EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_PSEA6 (L-threonine 3-dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=tdh PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.274e-18
Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 1
Query:   76 KTLKIQPYHLPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            K + +    +PT+G  D+ ++I+   ICG D+H +     +   +  PMV+GHE  G + E+G EV    +GDR + E  I CGHC  C+AG   LC     VG     G+ A  +  PA   +K+PD++S
Sbjct:   11 KGIWLHDSEMPTVGHNDILIKIRKTAICGTDMHIYNWDEWSQNTIPVPMVVGHEYVGEVVEIGEEVRGFAIGDRVSGEGHITCGHCRNCRAGRRHLCRNTSGVGVNRA-GAFAEYLSIPAFNAFKIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_VIBPA (L-threonine 3-dehydrogenase OS=Vibrio parahaemolyticus GN=tdh PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.888e-18
Identity = 46/121 (38.02%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++IK   ICG DVH +     +   +  PMV+GHE  G +  +G EV   E+GDR + E  I CGHC  C+ G   LC     VG     G+ A  +V PA   +K+PD++S
Sbjct:   23 PEVGHNDILIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNREGAFAEYLVIPAFNAFKIPDEIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ERWCT (L-threonine 3-dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=tdh PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.888e-18
Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G I  +G EVN   +GDR + E  I CG+C  C+AG   LC     VG     GS A  +V PA   +++PD++S
Sbjct:   20 MPELGHNDIMIKIRKSAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEIVAIGQEVNGFHIGDRVSGEGHITCGYCRNCRAGRRHLCRNAIGVG-VNRPGSFAEYLVIPAYNAFRIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_IDILO (L-threonine 3-dehydrogenase OS=Idiomarina loihiensis GN=tdh PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P  G  D+ ++IK   ICG DVH +K    +   +  PMV+GHE  G +  +G  V   E+GDR + E  I CGHC  C+AG   LC     VG     G+ A  +  PA+  +KLPDDV+
Sbjct:   21 PECGYNDLLIKIKKTAICGTDVHIYKWDDWSQKTIPVPMVVGHEYVGEVAAMGDGVRGFEIGDRVSGEGHITCGHCRNCRAGRRHLCRNTYGVG-VNRPGAFAEYLALPAENAFKLPDDVT 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHESH (L-threonine 3-dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=tdh PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++I+   ICG D+H +     +   +  PMV+GHE  G + ++G EV   +VGDR + E  I CGHC  C+ G   LC     VG    +G+ A  +V PA   +K+PDD+S
Sbjct:   21 PEMGHNDLLIKIRKTAICGTDIHIYNWDEWSQKTIPVPMVVGHEYVGEVIDMGIEVRGFDVGDRVSGEGHITCGHCRNCRGGRTHLCRNTSGVG-VNRDGAFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SERP5 (L-threonine 3-dehydrogenase OS=Serratia proteamaculans (strain 568) GN=tdh PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV    VGDR + E  I CGHC  C+ G   LC     VG     GS A  +V PA   +K+PD++S
Sbjct:   21 PELGHNDIMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFTVGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVG-VNRPGSFAEYLVIPAFNAFKIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_PECCP (L-threonine 3-dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=tdh PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G I  +G EVN   +GDR + E  I CG+C  C+AG   LC     VG     GS A  +V PA   +++PD++S
Sbjct:   21 PELGHNDIMIKIRKSAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEIVAIGQEVNGFHIGDRVSGEGHITCGYCRNCRAGRRHLCRNAIGVG-VNRPGSFAEYLVIPAYNAFRIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_YERPY (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=tdh PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.004e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV    +GDR + E  I CGHC  C+ G   LC     VG     GS A  +V PA   +K+PD++S
Sbjct:   21 PELGHNDIMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVG-VNRPGSFAEYLVIPAFNAFKIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_YERPS (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis GN=tdh PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.004e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV    +GDR + E  I CGHC  C+ G   LC     VG     GS A  +V PA   +K+PD++S
Sbjct:   21 PELGHNDIMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVG-VNRPGSFAEYLVIPAFNAFKIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_YERPP (L-threonine 3-dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=tdh PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.004e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV    +GDR + E  I CGHC  C+ G   LC     VG     GS A  +V PA   +K+PD++S
Sbjct:   21 PELGHNDIMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVG-VNRPGSFAEYLVIPAFNAFKIPDNIS 140          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
TDH_PSEA65.274e-1835.11L-threonine 3-dehydrogenase OS=Pseudoalteromonas a... [more]
TDH_VIBPA6.888e-1838.02L-threonine 3-dehydrogenase OS=Vibrio parahaemolyt... [more]
TDH_ERWCT6.888e-1838.52L-threonine 3-dehydrogenase OS=Erwinia carotovora ... [more]
TDH_IDILO8.996e-1839.67L-threonine 3-dehydrogenase OS=Idiomarina loihiens... [more]
TDH_SHESH1.175e-1737.19L-threonine 3-dehydrogenase OS=Shewanella sedimini... [more]
TDH_SERP51.175e-1738.84L-threonine 3-dehydrogenase OS=Serratia proteamacu... [more]
TDH_PECCP1.175e-1738.84L-threonine 3-dehydrogenase OS=Pectobacterium caro... [more]
TDH_YERPY2.004e-1738.02L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]
TDH_YERPS2.004e-1738.02L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]
TDH_YERPP2.004e-1738.02L-threonine 3-dehydrogenase OS=Yersinia pestis (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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