EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHESA (L-threonine 3-dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.136e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEPC (L-threonine 3-dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.136e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHELP (L-threonine 3-dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.136e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G + E+G EV   ++GDR + E  I CGHC  C+AG   LC     VG     G+ A  +V PA   +K+PDD+S
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQNTIPVPMVVGHEYVGEVVEIGQEVRGFQIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGAFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_PSEHT (L-threonine 3-dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.136e-19
Identity = 48/121 (39.67%), Postives = 68/121 (56.20%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++I+   ICG DVH +K    A   +  PMV+GHE  G + ++G EV   +VGDR + E  I CGHC  C+AG   LC     VG     G+ A  +V PA   +K+PD++S
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYKWDEWAQKTIPTPMVVGHEYVGEVVDMGQEVRGFKVGDRVSGEGHITCGHCRNCRAGRVHLCRNTTGVG-VNREGAFAEYLVIPAFNAFKIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEON (L-threonine 3-dehydrogenase OS=Shewanella oneidensis GN=tdh PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.063e-18
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG D+H +     +   +  PMV+GHE  G + ++G EV    +GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFNIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_EDWI9 (L-threonine 3-dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.063e-18
Identity = 48/121 (39.67%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            LP LG  D+ ++I+   ICG DVH +   T +   +  PMV+GHE  G +  VG EV    +GDR + E  I CGHC  C+AG   LC     VG     G+ A  +V PA   +K+PD++
Sbjct:   20 LPALGHNDIMIKIRKAAICGTDVHIYNWDTWSQKTIPVPMVVGHEYVGEVVAVGQEVRGFRIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVG-VNRQGAFAEYLVIPAFNAFKIPDNI 139          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEWM (L-threonine 3-dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=tdh PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.813e-18
Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G + ++G EV    +GDR + E  I CGHC  C+AG   LC     VG    +G+ A  +V PA   +K+PDD+S
Sbjct:   21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQNTIPVPMVVGHEYVGEVVDIGQEVRGFSIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVG-VNRDGAFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_COLP3 (L-threonine 3-dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tdh PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.813e-18
Identity = 50/121 (41.32%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++IK   ICG D+H +     A   V  PMV+GHE AG +  +G EV    +GDR + E  I CGHC  C+ G   LC     VG     GS A  +V PA   +KLPD++S
Sbjct:   21 PKLGHNDLLIKIKKTAICGTDIHIYNWDEWAQKTVPTPMVVGHEYAGEVVGIGQEVKGFTLGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNRA-GSFAEYLVIPAYNAFKLPDEIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEAM (L-threonine 3-dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tdh PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.367e-18
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+AG   LC     VG     GS A  +V PA   +K+PDD+S
Sbjct:   21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTTGVG-VNREGSFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ANADF (L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=tdh PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.038e-18
Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +P +G  DV++R++   ICG DVH +     +   +  PM++GHE  G++  VG EV +   GDR + E  + CG C  C+AG   LC     VG     GS A  VV PA   Y++PDD+
Sbjct:   21 VPEVGVHDVRIRVRKSAICGTDVHIYNWDEWSQRTIPVPMIVGHEYVGVVDAVGGEVEAFHPGDRVSGEGHVTCGFCRNCRAGRRHLCRHTIGVG-VNRPGSFAEYVVIPADNVYRIPDDI 140          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
TDH_SHESA8.136e-1938.84L-threonine 3-dehydrogenase OS=Shewanella sp. (str... [more]
TDH_SHEPC8.136e-1938.84L-threonine 3-dehydrogenase OS=Shewanella putrefac... [more]
TDH_SHELP8.136e-1938.84L-threonine 3-dehydrogenase OS=Shewanella loihica ... [more]
TDH_PSEHT8.136e-1939.67L-threonine 3-dehydrogenase OS=Pseudoalteromonas h... [more]
TDH_SHEON1.063e-1838.84L-threonine 3-dehydrogenase OS=Shewanella oneidens... [more]
TDH_EDWI91.063e-1839.67L-threonine 3-dehydrogenase OS=Edwardsiella ictalu... [more]
TDH_SHEWM1.813e-1838.02L-threonine 3-dehydrogenase OS=Shewanella woodyi (... [more]
TDH_COLP31.813e-1841.32L-threonine 3-dehydrogenase OS=Colwellia psychrery... [more]
TDH_SHEAM2.367e-1838.84L-threonine 3-dehydrogenase OS=Shewanella amazonen... [more]
TDH_ANADF4.038e-1838.02L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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