EY735517

Overview
NameEY735517
Unique NameEY735517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_XANOM (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 1
Query:   76 KTLKIQPYHLPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            K + ++   +PT GP +V ++++   ICG D+H +     +   +K  + IGHE  G + E+GS V   +VG R + E  I CGHC  C+ G   LCP    +G    NG+ A  +V PA   + +PD +
Sbjct:   11 KGIWLEQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTMGIG-VNVNGAFAEYMVMPASNLWPIPDQI 139          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEPA (L-threonine 3-dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 45/121 (37.19%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV    +GDR + E  I CGHC  C+ G   LC     VG     G+ A  +V PA   +K+PDD+S
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQNTIPVPMVVGHEYVGEVVGMGQEVRGFTIGDRVSGEGHITCGHCRNCRGGRTHLCRNTSGVG-VNREGAFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_SHEHH (L-threonine 3-dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 45/121 (37.19%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV    +GDR + E  I CGHC  C+ G   LC     VG     G+ A  +V PA   +K+PDD+S
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQNTIPVPMVVGHEYVGEVVGMGQEVRGFTIGDRVSGEGHITCGHCRNCRGGRTHLCRNTSGVG-VNREGAFAEYLVIPAFNAFKIPDDIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ESCF3 (L-threonine 3-dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 46/121 (38.02%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+AG   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   21 PELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ANADE (L-threonine 3-dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 47/121 (38.84%), Postives = 65/121 (53.72%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            +P +G  DV +R+    ICG DVH +     +   V  PMV+GHE  G ++ VG+EV +   G+R + E  + CG C  C+AG   LC     VG     GS A  VV PA   Y++PDD+
Sbjct:   21 VPEVGVHDVMIRVTKSAICGTDVHIYNWDEWSQKTVPVPMVVGHEYVGRVERVGAEVEAFRPGERVSGEGHVTCGFCRNCRAGRRHLCRHTVGVG-VNRPGSFAEYVVIPADNVYRIPDDI 140          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_AERHH (L-threonine 3-dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.831e-17
Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDV 465
            P LG  D+ ++I+   ICG D+H +     +   +  PMV+GHE  G +  +G EV    VGDR + E  I CGHC  C+AG   LC     VG     G+ A  +V PA   +KLPD+V
Sbjct:   21 PELGHNDLLIKIRKTAICGTDIHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVRGFAVGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVG-VNRPGAFAEYLVIPAFNAFKLPDNV 139          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_VIBVY (L-threonine 3-dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.615e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++IK   ICG DVH +     +   +  PMV+GHE  G +  +G EV   E+GDR + E  I CGHC  C+ G   LC     VG   T G  +  +V PA   +K+P ++S
Sbjct:   23 PVLGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPANIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_VIBVU (L-threonine 3-dehydrogenase OS=Vibrio vulnificus GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.615e-17
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P LG  D+ ++IK   ICG DVH +     +   +  PMV+GHE  G +  +G EV   E+GDR + E  I CGHC  C+ G   LC     VG   T G  +  +V PA   +K+P ++S
Sbjct:   23 PVLGHNDLLIKIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRT-GCFSEYLVIPAFNAFKIPANIS 142          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_THET8 (L-threonine 3-dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tdh PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.615e-17
Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVSF 471
            +P  GP ++ VR++A  ICG D+H +K    A   ++ P+V GHE +G+++ VG  V   +VGD  +LE+ I C  C  C+ GNY +C   + +G    +G  A  VV PA+  +  P D+ F
Sbjct:   20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILG-VDRDGGFAEYVVVPAENAWVNPKDLPF 141          
BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_THET2 (L-threonine 3-dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tdh PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.615e-17
Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 1
Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVSF 471
            +P  GP ++ VR++A  ICG D+H +K    A   ++ P+V GHE +G+++ VG  V   +VGD  +LE+ + C  C  C+ GNY +C   + +G    +G  A  VV PA+  +  P D+ F
Sbjct:   20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVKRPQVGDHVSLESHVVCHACPACRTGNYHVCLNTKILG-VDRDGGFAEYVVVPAENAWVNPKDLPF 141          
The following BLAST results are available for this feature:
BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
TDH_XANOM5.831e-1733.85L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]
TDH_SHEPA5.831e-1737.19L-threonine 3-dehydrogenase OS=Shewanella pealeana... [more]
TDH_SHEHH5.831e-1737.19L-threonine 3-dehydrogenase OS=Shewanella halifaxe... [more]
TDH_ESCF35.831e-1738.02L-threonine 3-dehydrogenase OS=Escherichia ferguso... [more]
TDH_ANADE5.831e-1738.84L-threonine 3-dehydrogenase OS=Anaeromyxobacter de... [more]
TDH_AERHH5.831e-1739.17L-threonine 3-dehydrogenase OS=Aeromonas hydrophil... [more]
TDH_VIBVY7.615e-1738.02L-threonine 3-dehydrogenase OS=Vibrio vulnificus (... [more]
TDH_VIBVU7.615e-1738.02L-threonine 3-dehydrogenase OS=Vibrio vulnificus G... [more]
TDH_THET87.615e-1736.59L-threonine 3-dehydrogenase OS=Thermus thermophilu... [more]
TDH_THET27.615e-1735.77L-threonine 3-dehydrogenase OS=Thermus thermophilu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT
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