P  IPW + GA+YVVESTGVFT  +KA+ HL GGAKKVI+SAPS DAPMFV GVN   Y     +                    + GIVEG  T      A        P  +D   WRGG   A    PS  G+ + +
Sbjct:    4 KVGINGFGRIGRIVLRNALEHGDIDVVAINDPFIDLDYMVYMFKYDSTHGRFKG-KVETKDGKLVIEG-KPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGVNLEAYKPEYEVISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHATTA-TQKTVDGPSHKD---WRGGRGAAANIIPSSTGAAKAV 216          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.823e-34
Identity = 90/202 (44.55%), Postives = 112/202 (55.45%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTLCXXXXXXXXXXXXXXXSCMTSVGIVEGRHTRWSLCVARPHHPCRAPRWRDRLTWRGG 647
            VK+GI GFGRIG +V R  L   D+E+VAVNDPFI            SVHG +K   ++VK+   ++ G +P+ VF  R+P  IPW   GA+YVVESTGVFT  DKA+AHL GGAKKV++SAPS DAPM+V GVN   Y+   T+                    + GIVEG  T      A        P  +D   WRGG
Sbjct:    2 VKVGINGFGRIGRIVLRNALQFQDIEVVAVNDPFIDLEYMAYMFKYDSVHGRFKG-TVEVKNGSFVVDG-RPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLKGGAKKVVISAPSADAPMYVCGVNLDKYNPKDTIISNASCTTNCLATLAKVIHDNFGIVEGLMTTVHATTA-TQKTVDGPSHKD---WRGG 197          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.297e-33
Identity = 81/175 (46.29%), Postives = 102/175 (58.29%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTLCXXXXXXXXXXXXXXXSCMTSVGIVEGRHT 566
            VK+G+ GFGRIG LV R  +    VE+VA+NDPFI            S HG + +  +K ++ K ++ G KP+T+F  R+P  I W E GAEYVVESTGVFT  +KA AHL GGAK+VI+SAPS DAPMFV+GVN   Y  S  +                    + GIVEG  T
Sbjct:    2 VKVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMT 174          
BLAST of EY735650 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.694e-33
Identity = 89/221 (40.27%), Postives = 118/221 (53.39%), Query Frame = 3
Query:   42 VKIGIYGFGRIGTLVARVILLRDDVELVAVNDPFIXXXXXXXXXXXXSVHGLWKHHELKVKDDKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVESTGVFTDKDKAAAHLNGGAKKVILSAPSNDAPMFVVGVNDHDYHQSSTLCXXXXXXXXXXXXXXXSCMTSVGIVEGRHTRWSLCVARPHHPCRAPRWRDRLTWRGGLRPALG---PSPVGSVRGL 695
            + IGI GFGRIG LV R+ L R D+++VAVNDPFI            S HG +K  E+  KDD  ++ G+  + VFG ++P  IPW + G +YV+ESTGVFT  + A  H++GGAKKVI++APS+DAPMFVVGVN+  Y     +                      GI EG  T     +         P  +D   WRGG R A G   PS  G+ + +
Sbjct:    3 ITIGINGFGRIGRLVLRIALQRSDIKVVAVNDPFIAPEYAAYMFKYDSTHGRYKG-EVTSKDDSLVIDGQS-IKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEGAQKHIDGGAKKVIITAPSSDAPMFVVGVNEQKYTPDLKIVSNASCTTNCLAPLAKVINDKFGIEEGLMTTVH-SITATQKTVDGPSHKD---WRGG-RTASGNIIPSSTGAAKAV 216          
The following BLAST results are available for this feature:
BLAST of EY735650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 324
Match NameE-valueIdentityDescription
G3P1_CAEEL9.463e-3548.68Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caen... [more]
G3PC_SCEVA9.477e-3552.24Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_HUMAN1.173e-3446.07Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
G3P4_CAEEL1.233e-3448.68Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caen... [more]
G3P_OMPOL1.532e-3459.26Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_MESAU2.094e-3450.38Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_CRYCU3.414e-3442.01Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P2_AGABI5.823e-3444.55Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar... [more]
G3P_MOUSE1.297e-3346.29Glyceraldehyde-3-phosphate dehydrogenase OS=Mus mu... [more]
G3P_DEBHA1.694e-3340.27Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-C06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735650 ID=EY735650; Name=EY735650; organism=Citrus sinensis; type=EST; length=861bp
CTTGCACCGGTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATC
GGAATCTACGGATTCGGAAGAATTGGTACGCTGGTGGCAAGAGTCATCTT
GCTGAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAA
CCGATTACATGACATACATGTATAAGTACGACAGTGTTCACGGTCTATGG
AAGCACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGA
GAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGATCCCATGGG
CTGAGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGAC
AAGGATAAGGCTGCTGCCCATTTGAACGGTGGTGCTAAAAAAGTTATCCT
CTCAGCCCCCAGCAACGATGCTCCTATGTTTGTTGTGGGTGTCAATGACC
ACGACTACCACCAGAGCTCAACATTGTGTCCAATGCTAGCTGCGCCACCA
GCTGCCTTGCTCCCCTTGCTCATGTCATGCATGACAAGTGTGGGCATTGT
CGAGGGTCGTCATACCCGCTGGTCACTCTGCGTCGCGCGACCCCACCACC
CCTGCCGGGCCCCTCGCTGGCGGGATCGGCTGACGTGGAGGGGCGGGTTG
CGGCCAGCGCTCGGGCCATCGCCTGTTGGTTCTGTTCGTGGTTTGGAGAG
GGGGGGTTGCTGCTGTGGTTGTTCTCGGGGGGGGTGGTGCTGGGTGCCCT
CCCTCCCCTTCCTCTCCGCGCAACGCGTCCGTCTCCCTCGCCGTGCCCGC
GGTCGTTCCTCCGCCCCGCCCGGGCCTCCCCCCAGGCGCTCGGGCGGTGG
GCGGCGGGCCG
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