EY735289

Overview
NameEY735289
Unique NameEY735289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOSM (UPF0502 protein yceH OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOSE (UPF0502 protein yceH OS=Escherichia coli (strain SE11) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOLU (UPF0502 protein yceH OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOLI (UPF0502 protein yceH OS=Escherichia coli (strain K12) GN=yceH PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOLC (UPF0502 protein yceH OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOL6 (UPF0502 protein yceH OS=Escherichia coli O6 GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOL5 (UPF0502 protein yceH OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTAMEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOK1 (UPF0502 protein yceH OS=Escherichia coli O1:K1 / APEC GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECOHS (UPF0502 protein yceH OS=Escherichia coli O9:H4 (strain HS) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
[Close]
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECODH (UPF0502 protein yceH OS=Escherichia coli (strain K12 / DH10B) GN=yceH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.279e-13
Identity = 32/55 (58.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58
The following BLAST results are available for this feature:
BLAST of EY735289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
YCEH_ECOSM3.279e-1358.18UPF0502 protein yceH OS=Escherichia coli (strain S... [more]
YCEH_ECOSE3.279e-1358.18UPF0502 protein yceH OS=Escherichia coli (strain S... [more]
YCEH_ECOLU3.279e-1358.18UPF0502 protein yceH OS=Escherichia coli O17:K52:H... [more]
YCEH_ECOLI3.279e-1358.18UPF0502 protein yceH OS=Escherichia coli (strain K... [more]
YCEH_ECOLC3.279e-1358.18UPF0502 protein yceH OS=Escherichia coli (strain A... [more]
YCEH_ECOL63.279e-1358.18UPF0502 protein yceH OS=Escherichia coli O6 GN=yce... [more]
YCEH_ECOL53.279e-1358.18UPF0502 protein yceH OS=Escherichia coli O6:K15:H3... [more]
YCEH_ECOK13.279e-1358.18UPF0502 protein yceH OS=Escherichia coli O1:K1 / A... [more]
YCEH_ECOHS3.279e-1358.18UPF0502 protein yceH OS=Escherichia coli O9:H4 (st... [more]
YCEH_ECODH3.279e-1358.18UPF0502 protein yceH OS=Escherichia coli (strain K... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735289 ID=EY735289; Name=EY735289; organism=Citrus sinensis; type=EST; length=1018bp
AGCGATCTGCACCTGACGCACCAGCGGGAACATGTCCGGGTACAGGCGTG
CTTGCAGGAAGGCGTTCGGGTCGATGTTCTTGGCGGTGGCGTGGGCTTCG
GCCTTGTTCAGCACATCGCTCAGGGCGTTGAGCATTTGCTTGAAGACCGG
GAGGGAAGCGGCGTACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGG
CAGGGTTTGAAACAGCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCT
TGTCTTTTATTTTTTCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAA
AGCGCGATGACCACCGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAA
CAGCACGGAAATCCGCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCA
GCCCTGAAACCTACCCGTTGACCCTCAACGCGCTGGTGATCGCCTGCAAC
CAGAAAACCAGCCGCGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGG
CCAGAAACCTGCGGGCCCTGGAAGGTCGCGGGTTTACCCGGCTGGTGATG
GGGCAGCCGCGCCCGAACCGCTGGGAGCATCGGGTGGACAAGGGCCTTGG
GAACTGGGGGCCGGCCAGGGTGAATTTCCCAGGGGGGGCTGGTTGTTTCC
TGGCGGGGGGGCCGCAAACGGGCAACGAAACATATGGCCCGCCACGGGAC
CCCTGGCCCGAATTTTGAAAAAACCCCGAACCAAGGGGGGGATCCAACGG
GAAACCCCCAGAATTGCCCGTGGGGTCTGGGGTTTTTTTGGGGGGCCCCG
CTCCACACCGGGGACACCAGGGTATAAATGGGAAAAATGACCCCCCCTTG
GGGATGACCCCGGAGGGAAATTTTAAGAAAATTGTCTCACTGGCGAGCGA
AGGTGGAGAAAAAACCACGATGAGGGACCGGAGTGGGAGAAGGAGAAAAA
ATATGAGGGATCATCACCCACTGAGAGATCACTTGTTATTTAATAACTAA
AATAATGACTTGNATTGG
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