EY735597

Overview
NameEY735597
Unique NameEY735597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.875e-12
Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV 242
            IP P+ E R+ IL IH   MN+ + +D++ IA + +G +GA+L+++C EAGMFA+R     VT EDFE ++
Sbjct:  321 IPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSI 391          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.173e-11
Identity = 33/81 (40.74%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   27 LIPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETE 269
            L  NP+E ++  I  IH+ +MNL   ++L+++ +  +  SGAE+KA+ +EAG+ ALRERR+ V  +DF  A   V+K + E
Sbjct:  359 LFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDE 439          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV 242
            IP P+ + RL ILKIH++ MN+   ++L +++    G +GA+L+A+C EAGMFA+R  R  V  EDF  A+
Sbjct:  321 IPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAI 391          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMA 239
            +P+PN   R  I +IH+R MN+   +D  ++A      SGA++KA+CTEAGMFA+R+ R  V  +DF+ A
Sbjct:  317 VPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQSA 386          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 3
Query:   30 IPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMS 281
            IP PNE+SR++ILKIH+  +     ID + I +   G +GA+L+ +CTEAGMFA+R  R +V  EDF  AV  + + +  ++ S
Sbjct:  307 IPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSS 390          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.532e-11
Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKET 266
            P P+ +++  I +IH+ +MNL   ++L++     +  SGA++KA+CTE+G+ ALRERR+ VT  DF+ A   V+ ++T
Sbjct:  353 PLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKT 430          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.000e-11
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 3
Query:   39 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMK 257
            P+ ESR  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV  V+K
Sbjct:  338 PDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 410          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.000e-11
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 3
Query:   39 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMK 257
            P+ ESR  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV  V+K
Sbjct:  339 PDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.000e-11
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETE 269
            P P+ ++R  I +IH+ +M L   ++L++     +  SGA++KA+CTEAG+ ALRERR+ VT  DF+ A   VM K+ E
Sbjct:  357 PLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMFKKKE 435          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.612e-11
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKE 263
            P PNEE+R  IL+IHSR+MN+   ++  ++A      +GA+LKAVC EAGM ALR     +   DF      VM K+
Sbjct:  337 PLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFVEGCVEVMAKK 413          
The following BLAST results are available for this feature:
BLAST of EY735597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PSMR_METPE6.875e-1245.07Proteasome-activating nucleotidase OS=Methanosphae... [more]
PRS4_SCHPO1.173e-1140.7426S protease regulatory subunit 4 homolog OS=Schiz... [more]
PSMR_METMJ1.532e-1145.07Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR2_HALSA1.532e-1144.29Proteasome-activating nucleotidase 2 OS=Halobacter... [more]
PS10B_ARATH1.532e-1142.8626S protease regulatory subunit S10B homolog B OS=... [more]
PRS4_DICDI1.532e-1139.7426S protease regulatory subunit 4 homolog OS=Dicty... [more]
PRS7_PRUPE2.000e-1147.9526S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH2.000e-1147.9526S protease regulatory subunit 7 homolog A OS=Ara... [more]
PRS4A_ARATH2.000e-1143.0426S proteasome regulatory subunit 4 homolog A OS=A... [more]
PRS6A_DICDI2.612e-1144.1626S protease regulatory subunit 6A homolog OS=Dict... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-F03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735597 ID=EY735597; Name=EY735597; organism=Citrus sinensis; type=EST; length=581bp
CACGCGTCCGCGAATTGACAGAAAGATTGATTCCAAATCCTAATGAAGAG
TCTCGTCTTGATATCCTAAAAATTCATTCAAGAAGAATGAATTTAATGCG
TGGCATTGATTTGAAGAAGATTGCCGAGAAGATGAATGGTGCATCTGGTG
CGGAGCTTAAGGCTGTGTGCACAGAAGCCGGTATGTTTGCTCTAAGAGAG
AGAAGGATCCATGTAACACAGGAAGATTTTGAGATGGCAGTGGCCAATGT
CATGAAGAAAGAAACAGAGAAGAACATGTCCTTGCGGAAGTTGTGGAAGN
TATCATTTCCATGTGCTGTGCTGTGTATTTGCTTANTTTCTGAGCAAGAT
TCANGTAGTCCCTTACGGCACTCACTCGTGTTCTGGGACATTTGCACGAT
AGGCCCTTTTAGCCTGACTGTTGTCTTTTCTTGCGCTCTAGCCTCCTAAT
GATAAACAAATTTGGCATCTATTTTATCTAAATTTAAATTCGCATGCAAT
TCTGGGAAACCTCAGTACCTCACTAAAATATGGAAAAGCCCGTCTGTGTC
TTGNTAGCAGCGGTACTATCATCGGTTTCCT
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