EY735586

Overview
NameEY735586
Unique NameEY735586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.061e-12
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            G+  SSIFDAKAGI+L+   VKLVSWYDN+WGYS RV+DLI H+AK
Sbjct:  287 GNPNSSIFDAKAGISLNDHFVKLVSWYDNEWGYSRRVLDLISHVAK 332          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.061e-12
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMA 142
            F GD+ SSIFDA AGI LS + VKLVSWYDN+WGYS RVVDL+ + A
Sbjct:  286 FCGDNHSSIFDASAGIQLSPQFVKLVSWYDNEWGYSHRVVDLVAYTA 332          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.061e-12
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            F+GD+ SSIFDA AGI LS K VKLV+WYDN++GYSTRVVDL+  +AK
Sbjct:  283 FLGDTNSSIFDAAAGIQLSPKFVKLVTWYDNEYGYSTRVVDLVELVAK 330          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.386e-12
Identity = 30/46 (65.22%), Postives = 41/46 (89.13%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            G++ SSIFDAKAGI+L+K  VKL++WYDN+WGYS RV+DL+ ++AK
Sbjct:  287 GNTNSSIFDAKAGISLNKNFVKLIAWYDNEWGYSRRVLDLLAYVAK 332          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.810e-12
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKT 148
            F+GD+ SSI DA AGI L+   VKLVSWYDN++GYSTRVVDL+ H+AK+
Sbjct:  284 FLGDAHSSIVDAAAGIQLTPTFVKLVSWYDNEFGYSTRVVDLVEHVAKS 332          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.810e-12
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            F+GD+ SSIFDA AGI LS + VKLVSWYDN++GYSTRVVDL+  +AK
Sbjct:  283 FLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVAK 330          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.810e-12
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            F+GD+ SSIFDA AGI LS + VKLVSWYDN++GYSTRVVDL+  +AK
Sbjct:  283 FLGDTHSSIFDAAAGIQLSPQFVKLVSWYDNEFGYSTRVVDLVELVAK 330          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.364e-12
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            +G++ SSIFD KAGI+L+   VKLVSWYDN+WGYS RV+DL+ H+AK
Sbjct:  286 LGNNNSSIFDIKAGISLNPNFVKLVSWYDNEWGYSRRVLDLLEHVAK 332          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.364e-12
Identity = 32/46 (69.57%), Postives = 40/46 (86.96%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            G+  SSIFDAKAGI+L+K  VKLVSWYDN+WGYS RV+DLI +++K
Sbjct:  287 GNPASSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLISYISK 332          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.364e-12
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            F+G   SSIFD KAGI LS   VKL+SWYDN++GYSTRVVDL+ H+AK
Sbjct:  285 FLGSDYSSIFDQKAGILLSPTFVKLISWYDNEFGYSTRVVDLLEHVAK 332          
The following BLAST results are available for this feature:
BLAST of EY735586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
G3P_CRYPA1.061e-1271.74Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P2_SCHPO1.061e-1270.21Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schi... [more]
G3P2_KLULA1.061e-1270.83Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_CLAPU1.386e-1265.22Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]
G3P_ZYGRO1.810e-1267.35Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P3_KLUMA1.810e-1270.83Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_KLUMA1.810e-1270.83Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_TRIAT2.364e-1265.96Glyceraldehyde-3-phosphate dehydrogenase OS=Tricho... [more]
G3P_NEUCR2.364e-1269.57Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3P_DEBHA2.364e-1268.75Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-E02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735586 ID=EY735586; Name=EY735586; organism=Citrus sinensis; type=EST; length=377bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATGTGTGAAGCTTGTCTCATGGTATGACAATGATTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGGCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTAGTGCTAAC
TGGGGGGTTCCTTGGCCCGAAGATGGGGCGTCGGTGTTCCATGGAAAAGG
GTCGAAGTCTAAACTAAATGTGTCCGGAAACATTTCAGGAGCTGTACGTG
TGCTGCGGGGTTGTCCGTGAATATGCCCTTCCAGTTTGGTGAGACAGTGG
GGCGGCCACGCCGAGGGGAGCGACGGA
back to top