EY735289

Overview
NameEY735289
Unique NameEY735289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y3498_VIBCM (UPF0502 protein VCM66_A0698 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=VCM66_A0698 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.125e-12
Identity = 31/52 (59.62%), Postives = 44/52 (84.62%), Query Frame = 1
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            +L+  E R++GCLIEK+ T+P+ YPLTLN+L  ACNQK++REPV+NLS+ +V
Sbjct:    4 QLSPLEARVIGCLIEKEVTTPDHYPLTLNSLTTACNQKSNREPVLNLSEAEV 55          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y262_GEOMG (UPF0502 protein Gmet_0262 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=Gmet_0262 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.125e-12
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 1
Query:  337 EPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            E  LNS EIR+LGCL+EK+  +PE YPLTLNAL  ACNQK++R+PVM L    V
Sbjct:    2 ETVLNSCEIRVLGCLVEKELATPEYYPLTLNALTAACNQKSNRDPVMALEDADV 55          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y2282_SHEDO (UPF0502 protein Sden_2282 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=Sden_2282 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.125e-12
Identity = 31/51 (60.78%), Postives = 43/51 (84.31%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            L   E R++GCL+EK+ T+P+ YPL+LNAL +ACNQK+SREPVM+L++ QV
Sbjct:    3 LTEFEARVIGCLLEKEVTTPDQYPLSLNALTLACNQKSSREPVMSLTESQV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y1995_CITK8 (UPF0502 protein CKO_01995 OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=CKO_01995 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.125e-12
Identity = 32/54 (59.26%), Postives = 45/54 (83.33%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL++N +V A NQKT+REPVMNLS+ +V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVNGVVTASNQKTNREPVMNLSEHEVQEQ 58          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y1184_GEOSF (UPF0502 protein Geob_1184 OS=Geobacter sp. (strain FRC-32) GN=Geob_1184 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.125e-12
Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            LN  E+R+LG LIEK+ T+PE YPL+LNAL  ACNQK++R+PV+NL +G+V
Sbjct:    5 LNEVEVRVLGSLIEKELTTPEYYPLSLNALTNACNQKSNRDPVLNLDEGEV 55          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SHIDS (UPF0502 protein yceH OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=yceH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.776e-12
Identity = 31/55 (56.36%), Postives = 44/55 (80.00%), Query Frame = 1
Query:  343 RLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            +L + E R++GCL+EKQ T+PE YPL+ N +V ACNQK +REPVMNLS+ +V ++
Sbjct:    4 QLTALEARVIGCLLEKQVTTPEQYPLSANGVVTACNQKMNREPVMNLSESEVQEQ 58          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: YCEH_SALAR (UPF0502 protein yceH OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=yceH PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.776e-12
Identity = 31/54 (57.41%), Postives = 45/54 (83.33%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQK 507
            L +TE R++GCL+EKQ T+PE YPL+++ +V ACNQKT+REPVMNL++  V ++
Sbjct:    5 LTATEARVIGCLLEKQVTTPEQYPLSVHGVVTACNQKTNREPVMNLTEQAVQEQ 58          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y1967_SHEAM (UPF0502 protein Sama_1967 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=Sama_1967 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.776e-12
Identity = 32/51 (62.75%), Postives = 44/51 (86.27%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            L++ E RI+GCL+EK+ T+P+ YPL+LNAL +ACNQK+SR PVM+LS+ QV
Sbjct:    3 LDAIEARIIGCLLEKEVTTPDQYPLSLNALTLACNQKSSRAPVMDLSETQV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y4303_CHRVO (UPF0502 protein CV_4303 OS=Chromobacterium violaceum GN=CV_4303 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 1
Query:  319 HDTTSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQ 489
            H    +  +L++ E+R+LG L+EKQA +P+ YPLTLNALV ACNQ TSREPVM LS+
Sbjct:    8 HGGCMDTHQLDAAEVRVLGALLEKQALTPDAYPLTLNALVGACNQLTSREPVMQLSE 64          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y2794_SERP5 (UPF0502 protein Spro_2794 OS=Serratia proteamaculans (strain 568) GN=Spro_2794 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12
Identity = 30/53 (56.60%), Postives = 44/53 (83.02%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQVGQ 504
            L++ E R++GCL+EKQ T+P+ YPL+LN + +ACNQKT+REPVM L++ +V Q
Sbjct:    5 LSAKEARVIGCLLEKQVTTPDQYPLSLNGIQLACNQKTNREPVMELTESEVQQ 57          
The following BLAST results are available for this feature:
BLAST of EY735289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y3498_VIBCM2.125e-1259.62UPF0502 protein VCM66_A0698 OS=Vibrio cholerae ser... [more]
Y262_GEOMG2.125e-1262.96UPF0502 protein Gmet_0262 OS=Geobacter metalliredu... [more]
Y2282_SHEDO2.125e-1260.78UPF0502 protein Sden_2282 OS=Shewanella denitrific... [more]
Y1995_CITK82.125e-1259.26UPF0502 protein CKO_01995 OS=Citrobacter koseri (s... [more]
Y1184_GEOSF2.125e-1262.75UPF0502 protein Geob_1184 OS=Geobacter sp. (strain... [more]
YCEH_SHIDS2.776e-1256.36UPF0502 protein yceH OS=Shigella dysenteriae serot... [more]
YCEH_SALAR2.776e-1257.41UPF0502 protein yceH OS=Salmonella arizonae (strai... [more]
Y1967_SHEAM2.776e-1262.75UPF0502 protein Sama_1967 OS=Shewanella amazonensi... [more]
Y4303_CHRVO3.625e-1259.65UPF0502 protein CV_4303 OS=Chromobacterium violace... [more]
Y2794_SERP53.625e-1256.60UPF0502 protein Spro_2794 OS=Serratia proteamacula... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735289 ID=EY735289; Name=EY735289; organism=Citrus sinensis; type=EST; length=1018bp
AGCGATCTGCACCTGACGCACCAGCGGGAACATGTCCGGGTACAGGCGTG
CTTGCAGGAAGGCGTTCGGGTCGATGTTCTTGGCGGTGGCGTGGGCTTCG
GCCTTGTTCAGCACATCGCTCAGGGCGTTGAGCATTTGCTTGAAGACCGG
GAGGGAAGCGGCGTACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGG
CAGGGTTTGAAACAGCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCT
TGTCTTTTATTTTTTCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAA
AGCGCGATGACCACCGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAA
CAGCACGGAAATCCGCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCA
GCCCTGAAACCTACCCGTTGACCCTCAACGCGCTGGTGATCGCCTGCAAC
CAGAAAACCAGCCGCGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGG
CCAGAAACCTGCGGGCCCTGGAAGGTCGCGGGTTTACCCGGCTGGTGATG
GGGCAGCCGCGCCCGAACCGCTGGGAGCATCGGGTGGACAAGGGCCTTGG
GAACTGGGGGCCGGCCAGGGTGAATTTCCCAGGGGGGGCTGGTTGTTTCC
TGGCGGGGGGGCCGCAAACGGGCAACGAAACATATGGCCCGCCACGGGAC
CCCTGGCCCGAATTTTGAAAAAACCCCGAACCAAGGGGGGGATCCAACGG
GAAACCCCCAGAATTGCCCGTGGGGTCTGGGGTTTTTTTGGGGGGCCCCG
CTCCACACCGGGGACACCAGGGTATAAATGGGAAAAATGACCCCCCCTTG
GGGATGACCCCGGAGGGAAATTTTAAGAAAATTGTCTCACTGGCGAGCGA
AGGTGGAGAAAAAACCACGATGAGGGACCGGAGTGGGAGAAGGAGAAAAA
ATATGAGGGATCATCACCCACTGAGAGATCACTTGTTATTTAATAACTAA
AATAATGACTTGNATTGG
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