EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.661e-11
Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = 1
Query:   97 YHLPTLGPQDVKVRIKALGICGNDVHHFKT-MTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGI-NCGHCTLCKAGNYKLCPEM------RFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            Y L   GPQDV V +   GIC  DVH  K  +  +N+    PMV GHE  G + EVGSEV     GD   +   + +CG+C  C +   + C +        +    PT G  A  +V   K   K+PD ++
Sbjct:   27 YTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNY----PMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMA 154          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_STRGG (L-threonine 3-dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=tdh PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.781e-11
Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPA 435
            P  GP DV +++   GICG D+H       A   V  P+++GHE  G +  +GS+V  +  GD  + E  + CG C  C AG   LC     +G    +G+ A  VV PA
Sbjct:   21 PEYGPTDVLIKVLRTGICGTDLHIRAYDGWAQQAVTTPLILGHEFVGEVAAIGSDVADIATGDLVSGEGHLVCGKCRNCLAGRRHLCRSTVGLG-VGRDGAFAEYVVLPA 129          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: YJMD_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjmD OS=Bacillus subtilis GN=yjmD PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = 1
Query:  106 PTLGPQD-VKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            P L   D V V++K +GICG+D+H +      N +   P VIGHE  G ++ VG+ V SL+ GD   +E    CG C  C+ G   +C ++   G    +G +   +V P +  + +  D+
Sbjct:   20 PVLSKDDEVLVKVKRVGICGSDMHIYHG---TNPLATLPRVIGHEVTGQVEAVGANVQSLKPGDHVVIEPISYCGSCYACRKGRPNVCAKLSVFG-VHEDGGMREYIVLPERQLHAVSKDL 136          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: YHG1_SCHPO (Zinc-type alcohol dehydrogenase-like protein C1198.01 OS=Schizosaccharomyces pombe GN=SPBC1198.01 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 1
Query:   70 GIKTLKIQPYHLPTLG-PQDVKVRIKALGIC-GNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLC 366
            G   +KI     PT+  P+DV V+  A  IC G+D H F         ++K  ++GHE  GI+ E G EVN+LE+GDR  +   + CG C+ CK   Y  C
Sbjct:   44 GPLNVKIAEVPKPTITHPKDVIVKTTACTICSGSDSHIFSGEMPG---IEKGAILGHESCGIVAEKGDEVNNLEIGDRVVIAFDLACGQCSFCKRHEYAAC 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_PARUW (L-threonine 3-dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=tdh PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 42/118 (35.59%), Postives = 58/118 (49.15%), Query Frame = 1
Query:  121 QDVKVRIKAL--GICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +D +V IK +   ICG DVH +K    A   V  P+VIGHE  G I E G  V   ++G+R   E  I C  C  C+ G   +C   + +G    +G  A   V PA+  + LP  +S
Sbjct:   25 KDDEVLIKTIKTSICGTDVHIYKWDAWAQKNVPVPLVIGHEFIGEIAEFGKNVKGFKIGERVCGEGHIVCNQCPNCRMGRKHVCMHTKGLGY-HISGCFAEYFVLPAENVFSLPPSIS 141          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
CADH1_OCIBA3.661e-1134.09Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
TDH_STRGG4.781e-1135.45L-threonine 3-dehydrogenase OS=Streptomyces griseu... [more]
YJMD_BACSU8.155e-1132.23Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
YHG1_SCHPO8.155e-1138.61Zinc-type alcohol dehydrogenase-like protein C1198... [more]
TDH_PARUW8.155e-1135.59L-threonine 3-dehydrogenase OS=Protochlamydia amoe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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