EY735524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_THEMA (Ribosomal RNA large subunit methyltransferase N OS=Thermotoga maritima GN=rlmN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.705e-11 Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTD--GNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 ST+ P + TG SG +R + + EI+AQ++ + + + VV+MGMGEP N +N +++I +L GNIG + + STVG P L + + LALSLHA R+ L+ Sbjct: 106 STQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMEKEEKKKIGNVVYMGMGEPLLNYENTIKSIRILNHKKMGNIGIRRITISTVGIPDRIIQLAEEGLDVKLALSLHAPTNFKRDQLV 226
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROMS (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain AS9601) GN=rlmN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.708e-11 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLAR--RLRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 TGK GL R + + EIL Q++ R V +VFMGMGEP N+D +L +I + D I + + STV P++ L +S + LA+SLHA+ + RE ++ A Sbjct: 122 TGKEGLKRSLKASEILDQILFIEYEMNRKVTNIVFMGMGEPLLNIDELLLSIRSINNDFQISQRKITVSTVAIPKMISKLSAKSFQILSNCQFTLAISLHASNQKTRETIIPSA 235 HSP 2 Score: 23.0978 bits (48), Expect = 2.708e-11 Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQE 76 QVGC + C+F G+E Sbjct: 110 QVGCPMDCKFCATGKE 125
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROM9 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9312) GN=rlmN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.708e-11 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 TGK GL R + + EIL Q++ R V +VFMGMGEP N+D +L +I + D I + + STV P++ L +S + LA+SLHA+ + RE ++ A Sbjct: 122 TGKEGLKRSLKASEILDQILFIENEMNRKVTNIVFMGMGEPLLNIDELLLSIRSINEDFQISQRKITVSTVAVPKMMSKLSARSFQILGNCQFTLAISLHASNQKTRETIIPSA 235 HSP 2 Score: 23.0978 bits (48), Expect = 2.708e-11 Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQE 76 QVGC + C+F G+E Sbjct: 110 QVGCPMDCKFCATGKE 125
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROAC (Ribosomal RNA large subunit methyltransferase N OS=Propionibacterium acnes GN=rlmN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.498e-11 Identity = 46/117 (39.32%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRLRA----------VKKVVFMGMGEPAHNLDNVLEAINLLGTDG----NIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 TG+ G+ R +++ EI++QV+ A RL A V +VFMGMGEP N +VL AI L DG + + L STVG AL ++ + LA+SLHA ELR+ L+ Sbjct: 165 TGQGGIQRNMSTAEIVSQVLAANRLIAAGEVPGASGRVHNIVFMGMGEPMANYRSVLTAIRTLTADGPDGVGMSARALTLSTVGLVPRIKALTQEGIPVTLAVSLHAPDDELRDELI 281 HSP 2 Score: 20.4014 bits (41), Expect = 3.498e-11 Identity = 7/15 (46.67%), Postives = 8/15 (53.33%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQ 73 Q GC + C F GQ Sbjct: 153 QAGCGMACPFCATGQ 167
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_SYNR3 (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain RCC307) GN=rlmN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.533e-11 Identity = 49/128 (38.28%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 S++ P A TGK GL R + EI+ QV+ R + R VVFMGMGEP N D+VL AI+ L D + + + STVG P L +++ LA+SLHA LRE L+ A Sbjct: 105 SSQVGCPMACRFCATGKEGLQRSLEPHEIVDQVLTVREVMQRRPSHVVFMGMGEPLLNSDHVLTAIDCLSRDLGMAMRQITVSTVGVPNTLPRLAELALERLGRAQFTLAVSLHAPDQALREELIPTA 232
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PHEZH (Ribosomal RNA large subunit methyltransferase N OS=Phenylobacterium zucineum (strain HLK1) GN=rlmN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.549e-11 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLAR----------RLRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGN--IGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 TG L+R + + EI+AQV +AR R + +VFMGMGEP +NLDNV AI+++ + I + + ST G AL ++ + LA+SLHAT ELRE L+ Sbjct: 143 TGTQALVRNLTAAEIVAQVQVARDDLGEWPSPKEDRRLSNIVFMGMGEPLYNLDNVAAAIDIIADNEGIAISRRRITVSTSGVVPELAALGERT-QAMLAISLHATNDELREKLV 256 HSP 2 Score: 21.1718 bits (43), Expect = 4.549e-11 Identity = 7/16 (43.75%), Postives = 9/16 (56.25%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQE 76 QVGC + C F G + Sbjct: 131 QVGCTLNCTFCHTGTQ 146
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_SYNE7 (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus elongatus (strain PCC 7942) GN=rlmN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.559e-11 Identity = 46/111 (41.44%), Postives = 59/111 (53.15%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDP---RVFDALPRQSVKP---ALALSLHATRAELREHLL 374 TGK G R +A EI+ QV+ + + V +VFMGMGEP NLD VL AI L D IG + + STVG P R R +P LA+SLHA +R+ L+ Sbjct: 131 TGKGGFRRHLAPHEIIDQVLTVQEDWQQRVSNIVFMGMGEPLLNLDAVLAAIRCLNQDIGIGQRGITVSTVGIPGHIRRLAETKRVGDRPLQFTLAVSLHAPNQAIRDRLI 241 HSP 2 Score: 20.7866 bits (42), Expect = 4.559e-11 Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQ 73 Q+GCA+ C F G+ Sbjct: 119 QLGCAMACDFCATGK 133
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_WOLSU (Ribosomal RNA large subunit methyltransferase N OS=Wolinella succinogenes GN=rlmN PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.559e-11 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRLRAVK-----KVVFMGMGEPAHNLDNVLEAINLLG-TDG-NIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 T K G +R +++ EI+ Q+V +RL A+ +V+MGMGEP N +N+++AI +L DG +I K ST G + L + LA+SLHA ELR L+ Sbjct: 128 TAKGGFVRNLSAGEIVYQIVALKRLNALAPEKRVNIVYMGMGEPLDNFENLIQAIRILSELDGLSISTKRQTISTSGIAPKIEKLGALDLGVQLAISLHAVDDELRTRLI 237 HSP 2 Score: 24.6386 bits (52), Expect = 4.559e-11 Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 2 Query: 29 QVGCAVGCRFSF 64 QVGC VGC F F Sbjct: 116 QVGCKVGCSFCF 127
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_SYNP6 (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rlmN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.563e-11 Identity = 46/111 (41.44%), Postives = 59/111 (53.15%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDP---RVFDALPRQSVKP---ALALSLHATRAELREHLL 374 TGK G R +A EI+ QV+ + + V +VFMGMGEP NLD VL AI L D IG + + STVG P R R +P LA+SLHA +R+ L+ Sbjct: 121 TGKGGFRRHLAPHEIIDQVLTVQEDWQQRVSNIVFMGMGEPLLNLDAVLAAIRCLNQDIGIGQRGITVSTVGIPGHIRRLAETKRVGDRPLQFTLAVSLHAPNQAIRDRLI 231 HSP 2 Score: 20.7866 bits (42), Expect = 4.563e-11 Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQ 73 Q+GCA+ C F G+ Sbjct: 109 QLGCAMACDFCATGK 123
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_AZOC5 (Ribosomal RNA large subunit methyltransferase N OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rlmN PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 5.894e-11 Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLAR-RL-------------------RAVKKVVFMGMGEPAHNLDNVLEAINLL--GTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 TG L+R + + EI+AQV++AR RL R V +VFMGMGEP + D+V EAI +L G +G + + ST G + L R+ V P LA+SLHA R +LR+ L+ Sbjct: 150 TGTQRLVRNLTAAEIVAQVLVARDRLGDYPGRERAVGPGLPTEGDRLVTNIVFMGMGEPLYAYDSVAEAIEILADGDGLGLGKRRITVSTSGVVPEIEKLGRE-VGPMLAISLHAVRDDLRDVLV 273 HSP 2 Score: 23.0978 bits (48), Expect = 5.894e-11 Identity = 8/17 (47.06%), Postives = 10/17 (58.82%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQER 79 QVGC + C F G +R Sbjct: 138 QVGCTLNCAFCHTGTQR 154 The following BLAST results are available for this feature:
BLAST of EY735524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735524 ID=EY735524; Name=EY735524; organism=Citrus sinensis; type=EST; length=937bpback to top |