EY735586

Overview
NameEY735586
Unique NameEY735586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMA 142
            FVGDSRSSIFDAKAGIALSKK VK+V+WYDN+WGYS+RVVDLI HMA
Sbjct:  288 FVGDSRSSIFDAKAGIALSKKFVKIVAWYDNEWGYSSRVVDLIRHMA 334          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.101e-17
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKT 148
            F+GDSRSSIFDAKAGIAL+   VKLVSWYDN+WGYS+RV+DLIVHM  T
Sbjct:  291 FIGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVIDLIVHMDST 339          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 OS=Zea mays GN=GAPC1 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 7.101e-17
Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            F+GDSRSSIFDAKAGIAL+   VKLVSWYDN+WGYS RVVDLI HM KTQ
Sbjct:  288 FLGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17
Identity = 38/50 (76.00%), Postives = 46/50 (92.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            F+GD+RSSIFDAKAGI+L+   VKLVSWYDN+WGYSTRVVDLI+H++K Q
Sbjct:  288 FIGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSTRVVDLIMHISKCQ 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.274e-17
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKT 148
            FVGD+RSSIFDAKAGIAL+   +KLVSWYDN+WGYSTRVVDLI H+ KT
Sbjct:  288 FVGDNRSSIFDAKAGIALNDNFIKLVSWYDNEWGYSTRVVDLIAHIHKT 336          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.211e-16
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            F GDSRSSIFDAKAGIAL+   +KLVSWYDN+WGYS RVVDLI HM KTQ
Sbjct:  288 FTGDSRSSIFDAKAGIALNDHFIKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            F+ DSRSSIFDAKAGIALS   VKLV+WYDN+WGYS RVVDLIVHMAK
Sbjct:  290 FITDSRSSIFDAKAGIALSDTFVKLVAWYDNEWGYSNRVVDLIVHMAK 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.066e-16
Identity = 40/48 (83.33%), Postives = 45/48 (93.75%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            F+GD+RSSIFDAKAGIAL+ K VKLVSWYDN+ GYSTRVVDLIVH+AK
Sbjct:  289 FIGDTRSSIFDAKAGIALNDKFVKLVSWYDNELGYSTRVVDLIVHIAK 336          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_ATRNU (Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.698e-16
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKT 148
            FVGD+RSSIFDAKAGI L+   VKLVSWYDN+WGYS+RVVDLI HM+KT
Sbjct:  288 FVGDNRSSIFDAKAGICLNGNFVKLVSWYDNEWGYSSRVVDLIRHMSKT 336          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.524e-16
Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            F GDSRSSIFDAKAGIAL+   VKLVSWYDN+WGYSTRVVDLI HM  T+
Sbjct:  256 FQGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIRHMHSTK 305          
The following BLAST results are available for this feature:
BLAST of EY735586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
G3PC_CRAPL1.869e-1787.23Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TAXBA7.101e-1779.59Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MAIZE7.101e-1782.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR9.274e-1776.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA9.274e-1779.59Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PD_MAIZE1.211e-1680.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PHYPA1.582e-1683.33Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PEA2.066e-1683.33Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ATRNU2.698e-1679.59Glyceraldehyde-3-phosphate dehydrogenase OS=Atripl... [more]
G3PC_HORVU3.524e-1680.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-E02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735586 ID=EY735586; Name=EY735586; organism=Citrus sinensis; type=EST; length=377bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATGTGTGAAGCTTGTCTCATGGTATGACAATGATTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGGCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTAGTGCTAAC
TGGGGGGTTCCTTGGCCCGAAGATGGGGCGTCGGTGTTCCATGGAAAAGG
GTCGAAGTCTAAACTAAATGTGTCCGGAAACATTTCAGGAGCTGTACGTG
TGCTGCGGGGTTGTCCGTGAATATGCCCTTCCAGTTTGGTGAGACAGTGG
GGCGGCCACGCCGAGGGGAGCGACGGA
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