EY735524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROMM (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9313) GN=rlmN PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.874e-12 Identity = 51/128 (39.84%), Postives = 66/128 (51.56%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 S++ P A +GK GL R +A+ EI+ QV+ R R VVFMGMGEP N++ VL AI L D I + + STVG P L ++K LA+SLHA ELRE L+ A Sbjct: 115 SSQVGCPMACRFCASGKGGLQRSLATHEIVDQVLSLREAMDRRPSHVVFMGMGEPLLNIEAVLAAIRCLNIDLGIAQRRITVSTVGVPHTLPHLAELAMKRLGRAQFTLAVSLHAPNQELRERLIPTA 242
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROM1 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain NATL1A) GN=rlmN PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.874e-12 Identity = 50/129 (38.76%), Postives = 67/129 (51.94%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQS------VKPALALSLHATRAELREHLLHQAS 386 S++ P TGK GL R + EI+ QV+ R R VVFMGMGEP N+ NVL++I L +D IG + + STVG P L + + V+ LA+SLHA LRE ++ AS Sbjct: 115 SSQIGCPMGCKFCATGKGGLNRSLDVNEIVDQVISVRETMNRRPTHVVFMGMGEPLLNIQNVLDSIECLTSDIGIGQRKITVSTVGIPNTLSDLAKLAQDRLGRVQFTLAVSLHAPNQTLRELIIPSAS 243
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_ANASP (Ribosomal RNA large subunit methyltransferase N OS=Anabaena sp. (strain PCC 7120) GN=rlmN PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.874e-12 Identity = 48/122 (39.34%), Postives = 62/122 (50.82%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLLHQA 383 ST+ P A TGK G R + EI+ QV+ + + V VVFMGMGEP N +NVL + L D IG ++L STVG L ++ LA+SLHA LRE L+ A Sbjct: 122 STQVGCPMACDFCATGKGGYKRNLERHEIVDQVLTVQEDFQQRVSHVVFMGMGEPLLNTENVLAGLRSLNQDVGIGQRSLTLSTVGIRDRISELAEHHLQVTLAVSLHAPNQALREQLIPSA 243
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_DICTD (Ribosomal RNA large subunit methyltransferase N OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rlmN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.989e-12 Identity = 41/111 (36.94%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVV-----LARRLRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDG--NIGHKNLVFSTVG-DPRVFDALPRQSVKPALALSLHATRAELREHLL 374 TG GL R + + EI+ Q++ L ++ + VV+MGMGEP N DNV+++I ++ + NIG K++ ST+G P+++ L +++K LA+SLHA+ ELR ++ Sbjct: 118 TGLIGLKRNLETHEIIGQLMVIQEDLEKKEEKISNVVYMGMGEPLANYDNVIKSIRIIKEEWGFNIGSKHITLSTIGIIPKIYQ-LAEENLKIRLAISLHASNNELRSKII 227 HSP 2 Score: 24.2534 bits (51), Expect = 1.989e-12 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDG 70 QVGC +GC+F G Sbjct: 106 QVGCPIGCKFCATG 119
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_SYNSC (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain CC9605) GN=rlmN PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.447e-12 Identity = 50/128 (39.06%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 S++ P A TGK GL R + + EI+ QV+ R R +VFMGMGEP N VLEAI L D IG + + STVG P+ L +++ LA+SLHA LRE L+ A Sbjct: 107 SSQVGCPMACRFCATGKGGLQRSLQTHEIVDQVLSVREAMDRRPSHIVFMGMGEPLLNSSAVLEAIRCLNDDLGIGQRRITVSTVGVPKTLPQLAELAMQRLGRAQFTLAVSLHAPNQRLREELIPTA 234
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROM3 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9303) GN=rlmN PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.196e-12 Identity = 50/128 (39.06%), Postives = 66/128 (51.56%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 S++ P A +GK GL R +A+ EI+ QV+ R R VVFMGMGEP N++ VL +I L D I + + STVG P L ++K LA+SLHA ELRE L+ A Sbjct: 115 SSQVGCPMACRFCASGKGGLQRSLATHEIVDQVLSLREAMDRRPSHVVFMGMGEPLLNIEAVLASIRCLNIDLGIAQRRITVSTVGVPHTLPQLAELAMKRLGRAQFTLAVSLHAPNQELRERLIPTA 242
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_MICAN (Ribosomal RNA large subunit methyltransferase N OS=Microcystis aeruginosa (strain NIES-843) GN=rlmN PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.196e-12 Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLLHQA 383 S++ P A TGK G R + + EI+ QV+ + + V VVFMGMGEP N+ V+ AI+ L D IG + L STVG P L +++ A+SLHA+ ++R L+ A Sbjct: 103 SSQVGCPMACDFCATGKGGFTRNLKAHEIVDQVLTVQEDFQQRVSHVVFMGMGEPLLNIPEVVTAIHCLNKDVGIGQRCLTISTVGLPHKIKQLAEHNLQITFAVSLHASNQQVRAKLIPSA 224
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROMA (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus GN=rlmN PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.174e-12 Identity = 55/140 (39.29%), Postives = 73/140 (52.14%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPR---------QSVKPALALSLHATRAELREHLLHQASINVP*SLV 410 S++ P TGK GL R + EI+AQV ++ R+ VVFMGMGEP N++ VL +I L D IG + + STVG V + LP+ SV+ LALSLHA +LRE L+ A N P L+ Sbjct: 110 SSQIGCPMGCQFCATGKDGLKRSLKVNEIVAQVFAVKKAFNRSPSNVVFMGMGEPLLNIEEVLSSICCLNKDLGIGQRRITVSTVG---VKNTLPQLAELALQFLGSVQFTLALSLHAPNQKLRESLIPSAQ-NYPIKLL 245
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_SYNY3 (Ribosomal RNA large subunit methyltransferase N OS=Synechocystis sp. (strain PCC 6803) GN=rlmN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.354e-12 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLLHQA 383 TGK G IR + S EI+ QV+ + V VVFMGMGEP NL V++A+ L IG + L STVG P L + ++ A+SLHA LR+ L+ A Sbjct: 122 TGKGGFIRNLESHEIVDQVLTVQEEFHERVSNVVFMGMGEPLLNLPQVVKAVECLNQVVGIGQRALTISTVGLPGKIRQLADRHLQVTFAVSLHAPNQTLRQSLIPSA 229 HSP 2 Score: 22.3274 bits (46), Expect = 4.354e-12 Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQ 73 QVGCA+ C F G+ Sbjct: 110 QVGCAMDCNFCATGK 124
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_SYNPX (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain WH8102) GN=rlmN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.451e-12 Identity = 49/128 (38.28%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 S++ P A TGK GL R + + EI+ QV+ R + R +VFMGMGEP N VL+AI L D IG + + STVG P+ L ++ LA+SLHA LRE L+ A Sbjct: 104 SSQVGCPMACRFCATGKGGLQRSLRTHEIVDQVLSVREVMDRRPSHIVFMGMGEPLLNSQAVLDAIRCLNDDLGIGQRRITVSTVGVPKTLPQLAELALATLGRAQFTLAVSLHAPNQALREELIPTA 231 The following BLAST results are available for this feature:
BLAST of EY735524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735524 ID=EY735524; Name=EY735524; organism=Citrus sinensis; type=EST; length=937bpback to top |