EY735442

Overview
NameEY735442
Unique NameEY735442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 3.511e-23
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            +GH YF LV +T VGG+G V  +SIKGS TGW AMSRNWG NWQSN+YL GQSLSF +   DGR VT+ NV P NW
Sbjct:  167 SGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNW 242          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.988e-23
Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGHSYF LVL+T VGG+G V  + IKGS TGW AMSRNWG NWQSN+ L+GQ+LSF++ A DGR VT+ +V P  W
Sbjct:  163 NGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGW 238          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.821e-23
Identity = 50/76 (65.79%), Postives = 56/76 (73.68%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NG  YFNLVLIT V GAGD+   S+KG+ TGW  MSRNWGQNWQSNS L GQ+LSF++T SD RT TS N  P  W
Sbjct:  176 NGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGW 251          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.821e-23
Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NG+SYF LVLIT VGG G + SV IKG+KTGW  MSRNWG NWQ+N+YLN Q++SF +T++ G+T+   +V P NW
Sbjct:  162 NGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNW 237          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.881e-22
Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NG  YFNLVL+T V GAG++  + +KG+ T W  MSRNWGQNWQSNS L GQSLSF++T+SD R+ TS N+ P NW
Sbjct:  169 NGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANW 244          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.475e-21
Identity = 48/76 (63.16%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            +G  YF LV +  VGG+G V  VSIKGSKT W AMSRNWGQNWQSN+YLN QSLSF++   D R VT  N+ P NW
Sbjct:  161 SGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNW 236          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.631e-20
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 2
Query:   44 GHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            G S+F  VLI+ VGGAGDV SV IKG+++GW +M RNWGQ W  NS   GQ LSF+LT+SDG+T+T+ NVVP  W
Sbjct:  170 GRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEW 244          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.782e-20
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 2
Query:   44 GHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            GH Y+ LVL+T V G+G V +  +KGS T W +MSRNWG+NWQSN+YL GQ+LSF++ A DG  VT+ +V P NW
Sbjct:  166 GHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.057e-19
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NG +YF LVLI+ V G G++  V IKGSK+  W+ MSRNWG N+QSN+YLNGQSLSF++  SDG    + NVVP NW
Sbjct:  167 NGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNW 243          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 3.075e-19
Identity = 43/76 (56.58%), Postives = 59/76 (77.63%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            +G +YF LVLIT V G+G V ++S+KGSKTGW  ++RNWG NWQ NS L GQ+LSF++T++ G+T+  N+VVP  W
Sbjct:  166 SGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWW 241          
The following BLAST results are available for this feature:
BLAST of EY735442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
EXPA3_ORYSJ3.511e-2365.79Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA8_ORYSJ5.988e-2364.47Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA7_ORYSJ7.821e-2365.79Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP12_ORYSJ7.821e-2360.53Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA6_ARATH3.881e-2261.84Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXP33_ORYSJ1.475e-2163.16Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP10_ORYSJ1.631e-2061.33Expansin-A10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA9_ORYSJ2.782e-2057.33Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP17_ARATH1.057e-1959.74Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP28_ORYSJ3.075e-1956.58Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-B01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735442 ID=EY735442; Name=EY735442; organism=Citrus sinensis; type=EST; length=1022bp
CCACGCGTCCGGAAGAAAGGAGGAATAAGGTTCCCCTTTTAATGGACACT
CATACTTCAACCTGGTTTTGATCACACCTGTCGGAGGAGCAGGAGATGTA
CATTCAGTATCAATCAAGGGTTCAAAGACTGGATGGCAAGCAATGTCAAG
GAACTGGGGCCAAAATTGGCAGAGCAATTCTTATCTTAACGGCCAAAGTC
TTTCTTTCCAATTGACAGCCAGTGACGGCAGGACTGTGACTAGCAACAAT
GTTGTGCCTGGAAATTGGCAATTTGGGCAAACCTTTGAGGGTGGTCAGTT
TTAGATTTTAAAAAAGTGAATCAGAATTTGTATATTTAATTGAATTTGGC
ACTGTTTGTGAGGGAGGAAGGGTGAGAATAGGGGTAGGTGAGGCTCAGGC
CTGGCCGATGTGGCCTGTCTTGTTGCTGTGGTGGTCTGTTGGCACCCGCT
AGGCCTCTATAAATAGAAATGATTGTGTTCTAAATATAGTTATTACTTCA
ATTGAATGAACGGGTATAAATTTCATTTCTATCAAATATATATACAAAAA
ATATAACTACTTCAACTATTATATAAAAATAAAATTTAAAAGGGAAATGG
GGCGGCCCCTCAAAAAGAACCAAACTTAAATATACGCGGGCTGGCAAACT
CAAAGCCCTTTCAAAAGGGGCACCCAAAATTAATTCCCGTGGGCCGCCTT
TTAAAAACGCCCGGACCGGGGAAAAACCCGGGGGTTACCCCATAATAATC
CCCTTCGCACCCCATCCCCCTTTTCCCCCACTTGGGATAAAATCAGGAAA
AGAGCCCCCCCCATTCCCCCCTTTTCCAAATTTTTCCCACCCCCTTAAAG
GGGAAAAGGGAACCCACCCCTGTATCCGCCCCCCAATATTACCGCGGAGG
GGGGGTGGGGGGGTTAACCCCCCGGAGAGGGCACCCCCACACATTTTGGG
CGAGCCCCTCCACCCCCCCCCCCCTCCTATTTTAATTCTTTTTTTTCTCT
TCTTTTTTTTTTTTTCACTCCA
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