EY735442

Overview
NameEY735442
Unique NameEY735442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.879e-17
Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NG +YF LVL+T + G+G + S+S+KGS TGW  M+RNWG NWQ  + L GQ+LSF +T++ G+T+  ++ VP  W
Sbjct:  160 NGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 235          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.759e-17
Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NG +YF LVL+T + G+G + S+S+KGS TGW  M+RNWG NWQ  + L GQ+LSF +T++ G+T+  ++ VP  W
Sbjct:  151 NGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 226          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.759e-17
Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGH YF LVL+T VG AG + ++ +KGSK+  W AM+ NWG  W S +YL GQ LSF++T +DG+T+   NVV   W
Sbjct:  173 NGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.910e-17
Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGH YFNLVL+T V   G + S+ + GS  T W  M RNWG NW S SYL GQ LSF++T  DG+T+   N+VP  W
Sbjct:  191 NGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.429e-16
Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 2
Query:   41 NGHSYFNLVLITPVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            NGH YF LVL+T V  AG + S+ + GS T  W  M+RNWG  W S +YL GQ LSF++T +D +T+   NVVP  W
Sbjct:  178 NGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.183e-16
Identity = 39/78 (50.00%), Postives = 58/78 (74.36%), Query Frame = 2
Query:   38 FNGHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 268
            F G+SY+ L+ +  VGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSLSF++T+ + G T+ + NV P NW
Sbjct:  172 FQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.157e-16
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 2
Query:   44 GHSYFNLVLITPVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            G   FN+V+I+ VGG G V SV+++GSK   W  M+RNWG NWQS+  L GQ LSF++T +D +T T  NVVP +W
Sbjct:  163 GQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSW 238          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.209e-15
Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 2
Query:   44 GHSYFNLVLITPVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            G+ YFNLV+++ VGGAGDV  +S+KG+K   W  + RNWGQ WQ++  L G+SL+F++   D R  TS +V+P +W
Sbjct:  181 GNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDW 256          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.209e-15
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 2
Query:   44 GHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            G + F  VLIT V   G+V +V +KGS+TGW  M RNWGQNWQ ++ L GQ LSF++T   GRTV + +V P +W
Sbjct:  173 GGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDW 247          
BLAST of EY735442 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.596e-15
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 2
Query:   44 GHSYFNLVLITPVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 268
            G +YF LVLIT V G+G V S  IKG+ TGW  MSRNWG NWQS + L GQ+LSF +T + G+ +   +V P  W
Sbjct:  168 GLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWW 242          
The following BLAST results are available for this feature:
BLAST of EY735442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
EXP19_ORYSJ2.879e-1750.00Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ORYSJ3.759e-1750.00Expansin-A20 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP13_ORYSJ3.759e-1751.95Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ORYSJ4.910e-1753.25Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP23_ORYSJ1.429e-1650.65Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ARATH3.183e-1650.00Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP12_ARATH4.157e-1652.63Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP32_ORYSJ1.209e-1548.68Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP16_ORYSJ1.209e-1552.00Expansin-A16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP31_ORYSJ4.596e-1553.33Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-109-B01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735442 ID=EY735442; Name=EY735442; organism=Citrus sinensis; type=EST; length=1022bp
CCACGCGTCCGGAAGAAAGGAGGAATAAGGTTCCCCTTTTAATGGACACT
CATACTTCAACCTGGTTTTGATCACACCTGTCGGAGGAGCAGGAGATGTA
CATTCAGTATCAATCAAGGGTTCAAAGACTGGATGGCAAGCAATGTCAAG
GAACTGGGGCCAAAATTGGCAGAGCAATTCTTATCTTAACGGCCAAAGTC
TTTCTTTCCAATTGACAGCCAGTGACGGCAGGACTGTGACTAGCAACAAT
GTTGTGCCTGGAAATTGGCAATTTGGGCAAACCTTTGAGGGTGGTCAGTT
TTAGATTTTAAAAAAGTGAATCAGAATTTGTATATTTAATTGAATTTGGC
ACTGTTTGTGAGGGAGGAAGGGTGAGAATAGGGGTAGGTGAGGCTCAGGC
CTGGCCGATGTGGCCTGTCTTGTTGCTGTGGTGGTCTGTTGGCACCCGCT
AGGCCTCTATAAATAGAAATGATTGTGTTCTAAATATAGTTATTACTTCA
ATTGAATGAACGGGTATAAATTTCATTTCTATCAAATATATATACAAAAA
ATATAACTACTTCAACTATTATATAAAAATAAAATTTAAAAGGGAAATGG
GGCGGCCCCTCAAAAAGAACCAAACTTAAATATACGCGGGCTGGCAAACT
CAAAGCCCTTTCAAAAGGGGCACCCAAAATTAATTCCCGTGGGCCGCCTT
TTAAAAACGCCCGGACCGGGGAAAAACCCGGGGGTTACCCCATAATAATC
CCCTTCGCACCCCATCCCCCTTTTCCCCCACTTGGGATAAAATCAGGAAA
AGAGCCCCCCCCATTCCCCCCTTTTCCAAATTTTTCCCACCCCCTTAAAG
GGGAAAAGGGAACCCACCCCTGTATCCGCCCCCCAATATTACCGCGGAGG
GGGGGTGGGGGGGTTAACCCCCCGGAGAGGGCACCCCCACACATTTTGGG
CGAGCCCCTCCACCCCCCCCCCCCTCCTATTTTAATTCTTTTTTTTCTCT
TCTTTTTTTTTTTTTCACTCCA
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