EY735394

Overview
NameEY735394
Unique NameEY735394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_XYLF2 (Beta-hexosaminidase OS=Xylella fastidiosa (strain M23) GN=nagZ PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.866e-27
Identity = 84/196 (42.86%), Postives = 110/196 (56.12%), Query Frame = -1
Query:   25 NMIIRPQVHELSAAIRAVRP-DLLLAVDQERRPGAALAPRVR------PACPAMRALA-----DNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFAR-LSKQLAAVMPAPRDFPTGRP 573
            N   R Q+ ELSAA+R   P  LLLAVDQE         RV+       A P ++ +      D   A +LA +  W+MA+EV A G+DLSFAPV+DL     A+ G RAF  DP   A  A A+++GM++AGM  T KHFPGHG    D+HV +  D R+LE + + DLVPFA  ++    AVM A   +P   P
Sbjct:   33 NFASRAQIVELSAALREAAPRPLLLAVDQE-------GGRVQRFHEGYSALPPLQGIGALYVRDPEAALELAFEHAWLMASEVRASGVDLSFAPVVDLGRGNRAI-GDRAFSDDPHVVAAFAKAYVQGMHAAGMPVTLKHFPGHGSVLEDTHVDLAVDVRALETLESEDLVPFAAGIAAGADAVMMAHVVYPNVAP 220          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_HAEPS (Beta-hexosaminidase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=nagZ PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.968e-27
Identity = 83/196 (42.35%), Postives = 110/196 (56.12%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRA-VRPDLLLAVDQERRPGAALAPRVRPA---CPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            LL  P V GL  F   N   + Q+  L  ++R  V+  LL+ VDQE         R R      PAM++        QLA++ GW+M+ E+ A+ +DLSFAPVLDL +   A+ G R+F  D      +A AFI GM   GMAATGKHFPGHG   ADSH+  P D+R  E I  +D+ PF +L    +L+A+MPA
Sbjct:   18 LLEHPLVSGLILFT-RNFHDKAQLQALIKSVRQRVKKPLLITVDQE----GGRVQRFREGFTKLPAMQSFLQLDRL-QLAQEAGWLMSAEMFALDIDLSFAPVLDLGHCSKAI-GDRSFGEDVATMLPVAEAFIDGMREIGMAATGKHFPGHGHVIADSHLETPFDDRPKETIFNHDIQPFKQLIAKGKLSAIMPA 206          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_XYLFM (Beta-hexosaminidase OS=Xylella fastidiosa (strain M12) GN=nagZ PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.171e-26
Identity = 84/196 (42.86%), Postives = 109/196 (55.61%), Query Frame = -1
Query:   25 NMIIRPQVHELSAAIRAVRP-DLLLAVDQERRPGAALAPRVR------PACPAMRALA-----DNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFAR-LSKQLAAVMPAPRDFPTGRP 573
            N   R Q+ ELSAA+R   P  LLLAVDQE         RV+       A P ++ +      D   A +LA +  W+MA+EV A G+DLSFAPV+DL     A+ G RAF  DP   A  A A+++GM++AGM  T KHFPGHG    D+HV +  D R LE + + DLVPFA  ++    AVM A   +P   P
Sbjct:   33 NFASRAQIVELSAALREAAPRPLLLAVDQE-------GGRVQRFYEGYSALPPLQGIGALYVRDPEAALELAFEHAWLMASEVRASGVDLSFAPVVDLGRGNRAI-GDRAFSDDPHVVAAFAQAYVQGMHAAGMPVTLKHFPGHGSVLEDTHVDLAVDVRPLETLESEDLVPFAAGIAAGADAVMMAHVVYPNVAP 220          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_VIBFU (Beta-hexosaminidase OS=Vibrio furnissii GN=nagZ PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.295e-25
Identity = 83/201 (41.29%), Postives = 108/201 (53.73%), Query Frame = -1
Query:   37 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIR-AVRPDLLLAVDQERRPGAALAPRVRPA---CPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPAPRDFP 621
            +L  P VGG+  F   N     Q+  L+ AIR A +  +L+ VDQE         R R      PA +  A + N  QLAE  GW+MA E++A  +DLSFAPVLD  +   A+ G RAF  D +     + A++RGM S GMA TGKHFPGHG   ADSH+  P DER      A+D+  F    +   L A+MPA   +P
Sbjct:   20 ILAHPTVGGVILFA-RNYHDNQQLLALNTAIRQAAKRPILIGVDQE----GGRVQRFRDGFSKIPAAQLYARSDNGTQLAEDGGWLMAAELIAHDIDLSFAPVLDKGFDCRAI-GNRAFGDDVQTVLTYSSAYMRGMKSVGMATTGKHFPGHGAVIADSHLETPYDER---DSIADDMTIFRAQIEAGILDAMMPAHVIYP 211          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_PSYIN (Beta-hexosaminidase OS=Psychromonas ingrahamii (strain 37) GN=nagZ PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.209e-25
Identity = 75/179 (41.90%), Postives = 100/179 (55.87%), Query Frame = -1
Query:   52 VHELSAAIRAVRP----DLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 552
            + +L A ++ +R     +LL+AVD E         R R      P+  ++    D   A +LA    W+MA+E++A  +D SFAPVLDL+   S V+  RAF         LA A+I GM SAGM +TGKHFPGHG  EADSH A+P D RS  +I   D+ PF  L K+  L AVMP+
Sbjct:   39 IEQLKALVKDIRRYAGNELLIAVDHE----GGRVQRFRDDFTRLPSAGSLIEKNDMKTACELAFSSAWVMASELIACDIDFSFAPVLDLN-GISNVIQNRAFSSSITETVTLAEAYINGMKSAGMVSTGKHFPGHGSVEADSHTALPVDSRSELEIFTKDIKPFENLIKKGALDAVMPS 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_HAEDU (Beta-hexosaminidase OS=Haemophilus ducreyi GN=nagZ PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.427e-25
Identity = 81/200 (40.50%), Postives = 106/200 (53.00%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRA-VRPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQL-AEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P V GL  F   N + + Q+  L   IR  V   LL+ +DQE         R R      PA  A   LA +P    + A+Q GW+MA E+ A+ +DLSFAPVLDL ++  A+ G R+F     +   +A  FI GM   GMA TGKHFPGHG   ADSH+  P DER+   I   D+ PF       +L+A+MPA
Sbjct:   18 ILSHPLVAGLILF-SRNFVDKAQLTALIKEIRQKVTKPLLITIDQE----GGRVQRFREGFTRLPAMQAFGQLAKHPQEAIIWAKQAGWLMAAEMFALDIDLSFAPVLDLGHKCKAI-GDRSFGEKVTQILPIAEGFIDGMREIGMATTGKHFPGHGQVIADSHLETPFDERAKANIFNYDIQPFEYFIAKNKLSAIMPA 211          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_XANC5 (Beta-hexosaminidase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=nagZ PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 8.394e-25
Identity = 82/193 (42.49%), Postives = 103/193 (53.37%), Query Frame = -1
Query:   25 NMIIRPQVHELSAAIRAVRP-DLLLAVDQERRPGAALAPRVRPACPAMRALA--------DNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPF-ARLSKQLAAVMPAPRDFPTGRP 573
            N   R QV ELSAAIRA  P  +L+ VDQE         R R    A+  L         D  +A   A     +MA+EV A G+DLSFAPV+DL     A+ G RAF  DP+  A    A+++ ++ AGMAAT KHFPGHG    D+HV   +D R LE ++A DLVPF A +     AVM A   +P   P
Sbjct:   33 NFASRTQVAELSAAIRAAAPRPVLVCVDQE----GGRVQRFREGFSALAPLQSFGAQYAHDPESALAAARAHAQLMASEVRASGVDLSFAPVVDLGRGNRAI-GDRAFSDDPQIVATFTRAYVQALHGAGMAATLKHFPGHGTVLEDTHVDHASDPRPLEVLQAEDLVPFVAGIEAGADAVMMAHVVYPQVAP 220          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_XANAC (Beta-hexosaminidase OS=Xanthomonas axonopodis pv. citri GN=nagZ PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.394e-25
Identity = 82/193 (42.49%), Postives = 105/193 (54.40%), Query Frame = -1
Query:   25 NMIIRPQVHELSAAIRAVRP-DLLLAVDQERRPGAALAPRVRPACPAMRAL-------ADNPNAEQLAEQC-GWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPF-ARLSKQLAAVMPAPRDFPTGRP 573
            N   R QV ELSAAIRA  P  +L+ VDQE         R R    A+  L       A +P A   A +    +MA+EV A G+DLSFAPV+DL     A+ G RAF  +P+  A    A+++ ++ AGMAAT KHFPGHG    D+HV   +D R LE ++A DLVPF A +     AVM A   +P   P
Sbjct:   33 NFASRTQVAELSAAIRAAAPRPVLICVDQE----GGRVQRFREGFSALAPLQSFGAQYAQDPEAALAAARAHAQLMASEVRASGVDLSFAPVVDLGRGNRAI-GDRAFSDEPQIVATFTRAYVQALHGAGMAATLKHFPGHGTVLEDTHVDHASDPRPLEVLQAEDLVPFVAGIEAGADAVMMAHVVYPQVAP 220          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_XANOR (Beta-hexosaminidase OS=Xanthomonas oryzae pv. oryzae GN=nagZ PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.096e-24
Identity = 82/189 (43.39%), Postives = 103/189 (54.50%), Query Frame = -1
Query:   25 RPQVHELSAAIRAVRP-DLLLAVDQERRPGAALAPRVRPACPAMRAL-------ADNPNAEQLAEQC-GWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPF-ARLSKQLAAVMPAPRDFPTGRP 561
            R QV ELSAAIRA  P  +L+ VDQE         R R    A+  L       A  P A   A +    +MA+EV A G+DLSFAPV+DL     A+ G RAF  DP+  A    A+++ ++ AGMAAT KHFPGHG    D+HV   +D R LE ++A DLVPF A +     AVM A   +P   P
Sbjct:   37 RSQVAELSAAIRAAAPRPVLICVDQE----GGRVQRFREGFSALAPLQSFGAQYAQAPEAALAAARAHAQLMASEVRASGVDLSFAPVVDLGRGNRAI-GDRAFSDDPQIVATFTRAYVQALHGAGMAATLKHFPGHGTVLEDTHVDHASDPRPLEALQAEDLVPFVAGIEAGADAVMMAHVVYPQVAP 220          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_XANOM (Beta-hexosaminidase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=nagZ PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.432e-24
Identity = 82/189 (43.39%), Postives = 103/189 (54.50%), Query Frame = -1
Query:   25 RPQVHELSAAIRAVRP-DLLLAVDQERRPGAALAPRVRPACPAMRAL-------ADNPNAEQLAEQC-GWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPF-ARLSKQLAAVMPAPRDFPTGRP 561
            R QV ELSAAIRA  P  +L+ VDQE         R R    A+  L       A  P A   A +    +MA+EV A G+DLSFAPV+DL     A+ G RAF  DP+  A    A+++ ++ AGMAAT KHFPGHG    D+HV   +D R LE ++A DLVPF A +     AVM A   +P   P
Sbjct:   37 RSQVVELSAAIRAAAPRPVLICVDQE----GGRVQRFREGFSALAPLQSFGAQYAQAPEAALAAARAHAQLMASEVRASGVDLSFAPVVDLGRGNRAI-GDRAFSDDPQIVATFTRAYVQALHGAGMAATLKHFPGHGTVLEDTHVDHASDPRPLEALQAEDLVPFVAGIEAGADAVMMAHVVYPQVAP 220          
The following BLAST results are available for this feature:
BLAST of EY735394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
NAGZ_XYLF26.866e-2742.86Beta-hexosaminidase OS=Xylella fastidiosa (strain ... [more]
NAGZ_HAEPS8.968e-2742.35Beta-hexosaminidase OS=Haemophilus parasuis serova... [more]
NAGZ_XYLFM1.171e-2642.86Beta-hexosaminidase OS=Xylella fastidiosa (strain ... [more]
NAGZ_VIBFU1.295e-2541.29Beta-hexosaminidase OS=Vibrio furnissii GN=nagZ PE... [more]
NAGZ_PSYIN2.209e-2541.90Beta-hexosaminidase OS=Psychromonas ingrahamii (st... [more]
NAGZ_HAEDU6.427e-2540.50Beta-hexosaminidase OS=Haemophilus ducreyi GN=nagZ... [more]
NAGZ_XANC58.394e-2542.49Beta-hexosaminidase OS=Xanthomonas campestris pv. ... [more]
NAGZ_XANAC8.394e-2542.49Beta-hexosaminidase OS=Xanthomonas axonopodis pv. ... [more]
NAGZ_XANOR1.096e-2443.39Beta-hexosaminidase OS=Xanthomonas oryzae pv. oryz... [more]
NAGZ_XANOM1.432e-2443.39Beta-hexosaminidase OS=Xanthomonas oryzae pv. oryz... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-107-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735394 ID=EY735394; Name=EY735394; organism=Citrus sinensis; type=EST; length=1023bp
GGGGAACCGGGTCCGGAATTTCCCGGGTCGACCTGTGGGAAAATCACGTG
GGGCCGGCATGACGGCCGCCAACTGCTTGCTCAGGCGTGCAAAAGGCACC
AGGTCATTGGCGCGAATCTGTTCCAGGCTGCGCTCATCATTGGGAATCGC
GACGTGGGAATCGGCTTCGGCCCAGCCGTGGCCGGGGAAGTGTTTGCCGG
TAGCGGCCATGCCAGCGCTGTTCATCCCGCGAATAAAGGCACCGGCAAGC
ACCGCGGCGCGCTCGGGGTCGCCTTCGAATGCGCGCGTGCCCACGACTGC
GCTGCGCTGGTAATCGAGGTCCAGCACCGGCGCGAAGCTCAGGTCCAGGC
CGACCGCCAGCACTTCTGTCGCCATGATCCAACCGCACTGCTCGGCCAGT
TGCTCGGCATTCGGGTTGTCGGCCAAGGCGCGCATCGCCGGGCAGGCCGG
ACGAACCCTTGGCGCAAGCGCGGCACCCGGCCGCCTTTCCTGATCGACCG
CTAGCAACAGGTCCGGGCGCACGGCGCGAATCGCGGCGCTTAACTCATGC
ACCTGGGGGCGGATGATCATATTTGCCGGCAAAAATGATTTCAGGCCGCC
CACCCGGGGCTGGGGCAACAAAGTTGCGGTTTTTTAGCCGCCTAGCAGGT
CCCGGCGAACGACACTCCATCAAAAAAATCCTTGCCGGGCTTGGGGGCTA
AGAATTTCCTTTAAAAACCGTCCGACCTTCTGGAGCCCCTCCAGGGAGCT
TATCTCCTGGTGTTGTAATTTGGGAAAAGGTATCCACTTAAAAATGCACT
GGGATAGGGAGTTCTATGAAGCCACGCACTCCCCAGAGCCTGTATTACTT
TAAAAAAAAAATATTGGAGCGCCCATTTCGAAAGAATGATAAGGTTTTAT
CTGAGCGTATAAGTAAGCTGATATGTCCATAACCATCGTCAAGATGAGGT
TTGTACATCATTGACAATGTATTTTATAGTGTGAGCAGCATTGTTTATTA
TTACCAAATGCGCGGCGGGAAGC
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