EY735448

Overview
NameEY735448
Unique NameEY735448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1052
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.491e-12
Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSPFL 402
            YE G+SWG +VG +Y    ED +TG  +H +GWRS Y    P AF G A  +    + Q  RW+ G LE+ FS  N +LA    +L   Q +AYL + T+ + ++    Y   P   +I+   ++
Sbjct:  529 YEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALLAG--RRLHPLQRVAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYI 651          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.446e-11
Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSPFLAQ 408
            Y+ G+SWG + G +Y    ED  TG  +H +GWRS Y    P AF G A  +    + Q  RW+ G LE+ FS  N +LA    +L   Q +AYL + T+ + ++    Y   P   +I+   ++ Q
Sbjct:  568 YDLGTSWGRDAGWVYDIATEDVATGFRMHQQGWRSVYTSMEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALLAG--RRLHPLQRIAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQQ 692          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.446e-11
Identity = 44/134 (32.84%), Postives = 68/134 (50.75%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSPFLAQGPGTNRI 429
            ++  + WG  VG +Y    ED +TG  IH +GWRS YC     AF G A  +    + Q  RW+ G LE+ FS  NP++     +LQ  Q ++YL +  + + S+  L Y   P   +I +  ++ Q P T  +
Sbjct:  553 FDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLIGG--RRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYI-QRPFTRYV 683          
BLAST of EY735448 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.446e-11
Identity = 44/134 (32.84%), Postives = 68/134 (50.75%), Query Frame = 1
Query:   28 YEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSPFLAQGPGTNRI 429
            ++  + WG  VG +Y    ED +TG  IH +GWRS YC     AF G A  +    + Q  RW+ G LE+ FS  NP++     +LQ  Q ++YL +  + + S+  L Y   P   +I +  ++ Q P T  +
Sbjct:  553 FDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLIGG--RRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYI-QRPFTRYV 683          
The following BLAST results are available for this feature:
BLAST of EY735448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CSLF1_ORYSJ6.491e-1235.20Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]
CSLF4_ORYSJ1.446e-1133.86Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLF3_ORYSJ1.446e-1132.84Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLF3_ORYSI1.446e-1132.84Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735448 ID=EY735448; Name=EY735448; organism=Citrus sinensis; type=EST; length=1052bp
AGCACACCGAGTTGCAGATTGCTCCGTTATGAGTATGGTAGTAGCTGGGG
TGATGAGGTGGGGTGCTTGTATGGCGCCACAGCAGAAGATAACTTAACTG
GCTTGGTGATCCATTCAAAAGGCTGGAGATCAGGCTACTGCTTGCCGATC
CCACATGCCTTTCTTGGCTGTGCGTCTCCCAGCGGCCCTGCTGGGATGAG
ACAACAGAAAAGGTGGGCCACGGGACTGCTTGAAATCCTATTCAGCAAAC
GTAACCCCATATTGGCTACTCTCATCGGGAAGCTCCAATTTCGACAATGT
TTGGCTTATTTGTGGATCCTTACTTGGGGCTTGCGCTCAATTCCCGAGCT
GTGCTACATTGCCCTTCCAGCTTATTGCATCATCACCAACTCCCCTTTCC
TGGCCCAAGGTCCAGGAACCAACCGTATTGATCCCTCTTGCACTTTTTTT
TTGATCTACAAATTATATACTCTATTAAAGTACATTCAAGCTGGTTTATC
AATCCCGTTCATGGTGGGTTAACAATTGTAATGGCCCGAATTGGTCACAA
CCAGGTGGCATGGTTTATTTTGGGTCTTTGAAAAACGCCCCCGCACCGAC
CAATTTTTGGAATTCCTCCCCAAGGCAGTTTTTTTAAAATTACCCCAAAA
AAATTCCTCCCAATCTAACCAATGTCAAAAAAAAATGAAGGTTCGACCAC
CTCCCCCTTTTTCTTTTGTTCCCCGGGACCCCCCAATTTATTCAGGGGGC
ACCCCTCGCTAAGCGTGGGGGGACACACCGGCTTGGATAAGGGGTGGCAA
ACACCAAAGGGGGGCGAATGGGCAAACGGGGCACAAAAAAAACTCCATTT
TTACGCGGGGTGATATAGAGGGGCGGGTAATGATCTATTATTTTTTTTTT
TTTTACGGAAGAAGGTATAATTCTACAGAAAGAGGGGAAAAACACAAGGG
AGAGACCCCCCGGGTGGTTATCACCTACATCGTTTGGCAAAAGAACTAAC
TCACTGATCTTATCTATTTTGCGCATCCATTCTTTTCTTTATTATTTTAT
AT
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