EY735524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROM2 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9215) GN=rlmN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 5.656e-12 Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 TGK GL R + + EIL Q++ R V +VFMGMGEP N+D++L +I + D I + + STV P++ + L +S + LA+SLHA+ ++RE ++ A Sbjct: 122 TGKEGLKRSLKASEILDQILFIENEMNRKVTNIVFMGMGEPLLNIDDLLVSIRSINKDFQISQRKITVSTVAVPKMINKLSAKSFQILGNCQFTLAISLHASNQKIRETIIPSA 235 HSP 2 Score: 23.0978 bits (48), Expect = 5.656e-12 Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQE 76 QVGC + C+F G+E Sbjct: 110 QVGCPMDCKFCATGKE 125
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_THELT (Ribosomal RNA large subunit methyltransferase N OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rlmN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.298e-12 Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLL--GTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 ST+ P TG+SG +R + + EI++Q++ + + V+ +V+MGMGEP N DNV+++I +L NIG + + STVG P + L + + LA+SLHA+ E R+ ++ Sbjct: 105 STQIGCPVKCSFCATGQSGFVRNLDAGEIVSQILAIEKDSKQTVRNIVYMGMGEPLLNYDNVIKSIKILIDKKTKNIGIRRVTLSTVGIPEMILKLSEERLDLNLAISLHASTNEKRDQII 225
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_GLOVI (Ribosomal RNA large subunit methyltransferase N OS=Gloeobacter violaceus GN=rlmN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.298e-12 Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLLHQA 383 S++ P A TG+SG R + EI+ QV+ + R V VVFMGMGEP NL V++A+ +L D IG + + STVG P L ++ LA+SLHA +LR L+ A Sbjct: 105 SSQVGCPMACRFCATGQSGFARNLGVHEIVDQVLTVQEGFGRRVSHVVFMGMGEPLLNLGAVVQALRVLNGDIGIGQRQITVSTVGVPGQIRRLGTYKLQITLAVSLHAPNQDLRLKLIPTA 226
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_CHLCH (Ribosomal RNA large subunit methyltransferase N OS=Chlorobium chlorochromatii (strain CaD3) GN=rlmN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.298e-12 Identity = 46/133 (34.59%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL-----RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDG---NIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLLHQASINVP 398 S+++ P TG GL R +++ EI Q+ L + + VVFMGMGEP N DNVLEAI + + ++ + + STVG + L R +K LA+SLH+ R E+R+ L+ A+ P Sbjct: 122 SSQAGCPMQCTFCATGTMGLQRNLSAGEIWEQLYALNGLALQEGKTITNVVFMGMGEPLLNTDNVLEAIATMSSRNYNLSLSQRKITISTVGIVPEIERLSRSGLKTKLAVSLHSARQEVRQQLMPIAAERYP 254
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_THESQ (Ribosomal RNA large subunit methyltransferase N OS=Thermotoga sp. (strain RQ2) GN=rlmN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.214e-11 Identity = 44/121 (36.36%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTD--GNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 ST+ P + TG SG +R + + EI+AQ++ R + + VV+MGMGEP N +N +++I +L GNIG + + STVG P L + + LALSLHA R+ L+ Sbjct: 106 STQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMEREEKKKIGNVVYMGMGEPLLNYENTIKSIRILNHKKMGNIGIRRITISTVGIPDRIIQLAEEGLDVKLALSLHAPTNFKRDQLV 226
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_THEM4 (Ribosomal RNA large subunit methyltransferase N OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rlmN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.214e-11 Identity = 44/121 (36.36%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRLRAVK--KVVFMGMGEPAHNLDNVLEAINLLGTDG--NIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 ST+ P TG+SG +R + EI++Q++ R +K VV+MGMGEP N +NV+++I +L NIG + + STVG P AL + LALSLHA R+ ++ Sbjct: 106 STQVGCPVKCEFCATGQSGFVRNLTVGEIVSQILAIELNRKIKVGNVVYMGMGEPLLNFENVIDSIKMLNDKKMLNIGIRRITVSTVGIPEKIIALAESGLNVKLALSLHAVTDYKRDQII 226
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_CHLTE (Ribosomal RNA large subunit methyltransferase N OS=Chlorobium tepidum GN=rlmN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.214e-11 Identity = 46/126 (36.51%), Postives = 63/126 (50.00%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLA------RRLRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDG---NIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 S++ P TG G R + + EI QV L R R + +VFMGMGEP NLDNVLE+I L +I + + STVG P D + R +K LA+SLH+ +RE ++ Sbjct: 134 SSQIGCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQKRHWRGLTNIVFMGMGEPLLNLDNVLESIGTLTEKDYQFSISERKITISTVGLPVEMDRIARSGLKTKLAISLHSADQLIRERMM 259
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_HYPNA (Ribosomal RNA large subunit methyltransferase N OS=Hyphomonas neptunium (strain ATCC 15444) GN=rlmN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.601e-11 Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRL----------RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGN---IGHKNLVFSTVG-DPRVFDALPRQSVKPALALSLHATRAELREHLL 374 TG L+R + + EI+ QV++AR R + +VFMGMGEP +NLDNV EAI+ + +DG+ IG + + ST G P++ + R LA+SLHAT +LR L+ Sbjct: 140 TGTQALVRNLTAAEIVQQVIIARDALSEWPSSIEERRLTNIVFMGMGEPLYNLDNVAEAIDTI-SDGDGMAIGRRRITVSTAGVAPKIPELGERTGA--MLAISLHATNNDLRNELV 253 HSP 2 Score: 21.1718 bits (43), Expect = 1.601e-11 Identity = 7/16 (43.75%), Postives = 9/16 (56.25%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQE 76 QVGC + C F G + Sbjct: 128 QVGCTLNCTFCHTGTQ 143
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: Y2859_RHOPS (Probable RNA methyltransferase RPD_2859 OS=Rhodopseudomonas palustris (strain BisB5) GN=RPD_2859 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.605e-11 Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRLRAVKKVVFMGMGEPAHNLDNVLEAINLL--GTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 +G++GL+R + + EI+ QVV R V ++VFMG+GEP +N VL+AI +L N + ST+G P+ L + + L +SLHAT E+R+ L+ Sbjct: 128 SGQAGLMRNLEAGEIVEQVV--RLGPKVNRIVFMGIGEPLNNYQQVLKAIRILRDRQGMNFPTTGITLSTIGIPKALKQLREEHLAINLTISLHATTQEVRDRLI 230 HSP 2 Score: 25.7942 bits (55), Expect = 1.605e-11 Identity = 10/15 (66.67%), Postives = 10/15 (66.67%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQ 73 QVGCA CRF GQ Sbjct: 116 QVGCAFACRFCASGQ 130
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROM0 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9301) GN=rlmN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.607e-11 Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 TGK GL R + EIL Q++ R V +VFMGMGEP N+D++L +I + D I + + STV P++ + L +S K LA+SLHA ++RE ++ A Sbjct: 122 TGKEGLKRSLKVSEILDQILFIENEMNRKVTNIVFMGMGEPLLNIDDLLLSIRSINEDLKISQRKITVSTVAVPKMINKLSAKSFKILGNCQFTLAVSLHAPNQKIRETIIPSA 235 HSP 2 Score: 23.0978 bits (48), Expect = 1.607e-11 Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQE 76 QVGC + C+F G+E Sbjct: 110 QVGCPMDCKFCATGKE 125 The following BLAST results are available for this feature:
BLAST of EY735524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735524 ID=EY735524; Name=EY735524; organism=Citrus sinensis; type=EST; length=937bpback to top |