EY735544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS1_CHLRE (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.829e-20 Identity = 63/166 (37.95%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 105 SSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEF-ELEKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHE 584 SS + A A A S V P LK PA K + + + + M VW P K FET SYLPPL+DE + ++ Y++ +GWIPCLEF E +K +V E I G YYD RY TM KLPM+GC D VL+++ +VR+V ++++ Sbjct: 8 SSVSAAVARPAR----SSVRPMAALK-----PAVK------AAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQ 158
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHI-----SPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRM 566 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ + + GYYD RY TM KLPM+GCTDA+ VL+++ + +VR+ Sbjct: 135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 241 HSP 2 Score: 97.4413 bits (241), Expect = 1.185e-19 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHI-----SPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRM 566 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ + + GYYD RY TM KLPM+GCTDA+ VL+++ + +VR+ Sbjct: 279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 385 HSP 3 Score: 97.4413 bits (241), Expect = 1.185e-19 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHI-----SPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRM 566 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ + + GYYD RY TM KLPM+GCTDA+ VL+++ + +VR+ Sbjct: 566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 672 HSP 4 Score: 97.4413 bits (241), Expect = 1.185e-19 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHI-----SPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRM 566 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ + + GYYD RY TM KLPM+GCTDA+ VL+++ + +VR+ Sbjct: 709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 815 HSP 5 Score: 97.4413 bits (241), Expect = 1.185e-19 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHI-----SPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRM 566 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ + + GYYD RY TM KLPM+GCTDA+ VL+++ + +VR+ Sbjct: 854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 960 HSP 6 Score: 97.4413 bits (241), Expect = 1.185e-19 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHI-----SPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRM 566 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ + + GYYD RY TM KLPM+GCTDA+ VL+++ + +VR+ Sbjct: 997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 1103 HSP 7 Score: 97.4413 bits (241), Expect = 1.185e-19 Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHI-----SPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRM 566 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ + + GYYD RY TM KLPM+GCTDA+ VL+++ + +VR+ Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 1247 HSP 8 Score: 95.5153 bits (236), Expect = 4.504e-19 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHI-----SPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRM 566 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ + + GYYD Y TM KLPM+GCTDA+ VL+++ + +VR+ Sbjct: 422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 528
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.449e-19 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 267 KVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFE------LEKGWVCREHHISPGYYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 KVW P K++ET SYLPPL+++ + +++ Y++ +GW PCLEF + R +S GYYD RY TM KLPM+GCTD + VL++V ++R+V Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLV 136
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS4_ACEAT (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia acetabulum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.683e-19 Identity = 56/161 (34.78%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 189 SACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 +A P + S +N R M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTD + VL ++ N ++R+V ++ + + S + P S Y P Sbjct: 20 AATPKVVTSKRSFASTVANKNRE--MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDAN-RQVQISGFLVHRPPSATDYRLP 177
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS3_ACECL (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia cliftonii GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.003e-18 Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 3 Query: 180 KSSSACPATKKTNNDITSIASNGGRVHC--MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 K + P + + ASN C M VW P K FET SYLPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTD + VL ++ ++R+V ++ + + S + P S Y P Sbjct: 14 KEVAKTPNFPRATKNNKGFASNAAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDAN-RQVQISGFLVHRPPSATDYRLP 178
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS4_ACECL (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia cliftonii GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.311e-18 Identity = 58/166 (34.94%), Postives = 81/166 (48.80%), Query Frame = 3 Query: 174 GLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 G SA P + A N R M VW P K FET SYLPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTD + VL ++ ++R+V ++ + + S + P S Y P Sbjct: 15 GCTKPSAVPKVSINRKGFLNTAMNKKRE--MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDAN-RQVQISGFLVHRPPSATDYRLP 177
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS6_ACECL (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Acetabularia cliftonii GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.920e-18 Identity = 60/195 (30.77%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 87 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSACPATKKTNNDITSIASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 MA++M+S T +++ + V+ G ++SA ++ M VW P K FET SYLPPL+DE + K++ Y+L + W PCLEF ++ + E+ I+ G Y D RY TM KLPM+GCTD + VL ++ ++R+V ++ + + S + P S Y P Sbjct: 1 MAATMMSKTIISSKQCSKPIAPPKVSINKGFVNTSAAIKNRE-----------------MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDAN-RQVQISGFLVHRPPSATDYRLP 177
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS5_ACECL (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia cliftonii GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.920e-18 Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 135 ASLAQASMVAPFTGLKSSSACPATKKTNNDITS-IASNGGRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV 569 A++ ++V G SS+ P S +A R M VW P K FET SYLPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTD + VL ++ ++R+V Sbjct: 3 AAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVAMKKSRE--MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLV 152
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS_BATOE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Batophora oerstedii GN=RBCS PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.813e-18 Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 240 SNG--GRVHCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFE-LEKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 SNG + M VW P K FET SYLPPL+D+ + K++ Y+LR+ W PCLEF ++ +V ++ + G Y D RY TM KLPM+GC D + VL ++ ++R+V ++ + + S + P S Y P Sbjct: 26 SNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDAN-RQVQISGFLVHRPESATDYRLP 170
BLAST of EY735544 vs. ExPASy Swiss-Prot
Match: RBS5_ACEAT (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia acetabulum GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.813e-18 Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = 3 Query: 264 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVCREHHISPG-----YYDGRYCTMCKLPMYGCTDATHVLKDVGDVPNE*ELTFVRMV*WEHEASECRASVGVAAEPASRRRYHAP 653 M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ I G Y D RY TM KLPM+GCTD + VL ++ N ++R+V ++ + + S + P S Y P Sbjct: 44 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDAN-RQVQISGFLVHRPPSATDYRLP 178 The following BLAST results are available for this feature:
BLAST of EY735544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735544 ID=EY735544; Name=EY735544; organism=Citrus sinensis; type=EST; length=919bpback to top |