EY735289

Overview
NameEY735289
Unique NameEY735289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y097_STRMK (UPF0502 protein Smlt0097 OS=Stenotrophomonas maltophilia (strain K279a) GN=Smlt0097 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.282e-13
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  313 TEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            T+   T + P L++ + R+LGCL+EK+AT+P+TYPLT+NA   A NQKT+REPVMN+  G V
Sbjct:    2 TDSVQTPDVPLLDAVQARLLGCLVEKEATTPDTYPLTVNAAQSAANQKTAREPVMNIDAGSV 63          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y4380_XANC5 (UPF0502 protein XCV4380 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=XCV4380 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.593e-13
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  328 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT+REPV+NL  G V
Sbjct:    4 TSPPPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVV 60          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y4278_XANAC (UPF0502 protein XAC4278 OS=Xanthomonas axonopodis pv. citri GN=XAC4278 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.593e-13
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  328 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT+REPV+NL  G V
Sbjct:    4 TSPPPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVV 60          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y3616_XANOP (UPF0502 protein PXO_03616 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=PXO_03616 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.593e-13
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  328 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT+REPV+NL  G V
Sbjct:    4 TSPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVV 60          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y245_XANOR (UPF0502 protein XOO0245 OS=Xanthomonas oryzae pv. oryzae GN=XOO0245 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.593e-13
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  328 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT+REPV+NL  G V
Sbjct:    4 TSPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVV 60          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y224_XANOM (UPF0502 protein XOO0224 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=XOO0224 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.593e-13
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  328 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            TS  P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT+REPV+NL  G V
Sbjct:    4 TSPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLNLQTGVV 60          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y052_STRM5 (UPF0502 protein Smal_0052 OS=Stenotrophomonas maltophilia (strain R551-3) GN=Smal_0052 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.593e-13
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  313 TEHDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            T+   T + P L++ + R+LGCL+EK+AT+P+TYPLT+NA   A NQKT+REPVMN+  G V
Sbjct:    2 TDSTQTPDIPLLDAVQARLLGCLVEKEATTPDTYPLTVNAAQSAANQKTAREPVMNIDAGGV 63          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_ECO81 (UPF0502 protein yceH OS=Escherichia coli O81 (strain ED1a) GN=yceH PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.304e-13
Identity = 32/55 (58.18%), Postives = 45/55 (81.82%), Query Frame = 1
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L   E R++GCL+EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ +V ++
Sbjct:    4 QLTVMEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQ 58          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y2381_SHESW (UPF0502 protein Sputw3181_2381 OS=Shewanella sp. (strain W3-18-1) GN=Sputw3181_2381 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.304e-13
Identity = 32/47 (68.09%), Postives = 42/47 (89.36%), Query Frame = 1
Query:  358 EIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            E R++GCL+EK+ T+PE YPL+LNAL +ACNQKTSREPV++LS+ QV
Sbjct:    7 EARVIGCLLEKEITTPEQYPLSLNALTLACNQKTSREPVLDLSEAQV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y2280_ENTS8 (UPF0502 protein ESA_02280 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ESA_02280 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.304e-13
Identity = 31/52 (59.62%), Postives = 44/52 (84.62%), Query Frame = 1
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            + ++ E R++GC++EKQ T+PE YPL++N +V ACNQKT+REPVMNLS+ QV
Sbjct:    4 QFSALEARVIGCMLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSEAQV 55          
The following BLAST results are available for this feature:
BLAST of EY735289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y097_STRMK4.282e-1354.84UPF0502 protein Smlt0097 OS=Stenotrophomonas malto... [more]
Y4380_XANC55.593e-1359.65UPF0502 protein XCV4380 OS=Xanthomonas campestris ... [more]
Y4278_XANAC5.593e-1359.65UPF0502 protein XAC4278 OS=Xanthomonas axonopodis ... [more]
Y3616_XANOP5.593e-1359.65UPF0502 protein PXO_03616 OS=Xanthomonas oryzae pv... [more]
Y245_XANOR5.593e-1359.65UPF0502 protein XOO0245 OS=Xanthomonas oryzae pv. ... [more]
Y224_XANOM5.593e-1359.65UPF0502 protein XOO0224 OS=Xanthomonas oryzae pv. ... [more]
Y052_STRM55.593e-1354.84UPF0502 protein Smal_0052 OS=Stenotrophomonas malt... [more]
YCEH_ECO817.304e-1358.18UPF0502 protein yceH OS=Escherichia coli O81 (stra... [more]
Y2381_SHESW7.304e-1368.09UPF0502 protein Sputw3181_2381 OS=Shewanella sp. (... [more]
Y2280_ENTS87.304e-1359.62UPF0502 protein ESA_02280 OS=Enterobacter sakazaki... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735289 ID=EY735289; Name=EY735289; organism=Citrus sinensis; type=EST; length=1018bp
AGCGATCTGCACCTGACGCACCAGCGGGAACATGTCCGGGTACAGGCGTG
CTTGCAGGAAGGCGTTCGGGTCGATGTTCTTGGCGGTGGCGTGGGCTTCG
GCCTTGTTCAGCACATCGCTCAGGGCGTTGAGCATTTGCTTGAAGACCGG
GAGGGAAGCGGCGTACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGG
CAGGGTTTGAAACAGCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCT
TGTCTTTTATTTTTTCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAA
AGCGCGATGACCACCGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAA
CAGCACGGAAATCCGCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCA
GCCCTGAAACCTACCCGTTGACCCTCAACGCGCTGGTGATCGCCTGCAAC
CAGAAAACCAGCCGCGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGG
CCAGAAACCTGCGGGCCCTGGAAGGTCGCGGGTTTACCCGGCTGGTGATG
GGGCAGCCGCGCCCGAACCGCTGGGAGCATCGGGTGGACAAGGGCCTTGG
GAACTGGGGGCCGGCCAGGGTGAATTTCCCAGGGGGGGCTGGTTGTTTCC
TGGCGGGGGGGCCGCAAACGGGCAACGAAACATATGGCCCGCCACGGGAC
CCCTGGCCCGAATTTTGAAAAAACCCCGAACCAAGGGGGGGATCCAACGG
GAAACCCCCAGAATTGCCCGTGGGGTCTGGGGTTTTTTTGGGGGGCCCCG
CTCCACACCGGGGACACCAGGGTATAAATGGGAAAAATGACCCCCCCTTG
GGGATGACCCCGGAGGGAAATTTTAAGAAAATTGTCTCACTGGCGAGCGA
AGGTGGAGAAAAAACCACGATGAGGGACCGGAGTGGGAGAAGGAGAAAAA
ATATGAGGGATCATCACCCACTGAGAGATCACTTGTTATTTAATAACTAA
AATAATGACTTGNATTGG
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