EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_RHIME (L-threonine 3-dehydrogenase OS=Rhizobium meliloti GN=tdh PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 48/121 (39.67%), Postives = 62/121 (51.24%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +P +GP DV +R++   ICG DVH +     A   +  PMV+GHE  G + EVG  V+   VG+R + E  I CG C  C+AG   LC     VG     GS A  V  P      +PDDV
Sbjct:   24 VPEIGPNDVLIRVRKSAICGTDVHIWNWDQWAEKTIPVPMVVGHEFMGEVVEVGPAVSKHHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVG-VNRPGSFAEFVCLPEYNVVSIPDDV 143          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_PSYIN (L-threonine 3-dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 45/121 (37.19%), Postives = 62/121 (51.24%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P  G  D+ ++I    ICG D+H +     +   +  PMV+GHE  G +  +G EV    VGDR + E  I CGHC  C+AG   LC     VG   T G+ A  +V PA   +K+P  +S
Sbjct:   23 PEPGHNDLLIKIHKTAICGTDIHIYNWDEWSQNTIPVPMVVGHEYVGEVVGMGQEVRGFSVGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRT-GAFAEYLVIPAFNAFKIPAGIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_FRATW (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P  G  DV ++IK   ICG D+H +     +   +  PM+ GHE AG +   G  V S+++GDR + E  + CG C  C+AG   LC +   +G     G+ A  +V PA   +K+PD +S
Sbjct:   21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSIS 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_FRATT (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P  G  DV ++IK   ICG D+H +     +   +  PM+ GHE AG +   G  V S+++GDR + E  + CG C  C+AG   LC +   +G     G+ A  +V PA   +K+PD +S
Sbjct:   21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSIS 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_FRATO (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P  G  DV ++IK   ICG D+H +     +   +  PM+ GHE AG +   G  V S+++GDR + E  + CG C  C+AG   LC +   +G     G+ A  +V PA   +K+PD +S
Sbjct:   21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSIS 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_FRATN (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. novicida (strain U112) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P  G  DV ++IK   ICG D+H +     +   +  PM+ GHE AG +   G  V S+++GDR + E  + CG C  C+AG   LC +   +G     G+ A  +V PA   +K+PD +S
Sbjct:   21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSIS 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_FRATM (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P  G  DV ++IK   ICG D+H +     +   +  PM+ GHE AG +   G  V S+++GDR + E  + CG C  C+AG   LC +   +G     G+ A  +V PA   +K+PD +S
Sbjct:   21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSIS 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_FRATH (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P  G  DV ++IK   ICG D+H +     +   +  PM+ GHE AG +   G  V S+++GDR + E  + CG C  C+AG   LC +   +G     G+ A  +V PA   +K+PD +S
Sbjct:   21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSIS 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_FRATF (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P  G  DV ++IK   ICG D+H +     +   +  PM+ GHE AG +   G  V S+++GDR + E  + CG C  C+AG   LC +   +G     G+ A  +V PA   +K+PD +S
Sbjct:   21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSIS 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_FRAT1 (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.200e-15
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P  G  DV ++IK   ICG D+H +     +   +  PM+ GHE AG +   G  V S+++GDR + E  + CG C  C+AG   LC +   +G     G+ A  +V PA   +K+PD +S
Sbjct:   21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIG-VNVQGAFAEYLVMPAVNVFKIPDSIS 141          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
TDH_RHIME3.200e-1539.67L-threonine 3-dehydrogenase OS=Rhizobium meliloti ... [more]
TDH_PSYIN3.200e-1537.19L-threonine 3-dehydrogenase OS=Psychromonas ingrah... [more]
TDH_FRATW3.200e-1535.25L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATT3.200e-1535.25L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATO3.200e-1535.25L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATN3.200e-1535.25L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATM3.200e-1535.25L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATH3.200e-1535.25L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRATF3.200e-1535.25L-threonine 3-dehydrogenase OS=Francisella tularen... [more]
TDH_FRAT13.200e-1535.25L-threonine 3-dehydrogenase OS=Francisella tularen... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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