EY735394

Overview
NameEY735394
Unique NameEY735394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_MANSM (Beta-hexosaminidase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=nagZ PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.336e-29
Identity = 90/202 (44.55%), Postives = 112/202 (55.45%), Query Frame = -1
Query:   52 ATLLPQPRVGGLKSFLPANMIIRPQVHELSAAIRA-VRPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAE-QLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 627
            A LL  P V GL  F   N   R Q+  L   IR  V+  LL+ VDQE         R R      PA  +  A+  +P  +   A++ GW+MA E+ A+ +DLSFAPVLDL ++  A+ G R+F  + E A  LA AFI GM+ AGMA TGKHFPGHG   ADSH+  P DER    I   D+ PF +L  Q  L AVMPA
Sbjct:   18 AELLAHPLVAGLILFT-RNFYDRSQIQALIKDIRRRVKKPLLITVDQE----GGRVQRFREGFTQLPAMQSFAAMISDPALQLTTAKEAGWLMAAEMTALDIDLSFAPVLDLGHECKAI-GDRSFCEEVEPAVRLASAFIDGMHQAGMATTGKHFPGHGHVLADSHLETPYDERPSAVIFERDIQPFQQLIAQNKLDAVMPA 213          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_HAES2 (Beta-hexosaminidase OS=Haemophilus somnus (strain 2336) GN=nagZ PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.581e-29
Identity = 87/200 (43.50%), Postives = 114/200 (57.00%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRA-VRPDLLLAVDQER------RPGAALAPRVRP-ACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            LL  P V GL  F   N     Q+  L  ++R  V+  LL+ VDQE       R G    P ++  AC     L+D    +++A + GW MA E+ A+ +DLSFAPVLDL +Q  A+ G R+F  + ++   LA  FI+GM   GM+ATGKHFPGHG   ADSH+  P D+R+ E I A D+ PF  L KQ  L AVMPA
Sbjct:   20 LLEHPLVAGLILF-SRNFYDIEQIRHLIRSVRQKVKKPLLITVDQEGGRVQRFRQGLTQLPAMQSFAC----LLSDPQEQQEMAWRAGWQMAAEMTALDIDLSFAPVLDLGHQCKAI-GDRSFHYEEKKLIELAEKFIQGMRQIGMSATGKHFPGHGHVLADSHLETPYDDRAKELIFAQDIRPFQSLIKQGLLDAVMPA 213          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_HAES1 (Beta-hexosaminidase OS=Haemophilus somnus (strain 129Pt) GN=nagZ PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.251e-28
Identity = 87/200 (43.50%), Postives = 114/200 (57.00%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRA-VRPDLLLAVDQER------RPGAALAPRVRP-ACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQ--LAAVMPA 621
            LL  P V GL  F   N     Q+  L  ++R  V+  LL+ VDQE       R G    P ++  AC     L+D    +++A + GW MA E+ A+ +DLSFAPVLDL +Q  A+ G R+F  + ++   LA  FI+GM   GM+ATGKHFPGHG   ADSH+  P D+R+ E I A D+ PF  L KQ  L AVMPA
Sbjct:   20 LLEHPLVAGLILF-SRNFYDIEQIRHLIRSVRQKVKKPLLITVDQEGGRVQRFRQGFTQLPAMQSFAC----LLSDPQEQQEMAWRAGWQMAAEMTALDIDLSFAPVLDLGHQCKAI-GDRSFHYEEKKLIELAEKFIQGMRQIGMSATGKHFPGHGHVLADSHLETPYDDRAKELIFAQDIRPFQSLIKQGLLDAVMPA 213          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_BORPE (Beta-hexosaminidase OS=Bordetella pertussis GN=nagZ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.634e-28
Identity = 89/214 (41.59%), Postives = 115/214 (53.74%), Query Frame = -1
Query:    4 LPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVRPD-LLLAVDQERRPGAALAPRVRPACPAMRALA-----DNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSK-QLAAVMPAPRDFP--TGRPGKFRTRF 618
            L  P VGG+  F   N   R Q+  L+ AI   R + LL+AVD E             A P M+ L      D   A +LA + G+++A E+ A G+DLSF PVLDLDY  S V+G RAF  D     +L+ A  +G+  AGMAA GKHFPGHG+  ADSH  IP D R L +I  +D  P+A L    + AVMPA   +P    +P  F  R+
Sbjct:   33 LRNPLVGGVILFA-RNFTDRRQLCALTRAIHKARKEPLLIAVDHEGGRVQRFRDDGFTALPPMQELGKLWDRDPLAAMRLATEAGYVLAAELRACGVDLSFTPVLDLDYGVSKVIGNRAFHHDARVVTMLSRALTQGLALAGMAACGKHFPGHGFVGADSHHEIPVDPRPLARILKDDAAPYAWLGDLVMPAVMPAHVIYPKVDAQPAGFSRRW 245          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_BORPA (Beta-hexosaminidase OS=Bordetella parapertussis GN=nagZ PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.634e-28
Identity = 89/214 (41.59%), Postives = 115/214 (53.74%), Query Frame = -1
Query:    4 LPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVRPD-LLLAVDQERRPGAALAPRVRPACPAMRALA-----DNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSK-QLAAVMPAPRDFP--TGRPGKFRTRF 618
            L  P VGG+  F   N   R Q+  L+ AI   R + LL+AVD E             A P M+ L      D   A +LA + G+++A E+ A G+DLSF PVLDLDY  S V+G RAF  D     +L+ A  +G+  AGMAA GKHFPGHG+  ADSH  IP D R L +I  +D  P+A L    + AVMPA   +P    +P  F  R+
Sbjct:   33 LRNPLVGGVILFA-RNFTDRRQLCALTRAIHKARKEPLLIAVDHEGGRVQRFRDDGFTALPPMQELGKLWDRDPLAAMRLATEAGYVLAAELRACGVDLSFTPVLDLDYGVSKVIGNRAFHHDARVVTMLSRALAQGLALAGMAACGKHFPGHGFVGADSHHEIPVDPRPLARILKDDAAPYAWLGDLVMPAVMPAHVIYPKVDAQPAGFSRRW 245          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_BORBR (Beta-hexosaminidase OS=Bordetella bronchiseptica GN=nagZ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.634e-28
Identity = 89/214 (41.59%), Postives = 115/214 (53.74%), Query Frame = -1
Query:    4 LPQPRVGGLKSFLPANMIIRPQVHELSAAIRAVRPD-LLLAVDQERRPGAALAPRVRPACPAMRALA-----DNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSK-QLAAVMPAPRDFP--TGRPGKFRTRF 618
            L  P VGG+  F   N   R Q+  L+ AI   R + LL+AVD E             A P M+ L      D   A +LA + G+++A E+ A G+DLSF PVLDLDY  S V+G RAF  D     +L+ A  +G+  AGMAA GKHFPGHG+  ADSH  IP D R L +I  +D  P+A L    + AVMPA   +P    +P  F  R+
Sbjct:   33 LRNPLVGGVILFA-RNFTDRRQLCALTRAIHKARKEPLLIAVDHEGGRVQRFRDDGFTALPPMQELGKLWDRDPLAAMRLATEAGYVLAAELRACGVDLSFTPVLDLDYGVSKVIGNRAFHHDARVVTMLSRALAQGLALAGMAACGKHFPGHGFVGADSHHEIPVDPRPLARILKDDAAPYAWLGDLVMPAVMPAHVIYPKVDAQPAGFSRRW 245          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_SALTY (Beta-hexosaminidase OS=Salmonella typhimurium GN=nagZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.134e-28
Identity = 84/199 (42.21%), Postives = 110/199 (55.28%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DP +A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R    IR  D+  F  L    +L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPEQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPAKALAMATRFIDGMHDAGMKTTGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_SALTI (Beta-hexosaminidase OS=Salmonella typhi GN=nagZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.134e-28
Identity = 84/199 (42.21%), Postives = 110/199 (55.28%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DP +A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R    IR  D+  F  L    +L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPEQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPAKALAMATRFIDGMHDAGMKTTGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRALISENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_SALSV (Beta-hexosaminidase OS=Salmonella schwarzengrund (strain CVM19633) GN=nagZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.134e-28
Identity = 84/199 (42.21%), Postives = 110/199 (55.28%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DP +A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R    IR  D+  F  L    +L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPEQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPAKALAMATRFIDGMHDAGMKTTGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPA 212          
BLAST of EY735394 vs. ExPASy Swiss-Prot
Match: NAGZ_SALPB (Beta-hexosaminidase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=nagZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.134e-28
Identity = 84/199 (42.21%), Postives = 110/199 (55.28%), Query Frame = -1
Query:   52 LLPQPRVGGLKSFLPANMIIRPQVHELSAAIRAV-RPDLLLAVDQERRPGAALAPRVR------PACPAMRALADNPNAEQLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARL--SKQLAAVMPA 621
            +L  P VGGL  F   N     Q+ EL   IRA  R  L++AVDQE         R R      PA  +  AL       +LA++ GW+MA+E++A+ +D+SFAPVLD+ +  SA +G R++  DP +A  +A  FI GM+ AGM  TGKHFPGHG   ADSH   P D R    IR  D+  F  L    +L A+MPA
Sbjct:   20 ILAHPLVGGLILFT-RNYHDPEQLRELVRQIRAASRNHLVVAVDQE----GGRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPAKALAMATRFIDGMHDAGMKTTGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPA 212          
The following BLAST results are available for this feature:
BLAST of EY735394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
NAGZ_MANSM7.336e-2944.55Beta-hexosaminidase OS=Mannheimia succiniciproduce... [more]
NAGZ_HAES29.581e-2943.50Beta-hexosaminidase OS=Haemophilus somnus (strain ... [more]
NAGZ_HAES11.251e-2843.50Beta-hexosaminidase OS=Haemophilus somnus (strain ... [more]
NAGZ_BORPE1.634e-2841.59Beta-hexosaminidase OS=Bordetella pertussis GN=nag... [more]
NAGZ_BORPA1.634e-2841.59Beta-hexosaminidase OS=Bordetella parapertussis GN... [more]
NAGZ_BORBR1.634e-2841.59Beta-hexosaminidase OS=Bordetella bronchiseptica G... [more]
NAGZ_SALTY2.134e-2842.21Beta-hexosaminidase OS=Salmonella typhimurium GN=n... [more]
NAGZ_SALTI2.134e-2842.21Beta-hexosaminidase OS=Salmonella typhi GN=nagZ PE... [more]
NAGZ_SALSV2.134e-2842.21Beta-hexosaminidase OS=Salmonella schwarzengrund (... [more]
NAGZ_SALPB2.134e-2842.21Beta-hexosaminidase OS=Salmonella paratyphi B (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-107-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735394 ID=EY735394; Name=EY735394; organism=Citrus sinensis; type=EST; length=1023bp
GGGGAACCGGGTCCGGAATTTCCCGGGTCGACCTGTGGGAAAATCACGTG
GGGCCGGCATGACGGCCGCCAACTGCTTGCTCAGGCGTGCAAAAGGCACC
AGGTCATTGGCGCGAATCTGTTCCAGGCTGCGCTCATCATTGGGAATCGC
GACGTGGGAATCGGCTTCGGCCCAGCCGTGGCCGGGGAAGTGTTTGCCGG
TAGCGGCCATGCCAGCGCTGTTCATCCCGCGAATAAAGGCACCGGCAAGC
ACCGCGGCGCGCTCGGGGTCGCCTTCGAATGCGCGCGTGCCCACGACTGC
GCTGCGCTGGTAATCGAGGTCCAGCACCGGCGCGAAGCTCAGGTCCAGGC
CGACCGCCAGCACTTCTGTCGCCATGATCCAACCGCACTGCTCGGCCAGT
TGCTCGGCATTCGGGTTGTCGGCCAAGGCGCGCATCGCCGGGCAGGCCGG
ACGAACCCTTGGCGCAAGCGCGGCACCCGGCCGCCTTTCCTGATCGACCG
CTAGCAACAGGTCCGGGCGCACGGCGCGAATCGCGGCGCTTAACTCATGC
ACCTGGGGGCGGATGATCATATTTGCCGGCAAAAATGATTTCAGGCCGCC
CACCCGGGGCTGGGGCAACAAAGTTGCGGTTTTTTAGCCGCCTAGCAGGT
CCCGGCGAACGACACTCCATCAAAAAAATCCTTGCCGGGCTTGGGGGCTA
AGAATTTCCTTTAAAAACCGTCCGACCTTCTGGAGCCCCTCCAGGGAGCT
TATCTCCTGGTGTTGTAATTTGGGAAAAGGTATCCACTTAAAAATGCACT
GGGATAGGGAGTTCTATGAAGCCACGCACTCCCCAGAGCCTGTATTACTT
TAAAAAAAAAATATTGGAGCGCCCATTTCGAAAGAATGATAAGGTTTTAT
CTGAGCGTATAAGTAAGCTGATATGTCCATAACCATCGTCAAGATGAGGT
TTGTACATCATTGACAATGTATTTTATAGTGTGAGCAGCATTGTTTATTA
TTACCAAATGCGCGGCGGGAAGC
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