EY735524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_GEOSL (Ribosomal RNA large subunit methyltransferase N OS=Geobacter sulfurreducens GN=rlmN PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 5.917e-11 Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 63 LTGKSGLIRQVASMEILAQVVLARRLRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNI--GHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 LTG L R + + EI+ QV +R V+ +VFMGMGEP NLDNV+ A+ ++ D + + + ST G + L R SV LA+SL+AT ELR+ ++ Sbjct: 121 LTGTFRLTRNLTTAEIVNQVCAVQRDVPVRNIVFMGMGEPLANLDNVIRALQIMLHDDGLQFSTRRITVSTAGLVPEMERLGR-SVTVNLAVSLNATTDELRDRIM 225 HSP 2 Score: 23.483 bits (49), Expect = 5.917e-11 Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQER 79 QVGCA+ C F G R Sbjct: 110 QVGCAMACEFCLTGTFR 126
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_THEP1 (Ribosomal RNA large subunit methyltransferase N OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rlmN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11 Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTD--GNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 ST+ P + TG SG +R + + EI+AQ++ + + + VV+MGMGEP N +N +++I L GNIG + + STVG P L + + LALSLHA R+ L+ Sbjct: 106 STQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMEKEEKKKIGNVVYMGMGEPLLNYENTIKSIRTLNHKKMGNIGIRRITISTVGIPDRIIQLAEEGLDVKLALSLHAPTNFKRDQLV 226
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_SYNWW (Ribosomal RNA large subunit methyltransferase N OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rlmN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11 Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVV-----LARRLRA-----VKKVVFMGMGEPAHNLDNVLEAINLLGTDG--NIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 ST+ P A TG+SG R + + EI+ Q + L++RL++ + VV+MGMGEP N D V++++++L N+G + + ST G+ L +++++ LA+SLHA LR+ L+ Sbjct: 114 STQVGCPIACSFCATGQSGFQRNLKAFEIIGQYLGSKKELSKRLKSPRAELISNVVYMGMGEPLLNYDEVIKSVHMLNDPRGINLGQRRITISTSGEVAGIKKLAQENIQLTLAISLHACDNSLRDQLI 242
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_SYNFM (Ribosomal RNA large subunit methyltransferase N OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rlmN PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 7.694e-11 Identity = 51/153 (33.33%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 63 LTGKSGLIRQVASMEILAQVVLARR----LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNI--GHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLLHQASINVP*SLVWIWVNMLCQREPSIPNRKNEGHLILIQDNVD 503 LTG G R +++ EI+ QV +R + +VFMGMGEP NLD+VL AI ++ + H+ + ST G L R+S LA+SLHA ELR L+ + P + V M RE +P RK ++ D ++ Sbjct: 120 LTGSLGFKRNLSAAEIVDQVCQVQRDLGSRSRITNIVFMGMGEPLANLDSVLRAIRVIAEPNGMAFSHRRITLSTAGLVPQLRRLGRES-PVNLAVSLHAAENELRAELM-PVNRTYP-----LEVLMAACREYPLPPRKRITFEYILLDGIN 265 HSP 2 Score: 26.1794 bits (56), Expect = 7.694e-11 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDG 70 QVGCA+GC+F G Sbjct: 109 QVGCALGCKFCLTG 122
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_THENN (Ribosomal RNA large subunit methyltransferase N OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rlmN PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11 Identity = 43/121 (35.54%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 24 STKSAAPWAVVSRLTGKSGLIRQVASMEILAQVVLARRLRAVK--KVVFMGMGEPAHNLDNVLEAINLLGTD--GNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 ST+ P TG SG +R + + EI++Q++ + K VV+MGMGEP N +N +++I +L GNIG + + STVG P L + + LALSLHA R+ L+ Sbjct: 106 STQVGCPVGCTFCATGMSGFVRNLTTGEIVSQILSMEKEEGKKIGNVVYMGMGEPLLNYENTIKSIRILNHKKMGNIGIRRITISTVGIPEKIIQLADEGLDVKLALSLHAPTNFKRDQLV 226
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: Y6963_RHOBA (Probable RNA methyltransferase RB6963 OS=Rhodopirellula baltica GN=RB6963 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.952e-11 Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRL-----RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGH--KNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 TGK G+ + +A+ EIL QVV A ++ R + +VFMGMGEP HN NV EAI LL + ++ STVG P L ++ LALSLH+ RE ++ Sbjct: 119 TGKMGIAKNLATEEILDQVVQAGQILRGEDRRLSNIVFMGMGEPLHNEVNVTEAIELLTAPDHFARSPSTVLVSTVGVPAGMLRLAKRFPNLNLALSLHSADQTTREKII 228 HSP 2 Score: 21.1718 bits (43), Expect = 9.952e-11 Identity = 7/15 (46.67%), Postives = 9/15 (60.00%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQ 73 Q+GCA C F G+ Sbjct: 107 QIGCAAACDFCATGK 121
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_HELPY (Ribosomal RNA large subunit methyltransferase N OS=Helicobacter pylori GN=rlmN PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 9.972e-11 Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARR-----LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 T K G +R + + EI+ Q +L + L +VFMGMGEP +NLD V +AI + T I K + ST G L +++ LA+SLHA + R L+ Sbjct: 132 TQKGGFVRNLKASEIIQQALLIKEDNNLPLEKALNIVFMGMGEPLNNLDEVCKAIEIFNTGMQISPKRITISTSGVADKIPILAGKNLGVQLAISLHAVDDKTRSSLM 239 HSP 2 Score: 24.2534 bits (51), Expect = 9.972e-11 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 2 Query: 29 QVGCAVGCRFSF 64 Q+GC VGC F F Sbjct: 120 QIGCQVGCSFCF 131
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_HELAH (Ribosomal RNA large subunit methyltransferase N OS=Helicobacter acinonychis (strain Sheeba) GN=rlmN PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 9.975e-11 Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARR-----LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 T K G +R + + EI+ Q +L + + +VFMGMGEP +NLD V +AI + T I K + ST G L +++ LA+SLHA + R L+ Sbjct: 132 TQKGGFVRNLKASEIIQQALLIKEDNNLPIEKALNIVFMGMGEPLNNLDEVCKAIEIFNTGMQISPKRITISTSGVADKIPILAEKNLGVQLAISLHAVDDKTRSSLI 239 HSP 2 Score: 24.2534 bits (51), Expect = 9.975e-11 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 2 Query: 29 QVGCAVGCRFSF 64 Q+GC VGC F F Sbjct: 120 QIGCQVGCSFCF 131
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_PROMP (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rlmN PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 9.981e-11 Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 3 Query: 66 TGKSGLIRQVASMEILAQVVLARRL--RAVKKVVFMGMGEPAHNLDNVLEAINLLGTDGNIGHKNLVFSTVGDPRVFDALPRQSVKP------ALALSLHATRAELREHLLHQA 383 TGK GL R + EIL Q++ + V +VFMGMGEP N+D +L +I + D I + + STV P++ L S + LA+SLHA+ ++RE ++ A Sbjct: 122 TGKEGLKRSLKVSEILDQILFIENQMNQKVSNIVFMGMGEPLLNIDELLLSIRSINEDFAISQRKITVSTVAIPKMISKLSELSFQVLGKCQFTLAISLHASNQKIREAIIPSA 235 HSP 2 Score: 23.0978 bits (48), Expect = 9.981e-11 Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 2 Query: 29 QVGCAVGCRFSFDGQE 76 QVGC + C+F G+E Sbjct: 110 QVGCPMDCKFCATGKE 125
BLAST of EY735524 vs. ExPASy Swiss-Prot
Match: RLMN_CLONN (Ribosomal RNA large subunit methyltransferase N OS=Clostridium novyi (strain NT) GN=rlmN PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 9.987e-11 Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 78 GLIRQVASMEILAQVVLARR--LRAVKKVVFMGMGEPAHNLDNVLEAINLLGTDG--NIGHKNLVFSTVGDPRVFDALPRQSVKPALALSLHATRAELREHLL 374 G++R + S EI+AQV+ A++ + VV MG GEP N DNV++ + L+ + NIG +++ ST G L Q ++ LA+SLHA E+R+ ++ Sbjct: 124 GVVRNLTSGEIIAQVLKAQKEICDRISNVVLMGSGEPLDNYDNVIKFLKLINDEDALNIGQRHITLSTCGIVPKIKELADQKMQITLAISLHAPNNEIRKSMM 226 HSP 2 Score: 23.0978 bits (48), Expect = 9.987e-11 Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 2 Query: 29 QVGCAVGCRF---SFDGQERPDPSG 94 Q+GC +GC+F + DG R SG Sbjct: 108 QIGCRMGCKFCASTVDGVVRNLTSG 132 The following BLAST results are available for this feature:
BLAST of EY735524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735524 ID=EY735524; Name=EY735524; organism=Citrus sinensis; type=EST; length=937bpback to top |