EY735517 | Citrus Genome Database

Overview


Name	EY735517
Unique Name	EY735517
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	956

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_KLEP3 (L-threonine 3-dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/121 (37.19%), Postives = 65/121 (53.72%), Query Frame = 1

Query:  106 PTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            P +G  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+AG   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOUT (L-threonine 3-dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOSM (L-threonine 3-dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOSE (L-threonine 3-dehydrogenase OS=Escherichia coli (strain SE11) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOLU (L-threonine 3-dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOLI (L-threonine 3-dehydrogenase OS=Escherichia coli (strain K12) GN=tdh PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOLC (L-threonine 3-dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOL6 (L-threonine 3-dehydrogenase OS=Escherichia coli O6 GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOL5 (L-threonine 3-dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

[Close]

BLAST of EY735517 vs. ExPASy Swiss-Prot
Match: TDH_ECOK1 (L-threonine 3-dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=tdh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16
Identity = 45/122 (36.89%), Postives = 65/122 (53.28%), Query Frame = 1

Query:  103 LPTLGPQDVKVRIKALGICGNDVHHFKTMTCANFIVKKPMVIGHECAGIIKEVGSEVNSLEVGDRGALEAGINCGHCTLCKAGNYKLCPEMRFVGSPPTNGSLAHNVVHPAKLCYKLPDDVS 468
            +P LG  D+ ++I+   ICG DVH +     +   +  PMV+GHE  G +  +G EV   ++GDR + E  I CGHC  C+ G   LC     VG     G  A  +V PA   +K+PD++S
Sbjct:   20 VPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVG-VNRPGCFAEYLVIPAFNAFKIPDNIS 140

The following BLAST results are available for this feature:

BLAST of EY735517 vs. ExPASy Swiss-Prot

BLAST of EY735517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215


Match Name	E-value	Identity	Description
TDH_KLEP3	1.299e-16	37.19	L-threonine 3-dehydrogenase OS=Klebsiella pneumoni...	[more]
TDH_ECOUT	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli (s...	[more]
TDH_ECOSM	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli (s...	[more]
TDH_ECOSE	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli (s...	[more]
TDH_ECOLU	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli O1...	[more]
TDH_ECOLI	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli (s...	[more]
TDH_ECOLC	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli (s...	[more]
TDH_ECOL6	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli O6...	[more]
TDH_ECOL5	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli O6...	[more]
TDH_ECOK1	1.299e-16	36.89	L-threonine 3-dehydrogenase OS=Escherichia coli O1...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-704-090-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY735517 ID=EY735517; Name=EY735517; organism=Citrus sinensis; type=EST; length=956bp
ATTGAAATGGCTGAAGCAATCCCATATGACGAACGAGACAAGAATCAGAA
CATGGCTGCTTGGCTGCTTGGAATCAAAACTCTGAAAATTCAGCCATATC
ATTTGCCTACCCTAGGTCCTCAAGATGTGAAAGTACGAATTAAGGCTCTT
GGAATATGTGGAAATGATGTTCATCACTTCAAGACTATGACATGTGCCAA
TTTTATTGTGAAAAAACCTATGGTAATTGGACATGAATGTGCTGGGATCA
TAAAAGAAGTTGGCAGTGAAGTTAACTCCCTTGAGGTGGGTGATCGTGGG
GCTCTAGAAGCTGGTATTAATTGCGGACACTGCACTCTCTGCAAAGCTGG
TAACTATAAACTTTGCCCTGAAATGAGATTCGTTGGATCTCCTCCAACCA
ACGGCTCTCTTGCCCATAATGTTGTGCATCCAGCGAAGTTATGTTACAAG
TTACCTGACGATGTGAGCTTTGGAAAGAAGAGCAATGTGTGAGCCCTTAA
GTGCTGGTGTCCTTGCCCTGTCGCCCAGCAAATGCTTCGAACCTGAAAAC
AATTGTATTGATCATGGGATCACGGACCGAGAGGCCTTGGGTAACCTGTT
AGCTGGTCAAGAATTTGGGGGCCCCCAAAATTATCATCAAAGGATGATGG
AATGGTCATCGCCCTTTCTTTTGGCAAGTGAATTTGGATGTGGTAGGATA
CAAAAAATAGTCCTTCAACTATTCTTGGGGATGGTAGAAACAAAAGATGG
GGCAAGAATAATAAAAAAACTATGGGGATACGGGGCTTTAATTTGGATGC
TTTTTATATAGTGATGGGAGTTATAAAAAAATCAATAGTATATACAATAA
ATTAGAAGACAATTCTATATTAAGAGAAAATAAATATTGTATAATTAGAG
AATATATAGAAGAGAGGGATAAATAGAAGAGATAAAAAAACAATAACACA
CAACGT