EY735479
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: EPA2A_XENLA (Embryonic polyadenylate-binding protein 2-A OS=Xenopus laevis GN=epabp2-A PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.259e-19 Identity = 42/79 (53.16%), Postives = 60/79 (75.95%), Query Frame = 2 Query: 263 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 K+E D RSV+VGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+AY+EF E ++V A+ ++E+ GR +KV Sbjct: 87 KKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVTMDETVFRGRTIKV 165 HSP 2 Score: 25.0238 bits (53), Expect = 1.259e-19 Identity = 15/47 (31.91%), Postives = 19/47 (40.43%), Query Frame = 3 Query: 492 RFLPKRDNVPGMKPVSSKAFQSLTWGTEGGGPYVPPYFLFPFRDMGR 632 + LPKR N+PG+ F+ G G PFR GR Sbjct: 164 KVLPKRTNMPGISSTDRGGFRGRPRGNRGNYQRGQRPRGRPFRGCGR 210
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: PABP2_DICDI (Polyadenylate-binding protein 2 OS=Dictyostelium discoideum GN=pabpn1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.870e-19 Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 263 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKVFT*EGQCPWYETSIVQGVSIPYL-GYRGRR 583 +EE DSRSV+VGNVDY T +++ +FQSCGTVNR+TIL+DK G PKG YVEF+ +++ A+ LN+S + RQLK+ P+Y + QGV P G+RG R Sbjct: 95 QEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESIINAMALNDSFFNERQLKITPKRTNLPYY---MRQGVLPPGRGGFRGGR 200
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: EPAB2_HUMAN (Embryonic polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPNL1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.245e-17 Identity = 58/147 (39.46%), Postives = 78/147 (53.06%), Query Frame = 2 Query: 194 QAKVEKEMGAAQ----DPANV----AANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKVFT*EGQCPWYETSI---------VQGVSIPYLGYRGR 580 Q + E+E G A P V + K EAD RSV+VGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY+EF +VQ A+ L++S GR +KV P ++ +G P+ G +GR Sbjct: 110 QQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSRGAPFPHSGLQGR 256
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: EPAB2_RAT (Embryonic polyadenylate-binding protein 2 OS=Rattus norvegicus GN=Pabpnl1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.231e-16 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 269 EADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 EAD RSV+VGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+EF +VQ A+ L+ES GR +KV Sbjct: 135 EADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQAAVRLDESTFRGRVIKV 211
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: EPAB2_MOUSE (Embryonic polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpnl1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.231e-16 Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 251 NQASKE--EADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 ++ SKE EAD RSVFVGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+EF +V+ A+ L+ES GR +KV Sbjct: 131 SRTSKENVEADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKAAVGLDESTFRGRVIKV 215
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: SGN1_YEAST (RNA-binding protein SGN1 OS=Saccharomyces cerevisiae GN=SGN1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 8.351e-14 Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 257 ASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 A + EADSRS+FVGN+ TPE+++ HF+ CG + R+T+L D+ G PKG+ Y+EF ++AL LN EL G+++ V Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLNGGELKGKKIAV 136
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: YQOC_CAEEL (Putative RNA-binding protein EEED8.12 OS=Caenorhabditis elegans GN=EEED8.12 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.509e-12 Identity = 40/102 (39.22%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 194 QAKVEKEMGAAQDPANVAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 Q K+ K + +A A V + ++ D++SVF+GNVD+ T EEV++HF+ CG + R TI DKF + K FAY+EF + +++ AL +N S R + V Sbjct: 35 QNKMAKNLESA---AYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVV 133
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: YQO4_CAEEL (Putative RNA-binding protein EEED8.4 OS=Caenorhabditis elegans GN=EEED8.4 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 7.817e-12 Identity = 38/102 (37.25%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 194 QAKVEKEMGAAQDPANVAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 Q K+ K + +A A V + ++ D++SVF+GNVD+ T EE+++HF+ CG + + TI DKF + K FAY+EF + +++ AL +N S R + V Sbjct: 29 QNKMAKHLESA---AYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVV 127
BLAST of EY735479 vs. ExPASy Swiss-Prot
Match: RBM34_HUMAN (RNA-binding protein 34 OS=Homo sapiens GN=RBM34 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.970e-11 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 275 DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALPLNESELHGRQLKV 496 D RSVFVGN+ Y +++HF CG++ V I+ DK G KGF YV F D+V AL LN SEL GR+L+V Sbjct: 285 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRV 359 The following BLAST results are available for this feature:
BLAST of EY735479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735479 ID=EY735479; Name=EY735479; organism=Citrus sinensis; type=EST; length=993bpback to top |