EY735394

Overview
NameEY735394
Unique NameEY735394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_YERPE (Beta-hexosaminidase OS=Yersinia pestis GN=nagZ PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.850e-35
Identity = 91/199 (45.73%), Postives = 119/199 (59.80%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVRPD-LLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA   + L++AVDQE         R R      PA     A+ D   A QLA++ GW+MA E++A+ +D+SFAPVLD+ +  SA +G R+F  DP++A ++A  FIRGM+SAGM  TGKHFPGHG   ADSH   P+D R L +IR +D+V F  L   K L A+MPA
Sbjct:   20 ILKHPLVGGLILF-SRNFHDAEQLRELVRQIRAASHERLVVAVDQE----GGRVQRFRDGFTRLPAAQYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHV-SAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_YERPS (Beta-hexosaminidase OS=Yersinia pseudotuberculosis GN=nagZ PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.993e-34
Identity = 90/199 (45.23%), Postives = 119/199 (59.80%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVRPD-LLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA   + L++AVDQE         R R      PA  +  A+ D   A QLA++ GW+MA E++A+ +D+SFAPVLD+ +  SA +G R+F  DP++A ++A  FIRGM+SAGM  TGKHFPGHG   ADSH   P+D R L +I  +D+V F  L   K L A+MPA
Sbjct:   20 ILKHPLVGGLILF-SRNFHDAEQLRELVRQIRAASHERLVVAVDQE----GGRVQRFRDGFTRLPAAQSFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHV-SAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETPHDNRPLAEILTHDMVIFRELIQRKLLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_YERPB (Beta-hexosaminidase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=nagZ PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.993e-34
Identity = 90/199 (45.23%), Postives = 119/199 (59.80%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVRPD-LLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA   + L++AVDQE         R R      PA  +  A+ D   A QLA++ GW+MA E++A+ +D+SFAPVLD+ +  SA +G R+F  DP++A ++A  FIRGM+SAGM  TGKHFPGHG   ADSH   P+D R L +I  +D+V F  L   K L A+MPA
Sbjct:   20 ILKHPLVGGLILF-SRNFHDAEQLRELVRQIRAASHERLVVAVDQE----GGRVQRFRDGFTRLPAAQSFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHV-SAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETPHDNRPLAEILTHDMVIFRELIQRKLLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_NITOC (Beta-hexosaminidase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=nagZ PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.993e-34
Identity = 95/193 (49.22%), Postives = 117/193 (60.62%), Query Frame = -1
Query:   52 VGGLKSFLPANMIIRPQVHELSAAIRAVR-PDLLLAVDQER------RPGAALAPRVRPACPAMRAL-ADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ-LAAVMPA 603
            VGG+  F   N     Q+  L  A+ A++ P LL+AVD E       R G  L P   PA    +    D   A++LA   GW+MA E+ AVG+D SF+PVLDLD   SAV+G RAF G+P+    LA A+IRGM  AGMAA GKHFPGHG   ADSH A+P D+RS  QIR  DL+PF  L++  L AVMPA
Sbjct:   28 VGGVILF-SRNYESPEQIAALIKAVHALKEPRLLVAVDHEGGRVQRFRDGFTLLP---PASLLGKLYDRDQRQAQRLAMITGWLMAVELRAVGVDFSFSPVLDLDRGVSAVIGDRAFHGEPDAVIALARAYIRGMAWAGMAAVGKHFPGHGSVVADSHTALPVDKRSWRQIREGDLLPFEHLARAGLPAVMPA 216          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_NEIMA (Beta-hexosaminidase OS=Neisseria meningitidis serogroup A GN=nagZ PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.993e-34
Identity = 90/204 (44.12%), Postives = 121/204 (59.31%), Query Frame = -1
Query:   37 LPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVR-PDLLLAVDQERRPGAALAPRVR--PACPAMRALAD------NPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ-LAAVMPAPRDFP 618
            L  P VGG+  F   N     Q+ EL+A I+A+R P+L++AVD E   G  +   +      PAM  L           AE  A Q GW++ATE+ A G+DLSF PVLDLD+   AV+G R+F  +PE  A LA A  +G+   GM + GKHFPGHG+ E DSH+ +P D RSL ++ A DL PF  +S++ +AAVMPA   +P
Sbjct:   28 LLDPAVGGVILFR-RNFQNIAQLKELTAEIKALRTPELIIAVDHE---GGRVQRFIEGFTRLPAMNVLGQIWDKDGASAAETAARQIGWVLATELSACGIDLSFTPVLDLDWGNCAVIGNRSFHRNPEAVARLALALQKGLEKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLSELEAADLAPFRIMSREGMAAVMPAHVVYP 227          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_PHOLL (Beta-hexosaminidase OS=Photorhabdus luminescens subsp. laumondii GN=nagZ PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.603e-34
Identity = 93/204 (45.59%), Postives = 123/204 (60.29%), Query Frame = -1
Query:   37 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIR-AVRPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPAPRDFP 621
            +L  P VGGL  F   N     Q+ EL   IR A R  L++AVDQE         R R      PA  +   L+DN N  QLAE+ GW+MA+E++A+ +D+SFAPVLDL +Q  A +G R+F  DPE+A ++A  FI+GM+SAGM +TGKHFPGHG   ADSH   P D+R LE I  +D+  F    ++  L A+MPA   +P
Sbjct:   20 ILQHPLVGGLILFT-RNFYDVEQLRELVRQIRKASRHRLVIAVDQE----GGRVQRFREGFTCLPAAQSFAGLSDNLNGTQLAEEAGWLMASEMIAMDIDISFAPVLDLGHQ-CAAIGERSFHEDPEQAKMMAEHFIKGMHSAGMKSTGKHFPGHGAVNADSHKETPCDDRPLEVICHHDMSIFRDFIQRNLLDAIMPAHVIYP 217          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_ERWCT (Beta-hexosaminidase OS=Erwinia carotovora subsp. atroseptica GN=nagZ PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.603e-34
Identity = 92/199 (46.23%), Postives = 121/199 (60.80%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVRPD-LLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGG+  F   N     Q+ EL   IRA   + L+++VDQE         R R      PA  A  AL     A++LAE+ GW+MA E++A+ +D+SFAPVLD+ +Q SA +G R+F   PE A  +A +FIRGM+SAGM  TGKHFPGHG   ADSH   P D R L +IRA+D++ F  L  S+QL A+MPA
Sbjct:   20 VLEHPLVGGVILFT-RNFHDVAQLRELVRQIRAASHERLVVSVDQE----GGRVQRFRDGFTRLPAAQAFAALNSVSEAQRLAEEGGWLMAAEMIAMDIDISFAPVLDIGHQ-SAAIGERSFHEQPEMALAVAQSFIRGMHSAGMKVTGKHFPGHGAVSADSHKETPRDPRPLAEIRAHDMLIFKALIQSQQLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_TOLAT (Beta-hexosaminidase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=nagZ PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.574e-34
Identity = 96/197 (48.73%), Postives = 115/197 (58.38%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIR-AVRPDLLLAVDQERRPGAALAPRVRPA---CPAMRALADNPN-AEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGG+  F   N   R Q+  L   IR A    LL+AVD E         R R      P M  L    N A  LA +CGW+MA E+LA  +DLSFAPVLDL+ + S V+G R+F  DPE+   LA AFI GM+ AGM ATGKHFPGHG   ADSH+  P D RS E+I A DLVPF  L  + +L A+MPA
Sbjct:   20 ILRHPTVGGVILF-GRNYHDRSQLSALVKTIRQAANKPLLIAVDHE----GGRVQRFRNGFSRIPPMGILHKARNQATDLATECGWLMAAELLAHDIDLSFAPVLDLE-RGSNVIGDRSFSSDPEQVIQLASAFIDGMHQAGMKATGKHFPGHGSVRADSHLESPRDNRSWEEIEATDLVPFRELIPAGKLDAIMPA 210          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_NEIG2 (Beta-hexosaminidase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=nagZ PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.574e-34
Identity = 88/201 (43.78%), Postives = 123/201 (61.19%), Query Frame = -1
Query:   37 LPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVR-PDLLLAVDQER-RPGAALAPRVR-PACPAMRALADNPNAEQL---AEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ-LAAVMPAPRDFP 618
            L  P +GG+  F   N     Q+  L+A I+A+R P+L++AVD E  R    +    R PA   +  + D+  AE     AE  GW++ATE+ A G+DLSF PVLDLD+   AV+G R+F  +PE  A LA A  +G+   GM + GKHFPGHG+ E DSH+ +P D RSL+++ A DL PF  +S++ +AAVMPA   +P
Sbjct:   28 LLDPAIGGIILFR-RNFQNIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMSTLGEIWDSEGAETAETHAEHIGWVLATELSACGIDLSFTPVLDLDWGNCAVIGNRSFHRNPEAVARLALALQKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLDELEAADLAPFRIMSREGMAAVMPAHVVYP 227          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_SHEON (Beta-hexosaminidase OS=Shewanella oneidensis GN=nagZ PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 7.933e-34
Identity = 92/209 (44.02%), Postives = 121/209 (57.89%), Query Frame = -1
Query:   25 ATLLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVRPDLLLAVDQER------RPGAALAPRVRPACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPAPRDFPTGRP 627
            A +L  P+VGGL  F   N   R Q+  L   IR +RP++L+AVD E       R G  L P +    PA  A  D   A++ A + G++MA E+LA  +DLSFAPVLDL+   S V+G R+F  +P+    LA +FI GM  AGM A GKHFPGHG   ADSH+A P DER  E I   D++PF  L  + +L+ +MPA   +P   P
Sbjct:   18 AEMLRHPQVGGLILF-SRNFTSREQLIALVQQIRQIRPEILIAVDHEGGRVQRFREGFTLIPAMGDILPA--AKGDMALAKRWACELGFLMAIELLACDIDLSFAPVLDLN-GISQVIGKRSFSANPDEVIALARSFIEGMAQAGMGAVGKHFPGHGSVAADSHIAQPIDEREGEVIFNQDILPFKELIFNGKLSGIMPAHVIYPKVDP 222          

HSP 2 Score: 23.483 bits (49), Expect = 7.933e-34
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = -2
Query:   12 HVIFPQVDPGNSG 50
            HVI+P+VDP  +G
Sbjct:  214 HVIYPKVDPNPAG 226          
The following BLAST results are available for this feature:
BLAST of EY735394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
NAGZ_YERPE6.850e-3545.73Beta-hexosaminidase OS=Yersinia pestis GN=nagZ PE=... [more]
NAGZ_YERPS1.993e-3445.23Beta-hexosaminidase OS=Yersinia pseudotuberculosis... [more]
NAGZ_YERPB1.993e-3445.23Beta-hexosaminidase OS=Yersinia pseudotuberculosis... [more]
NAGZ_NITOC1.993e-3449.22Beta-hexosaminidase OS=Nitrosococcus oceani (strai... [more]
NAGZ_NEIMA1.993e-3444.12Beta-hexosaminidase OS=Neisseria meningitidis sero... [more]
NAGZ_PHOLL2.603e-3445.59Beta-hexosaminidase OS=Photorhabdus luminescens su... [more]
NAGZ_ERWCT2.603e-3446.23Beta-hexosaminidase OS=Erwinia carotovora subsp. a... [more]
NAGZ_TOLAT7.574e-3448.73Beta-hexosaminidase OS=Tolumonas auensis (strain D... [more]
NAGZ_NEIG27.574e-3443.78Beta-hexosaminidase OS=Neisseria gonorrhoeae (stra... [more]
NAGZ_SHEON7.933e-3444.02Beta-hexosaminidase OS=Shewanella oneidensis GN=na... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-107-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735394 ID=EY735394; Name=EY735394; organism=Citrus sinensis; type=EST; length=1023bp
GGGGAACCGGGTCCGGAATTTCCCGGGTCGACCTGTGGGAAAATCACGTG
GGGCCGGCATGACGGCCGCCAACTGCTTGCTCAGGCGTGCAAAAGGCACC
AGGTCATTGGCGCGAATCTGTTCCAGGCTGCGCTCATCATTGGGAATCGC
GACGTGGGAATCGGCTTCGGCCCAGCCGTGGCCGGGGAAGTGTTTGCCGG
TAGCGGCCATGCCAGCGCTGTTCATCCCGCGAATAAAGGCACCGGCAAGC
ACCGCGGCGCGCTCGGGGTCGCCTTCGAATGCGCGCGTGCCCACGACTGC
GCTGCGCTGGTAATCGAGGTCCAGCACCGGCGCGAAGCTCAGGTCCAGGC
CGACCGCCAGCACTTCTGTCGCCATGATCCAACCGCACTGCTCGGCCAGT
TGCTCGGCATTCGGGTTGTCGGCCAAGGCGCGCATCGCCGGGCAGGCCGG
ACGAACCCTTGGCGCAAGCGCGGCACCCGGCCGCCTTTCCTGATCGACCG
CTAGCAACAGGTCCGGGCGCACGGCGCGAATCGCGGCGCTTAACTCATGC
ACCTGGGGGCGGATGATCATATTTGCCGGCAAAAATGATTTCAGGCCGCC
CACCCGGGGCTGGGGCAACAAAGTTGCGGTTTTTTAGCCGCCTAGCAGGT
CCCGGCGAACGACACTCCATCAAAAAAATCCTTGCCGGGCTTGGGGGCTA
AGAATTTCCTTTAAAAACCGTCCGACCTTCTGGAGCCCCTCCAGGGAGCT
TATCTCCTGGTGTTGTAATTTGGGAAAAGGTATCCACTTAAAAATGCACT
GGGATAGGGAGTTCTATGAAGCCACGCACTCCCCAGAGCCTGTATTACTT
TAAAAAAAAAATATTGGAGCGCCCATTTCGAAAGAATGATAAGGTTTTAT
CTGAGCGTATAAGTAAGCTGATATGTCCATAACCATCGTCAAGATGAGGT
TTGTACATCATTGACAATGTATTTTATAGTGTGAGCAGCATTGTTTATTA
TTACCAAATGCGCGGCGGGAAGC
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