EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SACEN (L-threonine 3-dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tdh PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.941e-12
Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHP 432
            PT G  D+ V++   GICG D+H       A   V  P+VIGHE AG +  VGS V   +VGD  + E  + CG C  C+AG   LC   R +G    NG+ A   V P
Sbjct:   21 PTPGANDIVVQVFRTGICGTDLHIDSWDEWAARTVPTPLVIGHEFAGEVVAVGSAVTQAQVGDFVSGEGHLVCGTCRNCRAGRRHLCANTRGLG-VHHNGAFAEYAVLP 128          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SILPO (L-threonine 3-dehydrogenase OS=Silicibacter pomeroyi GN=tdh PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.535e-12
Identity = 43/121 (35.54%), Postives = 62/121 (51.24%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +P +GP DV ++IK  GICG D+H +     A   V  PM+ GHE AG I E+G +V  L +G R + E  +        +AG + L P  R +G     G+ A  +  PA     LP+D+
Sbjct:   20 VPEIGPDDVLIKIKKTGICGTDIHIWNWDEWAAHTVPVPMITGHEFAGEIVELGRDVTGLSIGQRVSGEGHLIGTESRQSRAGKFHLDPGTRGIG-VNVQGAFAQYLRLPAFNVVPLPEDI 139          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_BACLD (L-threonine 3-dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tdh PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.535e-12
Identity = 40/118 (33.90%), Postives = 60/118 (50.85%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLP 456
            +P +   +V +++KA  ICG DVH +     A   VK P V GHE +G + +VG  V +++ G+  + E  I CG C  C  G   +C +   +G   T+G  A  V  PA   +K P
Sbjct:   24 IPKIDKHEVLIKVKAASICGTDVHIYNWDEWAKSRVKPPYVFGHEFSGEVVQVGENVTTVKEGEYVSAETHIVCGKCLPCLTGKEHVCKKTLILG-VDTDGCFAEYVKMPAANIWKNP 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_STRAW (L-threonine 3-dehydrogenase OS=Streptomyces avermitilis GN=tdh PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.311e-12
Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPA 435
            P +GP DV +++   GICG D+H       A   V+ P+V+GHE  G + E G +V  ++ GDR + E  + CG C  C+AG   LC     +G    +G+ A  V  PA
Sbjct:   21 PEIGPGDVLIKVLRTGICGTDLHIRSWDGWAQQAVRTPLVLGHEFVGEVVETGRDVVDIKAGDRVSGEGHLVCGKCRNCQAGRRHLCRATVGLG-VGRDGAFAEYVALPA 129          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.311e-12
Identity = 48/135 (35.56%), Postives = 68/135 (50.37%), Query Frame = 1
Query:   76 KTLKIQPYHLPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKK--PMVIGHECAGIIKEVGSEVNSLEVGDR-GALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVSF 471
            K L+++    P +   +V VRIKA G+C  D+H        ++ VK   P++ GHE  G+I+EVG  V  L+VGDR G       CGHC  C +G   LC   +  G    +G  A      A    K+PD++SF
Sbjct:   11 KPLQVKEVEKPKISYGEVLVRIKACGVCHTDLH----AAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGY-SVDGGYAEYCRAAADYVVKIPDNLSF 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: IDND_ECOLI (L-idonate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnD PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.324e-12
Identity = 39/112 (34.82%), Postives = 55/112 (49.11%), Query Frame = 1
Query:  133 VRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGS----PPTNGSLAHNVVHPAKLCYKLP 456
            V+I   GICG+D+H+++     NF++K PMV+GHE  G  K + S+ + L  G   A+     CGHC  C   N   C +MRF GS    P  +G      +     C   P
Sbjct:   32 VQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIG--KVIHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTDMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYP 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SOLUE (L-threonine 3-dehydrogenase OS=Solibacter usitatus (strain Ellin6076) GN=tdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12
Identity = 39/94 (41.49%), Postives = 48/94 (51.06%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVG 387
            P +G  DV +R+   GICG DVH +K    A   +  PM IGHE  G I+ VGS V     GD  + E  + CG C  C AG   LC +   VG
Sbjct:   21 PAIGINDVLIRVLRTGICGTDVHIYKWDEWARETIHVPMAIGHEFVGRIEAVGSNVADFFPGDIVSGEGHVVCGRCRNCFAGRRHLCAKTMGVG 114          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.258e-11
Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 1
Query:   97 YHLPTLGPQDVKVRIKALGICGNDVHHFKT-MTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGIN-CGHCTLCKAGNYKLCPEM------RFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            Y L   GP+DV +RI   GIC  D+H  K  +  +N+    PMV GHE  G + EVGS+V+   VGD   +   +  CG C+ C+    + CP+        ++   PT G  A   V   K   K+P+ ++
Sbjct:   27 YTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNY----PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMA 154          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: Y053_HAEIN (Uncharacterized zinc-type alcohol dehydrogenase-like protein HI0053 OS=Haemophilus influenzae GN=HI0053 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.643e-11
Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = 1
Query:   82 LKIQPYHLPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNS-LEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +K  PY  P     DV ++++++GICG+D+  ++     N +V  P ++GHE  G + E G  ++  + VGDR  ++  + CG C  C  G    C  ++ +G    +G +   + HPA L  K+PD++
Sbjct:   18 VKEVPY--PEKSDNDVLIQVESMGICGSDIGAYRG---TNPLVTYPRILGHEIVGRVIESGIGMSDGVRVGDRVIVDPYVCCGQCYPCSIGRTNCCESLKVIG-VHIDGGMQEVIRHPAHLLTKVPDNL 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_STRCO (L-threonine 3-dehydrogenase OS=Streptomyces coelicolor GN=tdh PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.643e-11
Identity = 38/110 (34.55%), Postives = 57/110 (51.82%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPA 435
            PT+G  DV +++   GICG D+H       A   ++ P+V+GHE  G + + G +V  ++ GDR + E  + CG C  C AG   LC     +G    +G+ A  V  PA
Sbjct:   21 PTIGSGDVLIKVLRTGICGTDLHIRAWDGWAQQAIRTPLVVGHEFVGEVVDTGRDVTDIKAGDRVSGEGHLVCGKCRNCLAGRRHLCRATVGLG-VGRDGAFAEYVALPA 129          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
TDH_SACEN1.941e-1240.37L-threonine 3-dehydrogenase OS=Saccharopolyspora e... [more]
TDH_SILPO2.535e-1235.54L-threonine 3-dehydrogenase OS=Silicibacter pomero... [more]
TDH_BACLD2.535e-1233.90L-threonine 3-dehydrogenase OS=Bacillus lichenifor... [more]
TDH_STRAW3.311e-1236.36L-threonine 3-dehydrogenase OS=Streptomyces avermi... [more]
ADH1_BACST3.311e-1235.56Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
IDND_ECOLI4.324e-1234.82L-idonate 5-dehydrogenase OS=Escherichia coli (str... [more]
TDH_SOLUE5.648e-1241.49L-threonine 3-dehydrogenase OS=Solibacter usitatus... [more]
CADH5_ARATH1.258e-1133.33Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
Y053_HAEIN1.643e-1130.23Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
TDH_STRCO1.643e-1134.55L-threonine 3-dehydrogenase OS=Streptomyces coelic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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