EY735508

Overview
NameEY735508
Unique NameEY735508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1050
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_MOUSE (Importin subunit alpha-1 OS=Mus musculus GN=Kpna1 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.215e-36
Identity = 104/225 (46.22%), Postives = 132/225 (58.67%), Query Frame = 1
Query:   49 TKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            T+ VI  GAVPIF++LL+S  ++++E+A  ALGN+A DS   RD VL+   L PLL L +    L+M R A   LSNLC G +P P F +V P L  L+ L+  +D  VL DAC AL +L SD  NDKIQAVI+AGVC RLVELL H    V++ AL+ V     G  I   V   L C+A+          +  IKK ACW I NI AG  R +I   IDA  +
Sbjct:  162 TRNVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLNCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYL-SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVI--LNCSALQSLLHLLSSPKESIKKEACWTISNITAG-NRAQIQTVIDANMF 382          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_YEAST (Importin subunit alpha OS=Saccharomyces cerevisiae GN=SRP1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.755e-33
Identity = 98/232 (42.24%), Postives = 135/232 (58.19%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLCSG-NPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDA 711
            + +   ++  TKVV+D  AVP+F++LL +    ++E+A  ALGNVA DS  +RD VL   A+ P+L L N++   S+ R AT TLSNLC G  P+P +  V  ALP LA+L++S D + L DAC A+ +L SD   + IQAVI+  +  RLVELL H S  V T AL+ V     G  +   V   +    +P   +     +  IKK ACW I NI AG T ++I A IDA
Sbjct:  156 TNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYL-SDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVV--INAGVLPALRLLLSSPKENIKKEACWTISNITAGNT-EQIQAVIDA 382          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA_DROME (Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 6.671e-33
Identity = 91/235 (38.72%), Postives = 132/235 (56.17%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLC-SGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAGFY 720
            + +   +++ T+ VI+H AVP FV LL S   N+ E+A  ALGN+A D    RD+V+    +  +L L+NN   LS  R     +SNLC + NP P F+QV+  LP L+QL+ S D QVL DAC AL +++ D  N KIQAV+++   PRLV+LL    PS++  AL++V     G      V   +    +P   +    ++  I K A W + NI AG  +K+I A I AG +
Sbjct:  138 TNIASGTSDQTRCVIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGDGAAARDIVIHHNVIDGILPLINNETPLSFLRNIVWLMSNLCRNKNPSPPFDQVKRLLPVLSQLLLSQDIQVLADACWALSYVTDD-DNTKIQAVVDSDAVPRLVKLLQMDEPSIIVPALRSVGNIVTGTDQQTDVV--IASGGLPRLGLLLQHNKSNIVKEAAWTVSNITAG-NQKQIQAVIQAGIF 368          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA2_XENLA (Importin subunit alpha-2 OS=Xenopus laevis GN=kpna2 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 8.154e-31
Identity = 82/225 (36.44%), Postives = 124/225 (55.11%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLC-SGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIR-----IKKFACWIIGNIPAG 675
            + +   +++ TK V+D GA+P F+ L++SP  +I E+A  ALGN+A D P +RD ++S   + PLLTL+N    L   R  T TLSNLC + NP P    V   LP L QL+   D+ +L+D C A+ +L +D  ND+I  V++ G+  RL++L+  P  S+LT +L+TV     G              A+  G +  +   +R     I+K A W + NI AG
Sbjct:  142 TNIASGTSDQTKSVVDGGAIPAFISLISSPHLHISEQAVWALGNIAGDGPLYRDALISCNVIPPLLTLVNPQTPLGYLRNITWTLSNLCRNKNPYPPMSAVLQILPVLTQLMLHEDKDILSDTCWAMSYL-TDGSNDRIDVVVKTGLVERLIQLMYSPELSILTPSLRTVGNIVTGTDKQTQ-------AAIDAGVLSVLPQLLRHQKPSIQKEAAWALSNIAAG 358          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA1_XENLA (Importin subunit alpha-1 OS=Xenopus laevis GN=kpna1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.065e-30
Identity = 80/225 (35.56%), Postives = 124/225 (55.11%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLC-SGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIR-----IKKFACWIIGNIPAG 675
            + +   +++ TK V+D GA+P F+ L++SP  +I E+A  ALGN+A D P +RD +++   + PLL L+N    L   R  T  LSNLC + NP P    V   LP L QL+H +D+ +L+D C A+ +L +D  ND+I  V++ G+  RL++L+  P  S++T +L+TV     G              A+  G +  +   +R     I+K A W I NI AG
Sbjct:  142 TNIASGTSDQTKSVVDGGAIPAFISLISSPHLHISEQAVWALGNIAGDGPLYRDALINCNVIPPLLALVNPQTPLGYLRNITWMLSNLCRNKNPYPPMSAVLQILPVLTQLMHHDDKDILSDTCWAMSYL-TDGSNDRIDVVVKTGIVDRLIQLMYSPELSIVTPSLRTVGNIVTGTDKQTQ-------AAIDAGVLSVLPQLLRHQKPSIQKEAAWAISNIAAG 358          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA2_MOUSE (Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.373e-30
Identity = 84/224 (37.50%), Postives = 124/224 (55.36%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLN----NHANLSMKRRATRTLSNLC-SGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAG 675
            + +   ++E TK V+D GA+P F+ LLASP  +I E+A  ALGN+A D   FRDLV+   A+ PLL LL     +       R  T TLSNLC + NP P  + V   LP L +L+H ND +VL D+C A+ +L +D  N++I+ V++ GV P+LV+LLG     ++T AL+ +     G    +     +   A+        + +  I+K A W + NI AG
Sbjct:  145 TNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYL-TDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTG--TDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAG 365          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA4_MOUSE (Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.474e-29
Identity = 83/232 (35.78%), Postives = 125/232 (53.88%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLC-SGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDA 711
            + +   ++E T+ V+   AVP+F++LL SP  N+ E+A  ALGN+  D P+ RD V+S   + PLL+ ++    ++  R  T  + NLC   +P P  E ++  LPAL  L+H  D  +L D   AL +L +D  N++IQ VI++G+ P LV LL H    V TAAL+ V     G      V   L C A+          + +I K A W + NI AG  ++++ A IDA
Sbjct:  140 TNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYL-TDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVV--LNCDALSHFPALLTHPKEKINKEAVWFLSNITAG-NQQQVQAVIDA 367          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA4_HUMAN (Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.474e-29
Identity = 83/232 (35.78%), Postives = 125/232 (53.88%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLC-SGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDA 711
            + +   ++E T+ V+   AVP+F++LL SP  N+ E+A  ALGN+  D P+ RD V+S   + PLL+ ++    ++  R  T  + NLC   +P P  E ++  LPAL  L+H  D  +L D   AL +L +D  N++IQ VI++G+ P LV LL H    V TAAL+ V     G      V   L C A+          + +I K A W + NI AG  ++++ A IDA
Sbjct:  140 TNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYL-TDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVV--LNCDALSHFPALLTHPKEKINKEAVWFLSNITAG-NQQQVQAVIDA 367          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA2_HUMAN (Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.474e-29
Identity = 87/224 (38.84%), Postives = 126/224 (56.25%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMK----RRATRTLSNLC-SGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAG 675
            + +   ++E TK V+D GA+P F+ LLASP  +I E+A  ALGN+A D   FRDLV+   A+ PLL LL      S+     R  T TLSNLC + NP P  + V   LP L +L+H +D +VL D C A+ +L +D  N++I  V++ GV P+LV+LLG     ++T AL+ +     G      V       AV F ++ + + +  I+K A W + NI AG
Sbjct:  145 TNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYL-TDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAV-FPSLLT-NPKTNIQKEATWTMSNITAG 365          
BLAST of EY735508 vs. ExPASy Swiss-Prot
Match: IMA3_MOUSE (Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.947e-28
Identity = 84/233 (36.05%), Postives = 125/233 (53.65%), Query Frame = 1
Query:   19 SRVDPASAEDTKVVIDHGAVPIFVKLLASPRDNIREKAASALGNVAIDSPRFRDLVLSEEALIPLLTLLNNHANLSMKRRATRTLSNLC-SGNPRPIFEQVRPALPALAQLVHSNDEQVLTDACRALFFLSSDRKNDKIQAVIEAGVCPRLVELLGHPSPSVLTAALQTVYKYCEGR*IPDSVYN*LWCTAVPFGAVESMDHEIRIKKFACWIIGNIPAGETRKKIPAGIDAG 714
            + +   ++  T+ V+   AVP+F++LL SP  N+ E+A  ALGN+  D P+ RD V+S   + PLL+ +N    ++  R  T  + NLC + +P P  E V+  LPAL  L++  D  +L D   AL +L +D  N++IQ VI++GV P LV LL H    V TAAL+ V     G      V   L C  +          + +I K A W + NI AG  ++++ A IDAG
Sbjct:  140 TNIASGTSAQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFINPSIPITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALSYL-TDGGNEQIQMVIDSGVVPFLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVV--LNCDVLSHFPNLLSHPKEKINKEAVWFLSNITAG-NQQQVQAVIDAG 368          
The following BLAST results are available for this feature:
BLAST of EY735508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
IMA1_MOUSE2.215e-3646.22Importin subunit alpha-1 OS=Mus musculus GN=Kpna1 ... [more]
IMA1_YEAST1.755e-3342.24Importin subunit alpha OS=Saccharomyces cerevisiae... [more]
IMA_DROME6.671e-3338.72Importin subunit alpha OS=Drosophila melanogaster ... [more]
IMA2_XENLA8.154e-3136.44Importin subunit alpha-2 OS=Xenopus laevis GN=kpna... [more]
IMA1_XENLA1.065e-3035.56Importin subunit alpha-1 OS=Xenopus laevis GN=kpna... [more]
IMA2_MOUSE2.373e-3037.50Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 ... [more]
IMA4_MOUSE4.474e-2935.78Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 ... [more]
IMA4_HUMAN4.474e-2935.78Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 ... [more]
IMA2_HUMAN4.474e-2938.84Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 ... [more]
IMA3_MOUSE4.947e-2836.05Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735508 ID=EY735508; Name=EY735508; organism=Citrus sinensis; type=EST; length=1050bp
ACCGCCGACGCGTCGGATTCCCGGGTCGACCCCGCGTCCGCGGAGGACAC
TAAGGTGGTGATTGACCACGGTGCTGTTCCAATATTTGTGAAACTACTTG
CTTCTCCAAGAGATAATATCCGGGAGAAGGCTGCTTCGGCATTGGGAAAT
GTTGCTATTGACTCGCCTAGATTCCGTGATCTTGTGCTTAGTGAAGAAGC
TCTAATTCCATTGTTAACACTGTTAAATAACCATGCAAACCTTTCAATGA
AGAGAAGAGCCACACGGACGTTGTCTAATTTATGCAGCGGCAATCCACGA
CCAATATTTGAACAGGTGAGACCAGCTCTTCCGGCGCTTGCGCAGCTTGT
TCATTCAAATGATGAACAGGTCTTGACTGATGCTTGCCGGGCACTCTTCT
TTCTTTCTAGTGATCGTAAGAATGACAAAATTCAAGCTGTGATTGAGGCA
GGTGTCTGTCCACGACTTGTTGAGCTCCTTGGTCATCCATCACCCTCAGT
GCTTACTGCTGCCCTGCAGACTGTTTACAAATATTGTGAGGGGAGATGAA
TTCCAGACTCAGTGTATAATTAACTGTGGTGCACTGCCGTACCTTTTGGG
GCTGTTGAATCCATGGATCATGAAATTCGCATTAAGAAATTTGCATGCTG
GATTATTGGCAATATTCCAGCTGGGGAAACAAGGAAAAAAATTCCGGCGG
GAATTGATGCTGGCTTTTATTGGGCCCCCTTTGCAACCTGCTTCCAAAAT
GTTAAATTTTGATATAAAGGGATGGGGCCCCCAGGGGCCATTTTCAAACG
GCCCCCAGGGTTGAACACTCCTGAACCAAATTCGGTTATCTCCTGGGAAA
AAGGGGGGGGGAAAAAAACCATGTGGGGGGATCCCTTTTTTTTGGGGCTC
AATTCCAAAAAAATCGCCTCGGGTTTTGGCTTAAAAGAGGGGTTTAAAAA
AAAATTTTTTTGAAGAGGGCGGGGGGGAAAGCGCATTGAAAAAAAAAAAA
ATTTGGGCAACCCCCCTCACCCTTATGGGTGAAAAAGATTGTTTTTGCAC
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