EY735544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.936e-54 Identity = 106/161 (65.84%), Postives = 124/161 (77.02%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASSM+SS V T S AQA+MVAPFTGLKSSSA P T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP L++ L KE+ YLLR+ WIPC+EFELE G+V REH +PGYYDGRY TM KLP++GCTD+ VLK+V + E F+R++ Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRII 157
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_RAPSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.528e-54 Identity = 106/161 (65.84%), Postives = 123/161 (76.40%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASSM+SS V T S QA+MVAPFTGLKSS+A P T+KTN DITSIASNGGRV CMKVWPP G KKFETLSYLP LSD L KE+ YLLR+ WIPC+EFELE G+V REH +PGYYDGRY TM KLP++GCTD+ VLK+V + E +R++ Sbjct: 1 MASSMLSSAAVVT----SQLQATMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRII 157
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.528e-54 Identity = 108/161 (67.08%), Postives = 122/161 (75.78%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASSMISS V T NRA A MVAPFTGLKS + P T+KTNNDITSIASNGGRV CM+VWPP G KKFETLSYLP L D L KE+ YLLR GWIPCLEFELE G+V REH+ SP YYDGRY TM KLPM+GCTDA+ VLK++ + F+R++ Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFP-TRKTNNDITSIASNGGRVQCMQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRII 157
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.302e-54 Identity = 98/161 (60.87%), Postives = 128/161 (79.50%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++SS VA+ N AS AQASMVAPFTGLKSS+ P T+K N DIT++ASN G+V CMKVWPP GL+KFETLSYLP +S+E L KE YLLR+GW+PC+EF++ G+V RE+H SPG+YDGRY TM KLPM+GCTD++ V++++ + E F+R++ Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVI 161
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.302e-54 Identity = 108/161 (67.08%), Postives = 122/161 (75.78%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASSMISS V T NRA A MVAPFTGLKS + P T+KTNNDITSIASNGGRV CM+VWPP G KKFETLSYLP L D L KE+ YLLR GWIPCLEFELE G+V REH+ S GYYDGRY TM KLPM+GCTDA+ VLK++ + F+R++ Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGLP-TRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRII 157
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.302e-54 Identity = 105/161 (65.22%), Postives = 127/161 (78.88%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++SS VAT R + AQASMVAPFTGLKS+++ P ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YLL++GW+PCLEFE E G+V RE+H SPGYYDGRY TM KLPM+GCTDAT VL +V + +VR++ Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRII 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 3.302e-54 Identity = 107/182 (58.79%), Postives = 136/182 (74.73%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPAS 632 MASSM+SS VAT NR AQASMVAPF GLKS +A P TKK NNDITS+A+NGGRV CM+VWPP G KKFETLSYLPPLS+E+L+KE+ YLL +GW+PCLEFE G+V REH +PGYYDGRY TM KLPM+GCTD + V+ ++ + F+R++ +++ + + +A +PAS Sbjct: 1 MASSMVSSAAVATVNRTP-AQASMVAPFNGLKSVAAFPVTKK-NNDITSVATNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDN-VRQVQCISFIAYKPAS 179
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.302e-54 Identity = 105/161 (65.22%), Postives = 124/161 (77.02%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASSM+SS V T S AQA+MVAPFTGLKSS++ P T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP L+D L KE+ YLLR+ WIPC+EFELE G+V REH +PGYYDGRY TM KLP++GCTD+ VLK+V + E F+R++ Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRII 157
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.313e-54 Identity = 103/161 (63.98%), Postives = 128/161 (79.50%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++SS VAT RA+ AQASMV PFTGLKS+++ P ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+V RE++ SPGYYDGRY TM KLPM+GCTDAT VL +V + ++R++ Sbjct: 1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRII 159
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 7.356e-54 Identity = 103/161 (63.98%), Postives = 128/161 (79.50%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 MASS++SS VAT R + AQASMVAPFTGLKS+++ P ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+V RE++ SPGYYDGRY TM KLPM+GCTDAT VL +V + ++R++ Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRII 159 The following BLAST results are available for this feature:
BLAST of EY735544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735544 ID=EY735544; Name=EY735544; organism=Citrus sinensis; type=EST; length=919bpback to top |