EY735289

Overview
NameEY735289
Unique NameEY735289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALPC (UPF0502 protein yceH OS=Salmonella paratyphi C (strain RKS4594) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALPB (UPF0502 protein yceH OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALPA (UPF0502 protein yceH OS=Salmonella paratyphi A GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALNS (UPF0502 protein yceH OS=Salmonella newport (strain SL254) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALHS (UPF0502 protein yceH OS=Salmonella heidelberg (strain SL476) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALEP (UPF0502 protein yceH OS=Salmonella enteritidis PT4 (strain P125109) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALDC (UPF0502 protein yceH OS=Salmonella dublin (strain CT_02021853) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALCH (UPF0502 protein yceH OS=Salmonella choleraesuis GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALA4 (UPF0502 protein yceH OS=Salmonella agona (strain SL483) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/54 (59.26%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNL++ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOUT (UPF0502 protein yceH OS=Escherichia coli (strain UTI89 / UPEC) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
The following BLAST results are available for this feature:
BLAST of EY735289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
YCEH_SALPC3.279e-1359.26UPF0502 protein yceH OS=Salmonella paratyphi C (st... [more]
YCEH_SALPB3.279e-1359.26UPF0502 protein yceH OS=Salmonella paratyphi B (st... [more]
YCEH_SALPA3.279e-1359.26UPF0502 protein yceH OS=Salmonella paratyphi A GN=... [more]
YCEH_SALNS3.279e-1359.26UPF0502 protein yceH OS=Salmonella newport (strain... [more]
YCEH_SALHS3.279e-1359.26UPF0502 protein yceH OS=Salmonella heidelberg (str... [more]
YCEH_SALEP3.279e-1359.26UPF0502 protein yceH OS=Salmonella enteritidis PT4... [more]
YCEH_SALDC3.279e-1359.26UPF0502 protein yceH OS=Salmonella dublin (strain ... [more]
YCEH_SALCH3.279e-1359.26UPF0502 protein yceH OS=Salmonella choleraesuis GN... [more]
YCEH_SALA43.279e-1359.26UPF0502 protein yceH OS=Salmonella agona (strain S... [more]
YCEH_ECOUT3.279e-1358.18UPF0502 protein yceH OS=Escherichia coli (strain U... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735289 ID=EY735289; Name=EY735289; organism=Citrus sinensis; type=EST; length=1018bp
AGCGATCTGCACCTGACGCACCAGCGGGAACATGTCCGGGTACAGGCGTG
CTTGCAGGAAGGCGTTCGGGTCGATGTTCTTGGCGGTGGCGTGGGCTTCG
GCCTTGTTCAGCACATCGCTCAGGGCGTTGAGCATTTGCTTGAAGACCGG
GAGGGAAGCGGCGTACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGG
CAGGGTTTGAAACAGCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCT
TGTCTTTTATTTTTTCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAA
AGCGCGATGACCACCGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAA
CAGCACGGAAATCCGCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCA
GCCCTGAAACCTACCCGTTGACCCTCAACGCGCTGGTGATCGCCTGCAAC
CAGAAAACCAGCCGCGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGG
CCAGAAACCTGCGGGCCCTGGAAGGTCGCGGGTTTACCCGGCTGGTGATG
GGGCAGCCGCGCCCGAACCGCTGGGAGCATCGGGTGGACAAGGGCCTTGG
GAACTGGGGGCCGGCCAGGGTGAATTTCCCAGGGGGGGCTGGTTGTTTCC
TGGCGGGGGGGCCGCAAACGGGCAACGAAACATATGGCCCGCCACGGGAC
CCCTGGCCCGAATTTTGAAAAAACCCCGAACCAAGGGGGGGATCCAACGG
GAAACCCCCAGAATTGCCCGTGGGGTCTGGGGTTTTTTTGGGGGGCCCCG
CTCCACACCGGGGACACCAGGGTATAAATGGGAAAAATGACCCCCCCTTG
GGGATGACCCCGGAGGGAAATTTTAAGAAAATTGTCTCACTGGCGAGCGA
AGGTGGAGAAAAAACCACGATGAGGGACCGGAGTGGGAGAAGGAGAAAAA
ATATGAGGGATCATCACCCACTGAGAGATCACTTGTTATTTAATAACTAA
AATAATGACTTGNATTGG
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