EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_VIBCH (L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=tdh PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.617e-17
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++IK   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG   T G  +  +V PA   +K+PD +S
Sbjct:   22 MPELGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFQIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPDGIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_VIBC3 (L-threonine 3-dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=tdh PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.617e-17
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++IK   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG   T G  +  +V PA   +K+PD +S
Sbjct:   22 MPELGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFQIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPDGIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ALISL (L-threonine 3-dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=tdh PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.418e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ +RIK   ICG DVH +     +   +  PMV+GHE  G +  +G EV   E+GDR + E  I CGHC  C+ G   LC     VG   T G+ +  +V PA   +K+P  +S
Sbjct:   23 PEMGHNDILIRIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRT-GAFSEFLVIPAFNAFKIPAGIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_VIBFM (L-threonine 3-dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.465e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ +RIK   ICG DVH +     +   +  PMV+GHE  G +  +G EV   E+GDR + E  I CGHC  C+ G   LC     VG   T G+ +  +V PA   +K+P  +S
Sbjct:   23 PEMGHNDLLIRIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRT-GAFSEYLVIPAFNAFKIPAGIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_VIBF1 (L-threonine 3-dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.465e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ +RIK   ICG DVH +     +   +  PMV+GHE  G +  +G EV   E+GDR + E  I CGHC  C+ G   LC     VG   T G+ +  +V PA   +K+P  +S
Sbjct:   23 PEMGHNDLLIRIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRT-GAFSEYLVIPAFNAFKIPAGIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SYMTH (L-threonine 3-dehydrogenase OS=Symbiobacterium thermophilum GN=tdh PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.465e-17
Identity = 48/132 (36.36%), Postives = 70/132 (53.03%), Query Frame = 1
Query:   88 IQPYHLPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVSFGKKS 483
            +Q   +PT+GP+DV V+++A  ICG D H +     +   VK P+ IGHE AG +  VG EV + +VGD  + E  I C  C  C  G Y LC   + +G   T+G+ A  V  P +  +    D+ F  +S
Sbjct:   19 LQEVPIPTIGPRDVLVKVRAASICGTDYHIYTWDPWSAGRVKPPLTIGHELAGEVVAVGREVTACKVGDYVSAETHIVCNRCPRCHMGEYHLCENTKILG-VDTDGAFAEYVAVPEQNIWVNDKDIPFELQS 149          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_PYRKO (Probable L-threonine 3-dehydrogenase OS=Pyrococcus kodakaraensis GN=tdh PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.465e-17
Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +P  GP +V +++ A  ICG D+H ++    A   +K P ++GHE AG + EVG  V  L+VGD  ++E  I CG C  CK   Y +C   +  G    +G  AH  + PAK  +K P D+
Sbjct:   24 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFG-VDMDGVFAHYAIVPAKNAWKNPKDM 143          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ANAD2 (L-threonine 3-dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.465e-17
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +P +G  DV +R+    ICG DVH +     +   V  PMV+GHE  G +++VG+EV +   G+R + E  + CG C  C+AG   LC     VG     GS A  VV PA   Y++PDD+
Sbjct:   21 VPEVGVHDVMIRVTKSAICGTDVHIYNWDEWSQKTVPVPMVVGHEYVGRVEKVGAEVEAFRPGERVSGEGHVTCGFCRNCRAGRRHLCRHTVGVG-VNRPGSFAEYVVIPADNVYRIPDDI 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ALTMD (L-threonine 3-dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.465e-17
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 1
Query:   76 KTLKIQPYHLPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            K + +Q    P +G  D+ ++I+   ICG D+H +     +   +  P+V+GHE  G +  +G EV   EVGDR + E  I CGHC  C+AG   LC     VG     G+ A  +V PA   +K+PD++S
Sbjct:   11 KGIWLQDTPKPEVGHNDLLIKIRKTAICGTDMHIYNWDEWSQNTIPVPVVVGHEYVGEVVGMGQEVKGFEVGDRVSGEGHITCGHCRNCRAGRVHLCRNTEGVG-VNRPGAFAEYLVIPAFNAFKIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_XANOR (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=tdh PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 1
Query:   76 KTLKIQPYHLPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            K + ++   +PT GP +V ++++   ICG D+H +     +   +K  + IGHE  G + E+GS V   +VG R + E  I CGHC  C+ G   LCP    +G    NG+ A  +V PA   + +PD +
Sbjct:   11 KGIWLEQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTMGIG-VNVNGAFAEYMVMPASNLWPIPDQI 139          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
TDH_VIBCH2.617e-1737.70L-threonine 3-dehydrogenase OS=Vibrio cholerae GN=... [more]
TDH_VIBC32.617e-1737.70L-threonine 3-dehydrogenase OS=Vibrio cholerae ser... [more]
TDH_ALISL3.418e-1738.02L-threonine 3-dehydrogenase OS=Aliivibrio salmonic... [more]
TDH_VIBFM4.465e-1738.02L-threonine 3-dehydrogenase OS=Vibrio fischeri (st... [more]
TDH_VIBF14.465e-1738.02L-threonine 3-dehydrogenase OS=Vibrio fischeri (st... [more]
TDH_SYMTH4.465e-1736.36L-threonine 3-dehydrogenase OS=Symbiobacterium the... [more]
TDH_PYRKO4.465e-1737.19Probable L-threonine 3-dehydrogenase OS=Pyrococcus... [more]
TDH_ANAD24.465e-1738.84L-threonine 3-dehydrogenase OS=Anaeromyxobacter de... [more]
TDH_ALTMD4.465e-1735.88L-threonine 3-dehydrogenase OS=Alteromonas macleod... [more]
TDH_XANOR5.831e-1733.85L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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