EY735394

Overview
NameEY735394
Unique NameEY735394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_SHIB3 (Beta-hexosaminidase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nagZ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.001e-31
Identity = 86/199 (43.22%), Postives = 115/199 (57.79%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DPE+A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R   +IRA D+  F+ L ++  L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPAQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPEKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSTLIRENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_PROMH (Beta-hexosaminidase OS=Proteus mirabilis (strain HI4320) GN=nagZ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.001e-31
Identity = 88/199 (44.22%), Postives = 116/199 (58.29%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIR-AVRPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q++EL   IR A    L++AVDQE         R R      PA  +  AL +   A +LA++ GW+MA+E++A+ +D+SFAPVLDL +   A+ G R+F   PE A  +A +FI+GM SAGM +TGKHFPGHG   ADSH   P DERSL  IR  D+  F    ++  L A+MPA
Sbjct:   20 ILKHPLVGGLILFT-RNFHDAEQLNELVRQIRDASHERLVIAVDQE----GGRVQRFRDGFTRLPAAQSYAALNERYQASRLAQEAGWLMASEMIAMDIDISFAPVLDLGHDCIAI-GERSFHECPEIAMDMAESFIKGMRSAGMKSTGKHFPGHGAVRADSHKETPRDERSLNDIRQRDMAIFKDFIQRQLLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_NEIMB (Beta-hexosaminidase OS=Neisseria meningitidis serogroup B GN=nagZ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.001e-31
Identity = 86/204 (42.16%), Postives = 118/204 (57.84%), Query Frame = -1
Query:   37 LPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVR-PDLLLAVDQERRPGAALAPRVR--PACPAMRALAD------NPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ-LAAVMPAPRDFP 618
            L  P VGG+  F   N     Q+  L+A I+A+R P+L++AVD E   G  +   +      PAM  L +         AE  A Q G ++ATE+ A G+DLSF PVLDLD+    V+G R+F  +PE  A LA A  +G+   GM + GKHFPGHG+ E DSH+ +P D RSL ++   DL PF  +S++ +AAVMPA   +P
Sbjct:   28 LLDPAVGGIILFR-RNFQNIEQLKTLTAEIKALRTPELIIAVDHE---GGRVQRFIEGFTRLPAMSTLGEIWDKDGASAAETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHRNPEAVARLALALQKGLTKGGMKSCGKHFPGHGFVEGDSHLVLPEDWRSLSELETADLAPFRIMSREGMAAVMPAHVVYP 227          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_ECOSM (Beta-hexosaminidase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=nagZ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.001e-31
Identity = 86/199 (43.22%), Postives = 115/199 (57.79%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DPE+A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R   +IRA D+  F+ L ++  L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPAQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPEKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_ECOLU (Beta-hexosaminidase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=nagZ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.001e-31
Identity = 86/199 (43.22%), Postives = 115/199 (57.79%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DPE+A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R   +IRA D+  F+ L ++  L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPAQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPEKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_ECO7I (Beta-hexosaminidase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=nagZ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.001e-31
Identity = 86/199 (43.22%), Postives = 115/199 (57.79%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DPE+A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R   +IRA D+  F+ L ++  L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPAQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPEKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_ECO5E (Beta-hexosaminidase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=nagZ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.001e-31
Identity = 86/199 (43.22%), Postives = 115/199 (57.79%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DPE+A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R   +IRA D+  F+ L ++  L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPAQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPEKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSTLIRENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_ECO57 (Beta-hexosaminidase OS=Escherichia coli O157:H7 GN=nagZ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 6.001e-31
Identity = 86/199 (43.22%), Postives = 115/199 (57.79%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DPE+A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R   +IRA D+  F+ L ++  L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPAQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPEKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSTLIRENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_ECOSE (Beta-hexosaminidase OS=Escherichia coli (strain SE11) GN=nagZ PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.838e-31
Identity = 85/199 (42.71%), Postives = 116/199 (58.29%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL+      +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DP++A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R   +IRA D+  F+ L ++  L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPAQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_ECOLC (Beta-hexosaminidase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=nagZ PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.838e-31
Identity = 85/199 (42.71%), Postives = 116/199 (58.29%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL+      +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DP++A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R   +IRA D+  F+ L ++  L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPAQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPA 212          
The following BLAST results are available for this feature:
BLAST of EY735394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
NAGZ_SHIB36.001e-3143.22Beta-hexosaminidase OS=Shigella boydii serotype 18... [more]
NAGZ_PROMH6.001e-3144.22Beta-hexosaminidase OS=Proteus mirabilis (strain H... [more]
NAGZ_NEIMB6.001e-3142.16Beta-hexosaminidase OS=Neisseria meningitidis sero... [more]
NAGZ_ECOSM6.001e-3143.22Beta-hexosaminidase OS=Escherichia coli (strain SM... [more]
NAGZ_ECOLU6.001e-3143.22Beta-hexosaminidase OS=Escherichia coli O17:K52:H1... [more]
NAGZ_ECO7I6.001e-3143.22Beta-hexosaminidase OS=Escherichia coli O7:K1 (str... [more]
NAGZ_ECO5E6.001e-3143.22Beta-hexosaminidase OS=Escherichia coli O157:H7 (s... [more]
NAGZ_ECO576.001e-3143.22Beta-hexosaminidase OS=Escherichia coli O157:H7 GN... [more]
NAGZ_ECOSE7.838e-3142.71Beta-hexosaminidase OS=Escherichia coli (strain SE... [more]
NAGZ_ECOLC7.838e-3142.71Beta-hexosaminidase OS=Escherichia coli (strain AT... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-107-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735394 ID=EY735394; Name=EY735394; organism=Citrus sinensis; type=EST; length=1023bp
GGGGAACCGGGTCCGGAATTTCCCGGGTCGACCTGTGGGAAAATCACGTG
GGGCCGGCATGACGGCCGCCAACTGCTTGCTCAGGCGTGCAAAAGGCACC
AGGTCATTGGCGCGAATCTGTTCCAGGCTGCGCTCATCATTGGGAATCGC
GACGTGGGAATCGGCTTCGGCCCAGCCGTGGCCGGGGAAGTGTTTGCCGG
TAGCGGCCATGCCAGCGCTGTTCATCCCGCGAATAAAGGCACCGGCAAGC
ACCGCGGCGCGCTCGGGGTCGCCTTCGAATGCGCGCGTGCCCACGACTGC
GCTGCGCTGGTAATCGAGGTCCAGCACCGGCGCGAAGCTCAGGTCCAGGC
CGACCGCCAGCACTTCTGTCGCCATGATCCAACCGCACTGCTCGGCCAGT
TGCTCGGCATTCGGGTTGTCGGCCAAGGCGCGCATCGCCGGGCAGGCCGG
ACGAACCCTTGGCGCAAGCGCGGCACCCGGCCGCCTTTCCTGATCGACCG
CTAGCAACAGGTCCGGGCGCACGGCGCGAATCGCGGCGCTTAACTCATGC
ACCTGGGGGCGGATGATCATATTTGCCGGCAAAAATGATTTCAGGCCGCC
CACCCGGGGCTGGGGCAACAAAGTTGCGGTTTTTTAGCCGCCTAGCAGGT
CCCGGCGAACGACACTCCATCAAAAAAATCCTTGCCGGGCTTGGGGGCTA
AGAATTTCCTTTAAAAACCGTCCGACCTTCTGGAGCCCCTCCAGGGAGCT
TATCTCCTGGTGTTGTAATTTGGGAAAAGGTATCCACTTAAAAATGCACT
GGGATAGGGAGTTCTATGAAGCCACGCACTCCCCAGAGCCTGTATTACTT
TAAAAAAAAAATATTGGAGCGCCCATTTCGAAAGAATGATAAGGTTTTAT
CTGAGCGTATAAGTAAGCTGATATGTCCATAACCATCGTCAAGATGAGGT
TTGTACATCATTGACAATGTATTTTATAGTGTGAGCAGCATTGTTTATTA
TTACCAAATGCGCGGCGGGAAGC
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