EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_LEGPA (L-threonine 3-dehydrogenase OS=Legionella pneumophila (strain Paris) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 48/127 (37.80%), Postives = 63/127 (49.61%), Query Frame = 1
Query:   88 IQPYHLPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +Q   +P  G  DV ++IK   ICG D+H +     A   +  PM +GHE  G I EVG EV  L+VG R + E  I CG C  C+AG   LC     VG     G  A  +  PA     LPD+++
Sbjct:   15 MQDIPVPEYGVNDVLIKIKRTAICGTDIHIYSWDEWAQATIPVPMTVGHEFYGEIVEVGKEVQGLKVGQRVSGEGHITCGFCRNCRAGKRHLCRNTLGVG-VNRPGCFAEYLALPATNVIALPDNIT 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_BURVG (L-threonine 3-dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  DV ++I+   ICG D+H +K    A   +  PM +GHE  G I E+G EV    +GDR + E  I CG C  C+AG   LC     VG     G+ A  +  PA   +K+P ++S
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVG-VNREGAFAEYLAIPAFNAFKIPPEIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_BURS3 (L-threonine 3-dehydrogenase OS=Burkholderia sp. (strain 383) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  DV ++I+   ICG D+H +K    A   +  PM +GHE  G I E+G EV    +GDR + E  I CG C  C+AG   LC     VG     G+ A  +  PA   +K+P ++S
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVG-VNREGAFAEYLAIPAFNAFKIPPEIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_BURM1 (L-threonine 3-dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  DV ++I+   ICG D+H +K    A   +  PM +GHE  G I E+G EV    +GDR + E  I CG C  C+AG   LC     VG     G+ A  +  PA   +K+P ++S
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVG-VNREGAFAEYLAIPAFNAFKIPPEIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_BURCJ (L-threonine 3-dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  DV ++I+   ICG D+H +K    A   +  PM +GHE  G I E+G EV    +GDR + E  I CG C  C+AG   LC     VG     G+ A  +  PA   +K+P ++S
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVG-VNREGAFAEYLAIPAFNAFKIPPEIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_BURCH (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  DV ++I+   ICG D+H +K    A   +  PM +GHE  G I E+G EV    +GDR + E  I CG C  C+AG   LC     VG     G+ A  +  PA   +K+P ++S
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVG-VNREGAFAEYLAIPAFNAFKIPPEIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_BURCC (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  DV ++I+   ICG D+H +K    A   +  PM +GHE  G I E+G EV    +GDR + E  I CG C  C+AG   LC     VG     G+ A  +  PA   +K+P ++S
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVG-VNREGAFAEYLAIPAFNAFKIPPEIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_BURCA (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  DV ++I+   ICG D+H +K    A   +  PM +GHE  G I E+G EV    +GDR + E  I CG C  C+AG   LC     VG     G+ A  +  PA   +K+P ++S
Sbjct:   21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVG-VNREGAFAEYLAIPAFNAFKIPPEIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_MESSB (L-threonine 3-dehydrogenase OS=Mesorhizobium sp. (strain BNC1) GN=tdh PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.450e-15
Identity = 46/121 (38.02%), Postives = 61/121 (50.41%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            LP +GP DV ++++   ICG DVH +     A   V  P+V GHE  G + +VGS V    +G R + E  I CGHC  C+AG   LC     VG     G+ A  +  P      +PDDV
Sbjct:   24 LPEIGPNDVLIKVRKAAICGTDVHIWNWDEWARKTVPVPLVTGHEFVGEVVDVGSAVTEYRIGQRVSGEGHIVCGHCRNCRAGRGHLCRNTLGVG-VHRPGAFAEYISLPQHNVVAIPDDV 143          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_THEON (Probable L-threonine 3-dehydrogenase OS=Thermococcus onnurineus (strain NA1) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +P  GP +V +++ A  ICG D+H ++    A   +K P ++GHE AG + EVG  V+++ VGD  + E  I CG C  CK   Y +C   +  G    +G  A   + PA+  +K P D+
Sbjct:   24 IPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVIEVGPGVDTINVGDYISAETHIVCGKCYACKHNRYHVCQNTKIFG-VDMDGVFAEYAIVPAQNAWKNPKDM 143          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
TDH_LEGPA1.876e-1537.80L-threonine 3-dehydrogenase OS=Legionella pneumoph... [more]
TDH_BURVG1.876e-1537.19L-threonine 3-dehydrogenase OS=Burkholderia vietna... [more]
TDH_BURS31.876e-1537.19L-threonine 3-dehydrogenase OS=Burkholderia sp. (s... [more]
TDH_BURM11.876e-1537.19L-threonine 3-dehydrogenase OS=Burkholderia multiv... [more]
TDH_BURCJ1.876e-1537.19L-threonine 3-dehydrogenase OS=Burkholderia cepaci... [more]
TDH_BURCH1.876e-1537.19L-threonine 3-dehydrogenase OS=Burkholderia cenoce... [more]
TDH_BURCC1.876e-1537.19L-threonine 3-dehydrogenase OS=Burkholderia cenoce... [more]
TDH_BURCA1.876e-1537.19L-threonine 3-dehydrogenase OS=Burkholderia cenoce... [more]
TDH_MESSB2.450e-1538.02L-threonine 3-dehydrogenase OS=Mesorhizobium sp. (... [more]
TDH_THEON3.200e-1534.71Probable L-threonine 3-dehydrogenase OS=Thermococc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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