EY735562

Overview
NameEY735562
Unique NameEY735562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 53/145 (36.55%), Postives = 86/145 (59.31%), Query Frame = 1
Query:   67 ASKRINKELKDLQK-----------DPPASCSAATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 465
            AS+R+ KEL++++K           D     +   ++ P + P+  G F + I+FP +YPFKPPK+ F+TK++HPNI+  G +CL ++  E W PA    +V+ S+ +L+ DP P+ PL  ++A  Y  DR K+   A  +T+KY
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 53/145 (36.55%), Postives = 86/145 (59.31%), Query Frame = 1
Query:   67 ASKRINKELKDLQK-----------DPPASCSAATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 465
            AS+R+ KEL++++K           D     +   ++ P + P+  G F + I+FP +YPFKPPK+ F+TK++HPNI+  G +CL ++  E W PA    +V+ S+ +L+ DP P+ PL  ++A  Y  DR K+   A  +T+KY
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 53/145 (36.55%), Postives = 86/145 (59.31%), Query Frame = 1
Query:   67 ASKRINKELKDLQK-----------DPPASCSAATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 465
            AS+R+ KEL++++K           D     +   ++ P + P+  G F + I+FP +YPFKPPK+ F+TK++HPNI+  G +CL ++  E W PA    +V+ S+ +L+ DP P+ PL  ++A  Y  DR K+   A  +T+KY
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.672e-25
Identity = 53/145 (36.55%), Postives = 86/145 (59.31%), Query Frame = 1
Query:   67 ASKRINKELKDLQK-----------DPPASCSAATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 465
            AS+R+ KEL++++K           D     +   ++ P + P+  G F + I+FP +YPFKPPK+ F+TK++HPNI+  G +CL ++  E W PA    +V+ S+ +L+ DP P+ PL  ++A  Y  DR K+   A  +T+KY
Sbjct:    3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 55/148 (37.16%), Postives = 87/148 (58.78%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSA-----------ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 453
            S  A +R+ ++ K +++D P   SA           A I+GP+D+P+  G F + + F  +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P   ++ +L SI SL  DPNP  P   E A +++  +++Y     ET  +SW
Sbjct:    2 STPARRRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEKSW 149          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 57/148 (38.51%), Postives = 81/148 (54.73%), Query Frame = 1
Query:   58 SQMASKRINKELKDLQKDPPASCSA-----------ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE-----TTARSW 453
            S  A +R+ ++ K L  D P   S            A I GP ++PF  G F +++ F   YP KPP V F +K+FHPNI +NG +CLDIL+ +WSP   ++ +L S+ SLL DPNP  P   + A ++K +  +YE     T   SW
Sbjct:    2 STAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVKKTVELSW 149          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22
Identity = 57/145 (39.31%), Postives = 80/145 (55.17%), Query Frame = 1
Query:   70 SKRINKELKDLQKDPPASCSA-----------ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT--------DRAKYETTAR 447
            SKR+  EL +L   P    SA            TI G  D+ +    F +S+ FP DYP+KPP V F T+ FHPN+++NG+ICLDILK++WSP   +  +L+SI SLL +PN + PL    A ++          D+   E T+R
Sbjct:    8 SKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQDEYKKVLDKRYQEATSR 152          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.079e-22
Identity = 58/156 (37.18%), Postives = 89/156 (57.05%), Query Frame = 1
Query:   61 QMASKRINKELKDLQKDPPAS------CS-------AATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYETTARSWTQKYAMG*EG 483
            Q +  R+ KE K++Q++  A       C         A I GPS++P+ GGVF ++   P  YP +PP+V F TK+FHPN++   G ICLDILK  WSPA T+  V  +I +L+  P PD PL  +  ++ ++ D   + + A+ +T+  AM  +G
Sbjct:    2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21
Identity = 52/145 (35.86%), Postives = 78/145 (53.79%), Query Frame = 1
Query:   73 KRINKELKDLQKDPPASCSA-----------ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 474
            +++ KE+  L  DPP                  I GP  +P+AGG+F + +    D+P  PPK  F TK+FHPN+++NG IC+++LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y + AR  T+ +A G
Sbjct:   14 RQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQG 158          
BLAST of EY735562 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21
Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 1
Query:   73 KRINKELKDLQKDPPASCSA-----------ATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 474
            +R+ KE+  L  DPP                  I GP  +P+AGG+F + +    D+P  PPK  F TK+FHPN+++NG IC+++LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y + AR  T  +A G
Sbjct:   14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTDIHAQG 158          
The following BLAST results are available for this feature:
BLAST of EY735562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
UB2L3_PONAB7.672e-2536.55Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii... [more]
UB2L3_MOUSE7.672e-2536.55Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus... [more]
UB2L3_HUMAN7.672e-2536.55Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens... [more]
UB2L3_BOVIN7.672e-2536.55Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus G... [more]
UBC2_KLULA1.709e-2437.16Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UBC2_CRYNE2.468e-2338.51Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus ... [more]
UBE2C_DICDI1.600e-2239.31Probable ubiquitin-conjugating enzyme E2 C OS=Dict... [more]
UBC21_ARATH6.079e-2237.18Probable ubiquitin carrier protein E2 21 OS=Arabid... [more]
UBE2S_XENTR1.769e-2135.86Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropi... [more]
UB2SB_XENLA1.769e-2136.55Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus lae... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-B07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735562 ID=EY735562; Name=EY735562; organism=Citrus sinensis; type=EST; length=690bp
CCACGCGTCCGATAACACCAGACCCAAACTCTCAGGCCACAAAGTTTGTT
GAGAAATTCCCAGATGGCTTCAAAACGGATCAACAAGGAGTTGAAGGACC
TACAGAAGGACCCTCCTGCTTCTTGTAGCGCTGCAACAATTATGGGCCCA
TCAGACAGCCCATTTGCTGGGGGTGTATTTCTTGTATCCATTCATTTCCC
ACCTGATTATCCATTCAAGCCACCGAAGGTGGCCTTCCGTACTAAGGTTT
TCCACCCTAACATCAACAGCAATGGTAGCATCTGTCTTGACATTCTCAAG
GAGCAGTGGAGCCCTGCTTTGACAATATCCAAGGTACTTCTGTCAATTTG
CTCACTACTTACTGATCCGAACCCAGATGACCCACTTGTGCCTGAGATTG
CTCACATGTACAAGACTGACAGAGCCAAATATGAGACTACTGCTCGATCC
TGGACTCAGAAGTATGCCATGGGTTAAGAGGGGCTANGCTGTATGCCCCT
GAGAACATTAATGGCTTGTGGTCCTATTAGTAAATAATAGAAATAAGTTT
GTTTCAGATATTAAAAGACGATATTTGGTTTTGTTTACTAAGTTGTTAAA
AGGTTTTATGTGGGGGTTACTTTCAAATTTAGCATTGTTCTTCAATACTT
AAATTATAATTTACTGCAGAAAAAAAAAAAAAAAAAAAAA
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