EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: XYL2_PICST (D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.096e-21
Identity = 56/140 (40.00%), Postives = 74/140 (52.86%), Query Frame = 1
Query:   73 IKTLKIQPYHLPTLG-PQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFV-------GSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            I  +  + Y  P +  P DV V++K  GICG+D+H +      NF++ KPMV+GHE AG + +VG  V SL+VGD  A+E GI        K+G+Y LCP M F        G P   G+L      P     KLPD VS
Sbjct:   12 IDDISFETYDAPEISEPTDVLVQVKKTGICGSDIHFYAHGRIGNFVLTKPMVLGHESAGTVVQVGKGVTSLKVGDNVAIEPGIPSRFSDEYKSGHYNLCPHMAFAATPNSKEGEPNPPGTLCKYFKSPEDFLVKLPDHVS 151          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_DEIDV (L-threonine 3-dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=tdh PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +P  GP D+ +R+K   ICG DVH +K    A   +  PMV+GHE  G++  +GSEV    VGDR + E  + CGHC  C+AG   LC     VG     GS A  +V PA   +KLPDD+
Sbjct:   20 VPRPGPNDLLIRVKKGSICGTDVHIYKWDEWAQKTIPVPMVVGHEYVGVVAAMGSEVRGFNVGDRVSGEGHVTCGHCRNCRAGRRHLCRNTLGVG-VNRPGSFAEYLVLPAFNAFKLPDDI 139          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEB9 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS195) GN=tdh PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.230e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEB8 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS185) GN=tdh PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.230e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEB5 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tdh PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.230e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEB2 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS223) GN=tdh PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.230e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_MARMS (L-threonine 3-dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=tdh PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.230e-19
Identity = 48/121 (39.67%), Postives = 69/121 (57.02%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P  G  DV ++I    ICG D+H ++    A   +  PM +GHE  G+I EVG EV+  ++GDR + E  I CGHC  C+AG   LC +   VG   T G+ A  +V PA   +K+P+++S
Sbjct:   21 PDCGHNDVVIKISKTAICGTDMHIYQWDDWAQNTIPVPMTVGHEFVGVITEVGPEVSGFKIGDRVSGEGHITCGHCRNCRAGRRHLCRKTLGVGVNRT-GAFAEYLVIPASNAFKIPNNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHESW (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.136e-19
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV    +GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFNIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHESR (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-7) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.136e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHESM (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain MR-4) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.136e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
XYL2_PICST5.096e-2140.00D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE... [more]
TDH_DEIDV1.483e-2042.98L-threonine 3-dehydrogenase OS=Deinococcus deserti... [more]
TDH_SHEB96.230e-1938.84L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEB86.230e-1938.84L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEB56.230e-1938.84L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEB26.230e-1938.84L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_MARMS6.230e-1939.67L-threonine 3-dehydrogenase OS=Marinomonas sp. (st... [more]
TDH_SHESW8.136e-1938.84L-threonine 3-dehydrogenase OS=Shewanella sp. (str... [more]
TDH_SHESR8.136e-1938.84L-threonine 3-dehydrogenase OS=Shewanella sp. (str... [more]
TDH_SHESM8.136e-1938.84L-threonine 3-dehydrogenase OS=Shewanella sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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