EY735448

Overview
NameEY735448
Unique NameEY735448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1052
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 6.919e-22
Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSPFLAQ 408
            YE  S WG E+G +YG+  ED LTG  +H++GWRS YC+P   AF G A  +    + Q  RWA G +EILFS+  PI     G+L+F +  AY+    + + SIP L Y  LPA C+ TN   + Q
Sbjct:  745 YEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQ 871          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.180e-21
Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIIT 387
            YE  S WG E+G +YG+  ED LTG  +H++GWRS YC+P   AF G A  +    + Q  RWA G +EILFS+  PI     G+L+F +  AY+    + L SIP L Y  LPA C++T
Sbjct:  753 YEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLT 872          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.180e-21
Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIIT 387
            YE  S WG E+G +YG+  ED LTG  +H++GWRS YC+P   AF G A  +    + Q  RWA G +EILFS+  PI     G+L+F +  AY+    + L SIP L Y  LPA C++T
Sbjct:  753 YEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLT 872          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.013e-21
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNS 393
            YE  + WG E+G +YG+  ED LTG  +H++GW S YC+P   AF G A  +    + Q  RWA G +EIL S+  PI     G+L+  + +AY+  + + + SIP L Y  LPA+C+ITN+
Sbjct:  747 YEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNT 868          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.013e-21
Identity = 53/120 (44.17%), Postives = 72/120 (60.00%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIIT 387
            YE  + WG E+G +YG+  ED LTG  +H++GWRS YC+P   AF G A  +    + Q  RWA G +EILFS+  PI     G+L+F +  AY+    + L SIP L Y  LPA C++T
Sbjct:  761 YEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLT 880          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.226e-20
Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIIT 387
            YE  + WG E+G +YG+  ED LTG  +H +GW+S YC+P   AF G A  +    + Q  RWA G +EI FS+  P+     GKL+  + LAY+  + +   SIP L Y  +PA C++T
Sbjct:  728 YEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLT 847          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.958e-20
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITN 390
            YE  + WG E+G +YG+  ED LTG  +H++GW S YC+P    F G A  +    + Q  RWA G +EIL S+  PI     G+L+  + LAY+  + + + SIP + Y  LPA C++TN
Sbjct:  755 YEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTN 875          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.958e-20
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITN 390
            YE  + WG E+G +YG+  ED LTG  +H++GW S YC+P    F G A  +    + Q  RWA G +EIL S+  PI     G+L+  + LAY+  + + + SIP + Y  LPA C++TN
Sbjct:  755 YEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTN 875          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.458e-20
Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITN 390
            YE  + WG E+G +YG+  ED LTG  +H++GW S YC P   AF G A  +    + Q  RWA G +EIL S+  PI     G+L+  + +AY+  + + + SIP + Y  LPA+C+IT+
Sbjct:  760 YEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITD 880          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.461e-19
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIIT 387
            YE  + WG E+G +YG+  ED LTG  +H  GWRS YC+P   AF G A  +    + Q  RWA G +EI FSK  P+     G L+F +  +Y+  + +   SIP L Y  LPA C++T
Sbjct:  772 YEDKTDWGKEIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLT 891          
The following BLAST results are available for this feature:
BLAST of EY735448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CESA3_ARATH6.919e-2243.31Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA2_ORYSJ1.180e-2145.00Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI1.180e-2145.00Probable cellulose synthase A catalytic subunit 2 ... [more]
CESAA_ARATH2.013e-2141.80Probable cellulose synthase A catalytic subunit 10... [more]
CESA8_ORYSJ2.013e-2144.17Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA4_ARATH2.226e-2040.83Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA1_ORYSJ4.958e-2040.50Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI4.958e-2040.50Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ARATH8.458e-2040.50Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESA6_ORYSJ2.461e-1941.67Probable cellulose synthase A catalytic subunit 6 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735448 ID=EY735448; Name=EY735448; organism=Citrus sinensis; type=EST; length=1052bp
AGCACACCGAGTTGCAGATTGCTCCGTTATGAGTATGGTAGTAGCTGGGG
TGATGAGGTGGGGTGCTTGTATGGCGCCACAGCAGAAGATAACTTAACTG
GCTTGGTGATCCATTCAAAAGGCTGGAGATCAGGCTACTGCTTGCCGATC
CCACATGCCTTTCTTGGCTGTGCGTCTCCCAGCGGCCCTGCTGGGATGAG
ACAACAGAAAAGGTGGGCCACGGGACTGCTTGAAATCCTATTCAGCAAAC
GTAACCCCATATTGGCTACTCTCATCGGGAAGCTCCAATTTCGACAATGT
TTGGCTTATTTGTGGATCCTTACTTGGGGCTTGCGCTCAATTCCCGAGCT
GTGCTACATTGCCCTTCCAGCTTATTGCATCATCACCAACTCCCCTTTCC
TGGCCCAAGGTCCAGGAACCAACCGTATTGATCCCTCTTGCACTTTTTTT
TTGATCTACAAATTATATACTCTATTAAAGTACATTCAAGCTGGTTTATC
AATCCCGTTCATGGTGGGTTAACAATTGTAATGGCCCGAATTGGTCACAA
CCAGGTGGCATGGTTTATTTTGGGTCTTTGAAAAACGCCCCCGCACCGAC
CAATTTTTGGAATTCCTCCCCAAGGCAGTTTTTTTAAAATTACCCCAAAA
AAATTCCTCCCAATCTAACCAATGTCAAAAAAAAATGAAGGTTCGACCAC
CTCCCCCTTTTTCTTTTGTTCCCCGGGACCCCCCAATTTATTCAGGGGGC
ACCCCTCGCTAAGCGTGGGGGGACACACCGGCTTGGATAAGGGGTGGCAA
ACACCAAAGGGGGGCGAATGGGCAAACGGGGCACAAAAAAAACTCCATTT
TTACGCGGGGTGATATAGAGGGGCGGGTAATGATCTATTATTTTTTTTTT
TTTTACGGAAGAAGGTATAATTCTACAGAAAGAGGGGAAAAACACAAGGG
AGAGACCCCCCGGGTGGTTATCACCTACATCGTTTGGCAAAAGAACTAAC
TCACTGATCTTATCTATTTTGCGCATCCATTCTTTTCTTTATTATTTTAT
AT
back to top