EY735289

Overview
NameEY735289
Unique NameEY735289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y5610_BURCH (UPF0502 protein Bcen2424_5610 OS=Burkholderia cenocepacia (strain HI2424) GN=Bcen2424_5610 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.069e-11
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  307 MTTEHDTTSEEP--RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            M T  DT +      L   E RILG L+EKQ T P+TYPL+LNAL   CNQKT+R PVMN+S+ +V
Sbjct:    1 MNTTPDTPTPRALRELTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVSEDEV 66          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y5249_BURCA (UPF0502 protein Bcen_5249 OS=Burkholderia cenocepacia (strain AU 1054) GN=Bcen_5249 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.069e-11
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  307 MTTEHDTTSEEP--RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            M T  DT +      L   E RILG L+EKQ T P+TYPL+LNAL   CNQKT+R PVMN+S+ +V
Sbjct:    1 MNTTPDTPTPRALRELTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVSEDEV 66          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y076_PSEHT (UPF0502 protein PSHAa0076 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=PSHAa0076 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.069e-11
Identity = 30/52 (57.69%), Postives = 44/52 (84.62%), Query Frame = 1
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            +L++ + RI+GCL+EKQ+T+PE YPL+LNAL  ACNQK++R PV+NL+  +V
Sbjct:    2 QLSANQQRIIGCLLEKQSTTPEHYPLSLNALTNACNQKSNRAPVLNLTDSEV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y5360_BURP8 (UPF0502 protein Bphy_5360 OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=Bphy_5360 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.008e-11
Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 1
Query:  319 HDTTSEEPR-----LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            + T+ + PR     L   E R+LG L EKQ T P+TYPL+LN+L   CNQKTSR PVMN+S+ ++
Sbjct:    2 NSTSDDNPRPALRALTPLEARVLGVLFEKQHTVPDTYPLSLNSLAAGCNQKTSRSPVMNVSESEI 66          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y2426_SACD2 (UPF0502 protein Sde_2426 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=Sde_2426 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.008e-11
Identity = 30/52 (57.69%), Postives = 43/52 (82.69%), Query Frame = 1
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            +L+  E R++G LIEK+ T+P+ YP++LNAL  ACNQKT+REPV+NLS+ +V
Sbjct:    2 KLSLNETRVIGVLIEKEVTTPDQYPMSLNALTNACNQKTNREPVLNLSETEV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y194_GEOBB (UPF0502 protein Gbem_0194 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=Gbem_0194 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.008e-11
Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            L+  EIRILGCL+EK+  +PE YPLTLNAL  ACNQK++R+PVM++++  +
Sbjct:    5 LSELEIRILGCLMEKELATPEIYPLTLNALASACNQKSNRDPVMSVTEADL 55          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y5439_BURA4 (UPF0502 protein BamMC406_5439 OS=Burkholderia ambifaria (strain MC40-6) GN=BamMC406_5439 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.234e-11
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            L   E RILG L+EKQ T P+TYPL+LNAL   CNQKT+R PVMN+S+ +V
Sbjct:   16 LTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARSPVMNVSEDEV 66          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y4889_BURCM (UPF0502 protein Bamb_4889 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=Bamb_4889 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.234e-11
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            L   E RILG L+EKQ T P+TYPL+LNAL   CNQKT+R PVMN+S+ +V
Sbjct:   16 LTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARSPVMNVSEDEV 66          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y4455_RALEJ (UPF0502 protein Reut_B4455 OS=Ralstonia eutropha (strain JMP134) GN=Reut_B4455 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.234e-11
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:  307 MTTEHDTTSEEP--RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            M++  DT S +P   L   E R+LG L EKQ T P+TYPL+LNAL   CNQKT+R PVMN+++ +V
Sbjct:    1 MSSTPDTPSRQPIRALTPIEGRVLGVLKEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVTEAEV 66          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y2066_LEPCP (UPF0502 protein Lcho_2066 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=Lcho_2066 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.234e-11
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            L   E RI+G L+EKQ+T P+TYPL+LN+LV  CNQKT+R+PVM L+  QV
Sbjct:    5 LTPVEARIVGVLVEKQSTVPDTYPLSLNSLVAGCNQKTTRDPVMTLTDAQV 55          
The following BLAST results are available for this feature:
BLAST of EY735289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y5610_BURCH3.069e-1154.55UPF0502 protein Bcen2424_5610 OS=Burkholderia ceno... [more]
Y5249_BURCA3.069e-1154.55UPF0502 protein Bcen_5249 OS=Burkholderia cenocepa... [more]
Y076_PSEHT3.069e-1157.69UPF0502 protein PSHAa0076 OS=Pseudoalteromonas hal... [more]
Y5360_BURP84.008e-1150.77UPF0502 protein Bphy_5360 OS=Burkholderia phymatum... [more]
Y2426_SACD24.008e-1157.69UPF0502 protein Sde_2426 OS=Saccharophagus degrada... [more]
Y194_GEOBB4.008e-1158.82UPF0502 protein Gbem_0194 OS=Geobacter bemidjiensi... [more]
Y5439_BURA45.234e-1162.75UPF0502 protein BamMC406_5439 OS=Burkholderia ambi... [more]
Y4889_BURCM5.234e-1162.75UPF0502 protein Bamb_4889 OS=Burkholderia ambifari... [more]
Y4455_RALEJ5.234e-1153.03UPF0502 protein Reut_B4455 OS=Ralstonia eutropha (... [more]
Y2066_LEPCP5.234e-1160.78UPF0502 protein Lcho_2066 OS=Leptothrix cholodnii ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735289 ID=EY735289; Name=EY735289; organism=Citrus sinensis; type=EST; length=1018bp
AGCGATCTGCACCTGACGCACCAGCGGGAACATGTCCGGGTACAGGCGTG
CTTGCAGGAAGGCGTTCGGGTCGATGTTCTTGGCGGTGGCGTGGGCTTCG
GCCTTGTTCAGCACATCGCTCAGGGCGTTGAGCATTTGCTTGAAGACCGG
GAGGGAAGCGGCGTACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGG
CAGGGTTTGAAACAGCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCT
TGTCTTTTATTTTTTCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAA
AGCGCGATGACCACCGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAA
CAGCACGGAAATCCGCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCA
GCCCTGAAACCTACCCGTTGACCCTCAACGCGCTGGTGATCGCCTGCAAC
CAGAAAACCAGCCGCGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGG
CCAGAAACCTGCGGGCCCTGGAAGGTCGCGGGTTTACCCGGCTGGTGATG
GGGCAGCCGCGCCCGAACCGCTGGGAGCATCGGGTGGACAAGGGCCTTGG
GAACTGGGGGCCGGCCAGGGTGAATTTCCCAGGGGGGGCTGGTTGTTTCC
TGGCGGGGGGGCCGCAAACGGGCAACGAAACATATGGCCCGCCACGGGAC
CCCTGGCCCGAATTTTGAAAAAACCCCGAACCAAGGGGGGGATCCAACGG
GAAACCCCCAGAATTGCCCGTGGGGTCTGGGGTTTTTTTGGGGGGCCCCG
CTCCACACCGGGGACACCAGGGTATAAATGGGAAAAATGACCCCCCCTTG
GGGATGACCCCGGAGGGAAATTTTAAGAAAATTGTCTCACTGGCGAGCGA
AGGTGGAGAAAAAACCACGATGAGGGACCGGAGTGGGAGAAGGAGAAAAA
ATATGAGGGATCATCACCCACTGAGAGATCACTTGTTATTTAATAACTAA
AATAATGACTTGNATTGG
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