EY735508

Overview
NameEY735508
Unique NameEY735508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1050
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA5_HUMAN (Importin subunit alpha-6 OS=Homo sapiens GN=KPNA5 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 8.692e-41
Identity = 108/225 (48.00%), Postives = 137/225 (60.89%), Query Frame = 1
Query:   49 TKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            TKVVI+ GAVPIF+KLL S  ++++E+A  ALGN+A D+   RD VL+ E L PLL LL N   L+  R A   LSNLC G NP P F +V P L  L++L+ S+D  VL D C AL +L SD  NDKIQAVI++GVC RLVELL H    V++ AL+ V     G  I   V   L C+A+P         +  I+K ACW + NI AG  R +I A IDA  +
Sbjct:  160 TKVVIETGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYL-SDGPNDKIQAVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVI--LNCSALPCLLHLLSSPKESIRKEACWTVSNITAG-NRAQIQAVIDANIF 380          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA5_RAT (Importin subunit alpha-6 OS=Rattus norvegicus GN=Kpna5 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.639e-39
Identity = 105/225 (46.67%), Postives = 135/225 (60.00%), Query Frame = 1
Query:   49 TKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            TKVVI+ GAVPIF++LL S  ++++E+A  ALGN+A D+   RD VL+ E L PLL LL N   L+  R A   LSNLC G NP P F +V P L  L++L+ S+D  VL D C AL +L SD  NDKIQ VI++GVC RLVELL H    V++ AL+ V     G  I   V   L C+A+P         +  ++K ACW I NI AG  R +I A ID   +
Sbjct:  160 TKVVIETGAVPIFIRLLTSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYL-SDGPNDKIQVVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVI--LNCSALPCLLHLLGSPKESVRKEACWTISNITAG-NRMQIQAVIDGSIF 380          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_CHICK (Importin subunit alpha-1 OS=Gallus gallus GN=KPNA1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.091e-38
Identity = 106/225 (47.11%), Postives = 133/225 (59.11%), Query Frame = 1
Query:   49 TKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            T++VI  GAVPIF++LL+S  ++++E+A  ALGN+A DS   RD VL    L PLL LL+    ++M R A   LSNLC G NP P F +V P L  L+ L+  ND  VL DAC AL +L SD  NDKIQAVI+AGVC RLVELL H    V++ AL+ V     G  I   V   L C+A+          +  IKK ACW I NI AG  R +I   IDA  +
Sbjct:  162 TRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLLSKQNRITMTRNAVWALSNLCRGKNPPPDFAKVSPCLSVLSWLLFVNDTDVLADACWALSYL-SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVI--LNCSALQSLLHLLSSPKESIKKEACWTISNITAG-NRAQIQTVIDAHIF 382          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA2_SCHPO (Importin subunit alpha-2 OS=Schizosaccharomyces pombe GN=imp1 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.534e-37
Identity = 95/226 (42.04%), Postives = 140/226 (61.95%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHA-NLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAV-PFGAVESMDHEIRIKKFACWIIGNIPAGETRK 687
            + +   + + T++V+D GAVP F++LL+SP  ++RE+   ALGN+A DS   RD VL    L PLL +L + A ++SM R AT TLSNLC G NP P +  +  A+P LA+L++S D +++ DAC A+ +L SD  N+KI A+++ G  PRLVELL  PS ++ T AL++V     G      +   + C A+  F ++ S   E  I+K ACW I NI AG T++
Sbjct:  145 TNIASGTTDQTRIVVDSGAVPRFIQLLSSPEKDVREQVVWALGNIAGDSSACRDYVLGNGVLQPLLNILQSSASDVSMLRNATWTLSNLCRGKNPPPNWSTISVAVPILAKLLYSEDVEIIVDACWAISYL-SDGPNEKIGAILDVGCAPRLVELLSSPSVNIQTPALRSVGNIVTGTDAQTQII--IDCGALNAFPSLLSHQKE-NIRKEACWTISNITAGNTQQ 366          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_SCHPO (Importin subunit alpha-1 OS=Schizosaccharomyces pombe GN=cut15 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.617e-37
Identity = 96/224 (42.86%), Postives = 135/224 (60.27%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIR--IKKFACWIIGNIPAGET 681
            + V   S+  T VV++  AVP+FV LL+S   ++RE+A  ALGN+A DSP  RD VL    L PLL ++ ++  LSM R +T TLSN+C G NP+P +  +   +P L++L+++ DE VL DA  A+ +L SD  N+KIQA+I+AG+  RLVELL HPS  V T AL++V     G    D V   +        A+ S+    R  ++K ACW I NI AG +
Sbjct:  146 TNVASGSSNQTHVVVEANAVPVFVSLLSSSEQDVREQAVWALGNIAGDSPMCRDHVLQCGVLEPLLNIIESNRRLSMLRNSTWTLSNMCRGKNPQPDWNSISQVIPVLSKLIYTLDEDVLVDALWAISYL-SDGANEKIQAIIDAGIPRRLVELLMHPSAQVQTPALRSVGNIVTG----DDVQTQVIINCGALSALLSLLSSPRDGVRKEACWTISNITAGNS 364          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_RAT (Importin subunit alpha-1 OS=Rattus norvegicus GN=Kpna1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.830e-37
Identity = 104/225 (46.22%), Postives = 132/225 (58.67%), Query Frame = 1
Query:   49 TKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            T++VI  GAVPIF++LL+S  ++++E+A  ALGN+A DS   RD VL    L PLL L +    L+M R A   LSNLC G +P P F +V P L  L+ L+  +D  VL DAC AL +L SD  NDKIQAVI+AGVC RLVELL H    V++ AL+ V     G  I   V   L C+A+          +  IKK ACW I NI AG  R +I   IDA  +
Sbjct:  162 TRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL-SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVI--LNCSALQSLLHLLSSPKESIKKEACWTISNITAG-NRAQIQTVIDANMF 382          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_PONAB (Importin subunit alpha-1 OS=Pongo abelii GN=KPNA1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.830e-37
Identity = 104/225 (46.22%), Postives = 132/225 (58.67%), Query Frame = 1
Query:   49 TKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            T++VI  GAVPIF++LL+S  ++++E+A  ALGN+A DS   RD VL    L PLL L +    L+M R A   LSNLC G +P P F +V P L  L+ L+  +D  VL DAC AL +L SD  NDKIQAVI+AGVC RLVELL H    V++ AL+ V     G  I   V   L C+A+          +  IKK ACW I NI AG  R +I   IDA  +
Sbjct:  162 TRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL-SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVI--LNCSALQSLLHLLSSPKESIKKEACWTISNITAG-NRAQIQTVIDANIF 382          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_HUMAN (Importin subunit alpha-1 OS=Homo sapiens GN=KPNA1 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 5.830e-37
Identity = 104/225 (46.22%), Postives = 132/225 (58.67%), Query Frame = 1
Query:   49 TKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            T++VI  GAVPIF++LL+S  ++++E+A  ALGN+A DS   RD VL    L PLL L +    L+M R A   LSNLC G +P P F +V P L  L+ L+  +D  VL DAC AL +L SD  NDKIQAVI+AGVC RLVELL H    V++ AL+ V     G  I   V   L C+A+          +  IKK ACW I NI AG  R +I   IDA  +
Sbjct:  162 TRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL-SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVI--LNCSALQSLLHLLSSPKESIKKEACWTISNITAG-NRAQIQTVIDANIF 382          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_BOVIN (Importin subunit alpha-1 OS=Bos taurus GN=KPNA1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.614e-37
Identity = 103/225 (45.78%), Postives = 132/225 (58.67%), Query Frame = 1
Query:   49 TKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            T++VI  GAVPIF++LL+S  ++++E+A  ALGN+A DS   RD VL    L PLL L +    L+M R A   LSNLC G +P P F +V P L  L+ L+  +D  VL DAC AL +L SD  NDKIQAVI+AGVC RLVELL H    V++ AL+ V     G  +   V   L C+A+          +  IKK ACW I NI AG  R +I   IDA  +
Sbjct:  162 TRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL-SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDVQTQVI--LNCSALQSLLHLLSSPKESIKKEACWTISNITAG-NRAQIQTVIDANIF 382          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA5_DANRE (Importin subunit alpha-6 OS=Danio rerio GN=kpna5 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 9.945e-37
Identity = 103/227 (45.37%), Postives = 134/227 (59.03%), Query Frame = 1
Query:   43 EDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            + TKVVI+ GAVPIF++LL S  ++++E+A  ALGN+A D+   RD VL+   L  L  LL     L+  R A   LSNLC G NP P F +V P L  L++L+ S+D  VL DAC AL +L SD  NDKIQ VI++GVC RLVELL H    V++ AL+ V     G  I   V   L C+A+P         +  IKK ACW + NI AG  R +I A ID+  +
Sbjct:  158 QHTKVVIETGAVPIFIELLNSEYEDVQEQAVWALGNIAGDNAECRDYVLNCGILPSLQQLLAKSNRLTTTRNAVWALSNLCRGKNPPPDFAKVSPCLSVLSRLLFSSDPDVLADACWALSYL-SDGPNDKIQTVIDSGVCRRLVELLMHSDYKVVSPALRAVGNIVTGDDIQTQVI--LNCSALPCLLHLLSSPKESIKKEACWTVSNITAG-NRAQIQAVIDSNVF 380          
The following BLAST results are available for this feature:
BLAST of EY735508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
IMA5_HUMAN8.692e-4148.00Importin subunit alpha-6 OS=Homo sapiens GN=KPNA5 ... [more]
IMA5_RAT1.639e-3946.67Importin subunit alpha-6 OS=Rattus norvegicus GN=K... [more]
IMA1_CHICK3.091e-3847.11Importin subunit alpha-1 OS=Gallus gallus GN=KPNA1... [more]
IMA2_SCHPO1.534e-3742.04Importin subunit alpha-2 OS=Schizosaccharomyces po... [more]
IMA1_SCHPO2.617e-3742.86Importin subunit alpha-1 OS=Schizosaccharomyces po... [more]
IMA1_RAT5.830e-3746.22Importin subunit alpha-1 OS=Rattus norvegicus GN=K... [more]
IMA1_PONAB5.830e-3746.22Importin subunit alpha-1 OS=Pongo abelii GN=KPNA1 ... [more]
IMA1_HUMAN5.830e-3746.22Importin subunit alpha-1 OS=Homo sapiens GN=KPNA1 ... [more]
IMA1_BOVIN7.614e-3745.78Importin subunit alpha-1 OS=Bos taurus GN=KPNA1 PE... [more]
IMA5_DANRE9.945e-3745.37Importin subunit alpha-6 OS=Danio rerio GN=kpna5 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735508 ID=EY735508; Name=EY735508; organism=Citrus sinensis; type=EST; length=1050bp
ACCGCCGACGCGTCGGATTCCCGGGTCGACCCCGCGTCCGCGGAGGACAC
TAAGGTGGTGATTGACCACGGTGCTGTTCCAATATTTGTGAAACTACTTG
CTTCTCCAAGAGATAATATCCGGGAGAAGGCTGCTTCGGCATTGGGAAAT
GTTGCTATTGACTCGCCTAGATTCCGTGATCTTGTGCTTAGTGAAGAAGC
TCTAATTCCATTGTTAACACTGTTAAATAACCATGCAAACCTTTCAATGA
AGAGAAGAGCCACACGGACGTTGTCTAATTTATGCAGCGGCAATCCACGA
CCAATATTTGAACAGGTGAGACCAGCTCTTCCGGCGCTTGCGCAGCTTGT
TCATTCAAATGATGAACAGGTCTTGACTGATGCTTGCCGGGCACTCTTCT
TTCTTTCTAGTGATCGTAAGAATGACAAAATTCAAGCTGTGATTGAGGCA
GGTGTCTGTCCACGACTTGTTGAGCTCCTTGGTCATCCATCACCCTCAGT
GCTTACTGCTGCCCTGCAGACTGTTTACAAATATTGTGAGGGGAGATGAA
TTCCAGACTCAGTGTATAATTAACTGTGGTGCACTGCCGTACCTTTTGGG
GCTGTTGAATCCATGGATCATGAAATTCGCATTAAGAAATTTGCATGCTG
GATTATTGGCAATATTCCAGCTGGGGAAACAAGGAAAAAAATTCCGGCGG
GAATTGATGCTGGCTTTTATTGGGCCCCCTTTGCAACCTGCTTCCAAAAT
GTTAAATTTTGATATAAAGGGATGGGGCCCCCAGGGGCCATTTTCAAACG
GCCCCCAGGGTTGAACACTCCTGAACCAAATTCGGTTATCTCCTGGGAAA
AAGGGGGGGGGAAAAAAACCATGTGGGGGGATCCCTTTTTTTTGGGGCTC
AATTCCAAAAAAATCGCCTCGGGTTTTGGCTTAAAAGAGGGGTTTAAAAA
AAAATTTTTTTGAAGAGGGCGGGGGGGAAAGCGCATTGAAAAAAAAAAAA
ATTTGGGCAACCCCCCTCACCCTTATGGGTGAAAAAGATTGTTTTTGCAC
back to top