EY735586

Overview
NameEY735586
Unique NameEY735586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            +G+  SSIFDAKAGI+L+   VKLVSWYDN+WGYS RV+DL+ H+AK
Sbjct:  287 IGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYSRRVLDLLAHVAK 333          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMA 142
            FVGD+ SSIFDAKAGI LS   VKL+SWYDN++GYSTRVVDL+ ++A
Sbjct:  287 FVGDAHSSIFDAKAGIQLSPTFVKLISWYDNEFGYSTRVVDLLAYVA 333          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            +G++ SSIFD KAGI+L+K  VKLVSWYDN+WGYS RV+DL+ H+AK
Sbjct:  287 LGNTNSSIFDIKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLAHVAK 333          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 3.647e-13
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            GD  SSIFDAKAGIAL+   VKLVSWYDN+WGYS RV+DLI ++A+
Sbjct:  288 GDPHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVIDLIAYIAQ 333          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            F G + SSIFD+KAGIA+SK  VKL++WYDN+WGYS RV DL+V+ AK
Sbjct:  285 FTGANESSIFDSKAGIAISKSFVKLIAWYDNEWGYSRRVCDLLVYAAK 332          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.763e-13
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMA 142
            F+GD+ S+IFDA AGI LS K VKLV+WYDN++GYSTRVVDL+ H+A
Sbjct:  283 FLGDTHSTIFDAAAGIQLSPKFVKLVAWYDNEYGYSTRVVDLVEHVA 329          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 32/46 (69.57%), Postives = 41/46 (89.13%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            GD+ SSIFDAKAGI+L+K  VKLVSWYDN+WGYS RV+DL+ +++K
Sbjct:  288 GDNHSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLHYISK 333          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            F GDS SS FDA AGIAL+   VKLVSWYDN++GYS RVVDL+VHMA  +
Sbjct:  284 FNGDSHSSTFDAGAGIALNDNFVKLVSWYDNEFGYSNRVVDLMVHMASKE 333          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            F GDS SS FDA AGIAL+   VKLVSWYDN++GYS RVVDL+VHMA  +
Sbjct:  284 FNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEYGYSNRVVDLMVHMASKE 333          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.221e-13
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHM 139
            FVGDS SSIFDAKAGIAL+   VKL+SWYDN++GYS RVVDL+ +M
Sbjct:  359 FVGDSHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYM 404          
The following BLAST results are available for this feature:
BLAST of EY735586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
G3P_COLGL2.792e-1368.09Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P3_RHIRA2.792e-1372.34Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]
G3P2_TRIKO2.792e-1368.09Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]
G3P_MONAN3.647e-1371.74Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_SCHCO4.763e-1366.67Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]
G3P1_KLUMA4.763e-1370.21Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_SCLSC6.221e-1369.57Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_COTJA6.221e-1370.00Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn... [more]
G3P_COLLI6.221e-1370.00Glyceraldehyde-3-phosphate dehydrogenase OS=Columb... [more]
G3PT_MACFA6.221e-1373.91Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-E02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735586 ID=EY735586; Name=EY735586; organism=Citrus sinensis; type=EST; length=377bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATGTGTGAAGCTTGTCTCATGGTATGACAATGATTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGGCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTAGTGCTAAC
TGGGGGGTTCCTTGGCCCGAAGATGGGGCGTCGGTGTTCCATGGAAAAGG
GTCGAAGTCTAAACTAAATGTGTCCGGAAACATTTCAGGAGCTGTACGTG
TGCTGCGGGGTTGTCCGTGAATATGCCCTTCCAGTTTGGTGAGACAGTGG
GGCGGCCACGCCGAGGGGAGCGACGGA
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