EY735289

Overview
NameEY735289
Unique NameEY735289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1018
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y2520_SHEB2 (UPF0502 protein Sbal223_2520 OS=Shewanella baltica (strain OS223) GN=Sbal223_2520 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12
Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 1
Query:  358 EIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            E R++GCL+EK+ T+PE YPL+LN+L +ACNQKTSREPV+ LS+ QV
Sbjct:    7 EARVIGCLLEKEITTPEQYPLSLNSLTLACNQKTSREPVLELSETQV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y1802_SHEB9 (UPF0502 protein Sbal195_1802 OS=Shewanella baltica (strain OS195) GN=Sbal195_1802 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12
Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 1
Query:  358 EIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            E R++GCL+EK+ T+PE YPL+LN+L +ACNQKTSREPV+ LS+ QV
Sbjct:    7 EARVIGCLLEKEITTPEQYPLSLNSLTLACNQKTSREPVLELSETQV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y1765_SHEB5 (UPF0502 protein Sbal_1765 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=Sbal_1765 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12
Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 1
Query:  358 EIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            E R++GCL+EK+ T+PE YPL+LN+L +ACNQKTSREPV+ LS+ QV
Sbjct:    7 EARVIGCLLEKEITTPEQYPLSLNSLTLACNQKTSREPVLELSETQV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y1758_SHEB8 (UPF0502 protein Shew185_1758 OS=Shewanella baltica (strain OS185) GN=Shew185_1758 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12
Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 1
Query:  358 EIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            E R++GCL+EK+ T+PE YPL+LN+L +ACNQKTSREPV+ LS+ QV
Sbjct:    7 EARVIGCLLEKEITTPEQYPLSLNSLTLACNQKTSREPVLELSETQV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y1629_SHESR (UPF0502 protein Shewmr7_1629 OS=Shewanella sp. (strain MR-7) GN=Shewmr7_1629 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.625e-12
Identity = 30/47 (63.83%), Postives = 42/47 (89.36%), Query Frame = 1
Query:  358 EIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            E R++GCL+EK+ T+PE YPL+LNAL +ACNQKTSR+PV++LS+ +V
Sbjct:    7 EARVIGCLLEKEVTTPEQYPLSLNALTLACNQKTSRDPVLDLSEAKV 53          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y233_GEOSL (UPF0502 protein GSU0233 OS=Geobacter sulfurreducens GN=GSU0233 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.734e-12
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 1
Query:  346 LNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            LN  E+R+LGCLIEK+  +PE YPLTLN+L  ACNQK++R+PVM L + +V
Sbjct:    5 LNDVEVRVLGCLIEKELATPEYYPLTLNSLTTACNQKSNRDPVMALEESEV 55          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y1529_CELJU (UPF0502 protein CJA_1529 OS=Cellvibrio japonicus (strain Ueda107) GN=CJA_1529 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.734e-12
Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 1
Query:  337 EPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            +P L   E R+LG L+EKQ T+P+ YPLTLN+L++ACNQKTSREPV +   G+V
Sbjct:    6 DPLLTPIEARVLGALMEKQLTTPDAYPLTLNSLLLACNQKTSREPVSHYESGEV 59          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y4348_XANCB (UPF0502 protein xcc-b100_4348 OS=Xanthomonas campestris pv. campestris (strain B100) GN=xcc-b100_4348 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.183e-12
Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1
Query:  328 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            T   P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT+REPV+ L  G+V
Sbjct:    4 TLPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLTLQTGKV 60          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y4228_XANC8 (UPF0502 protein XC_4228 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=XC_4228 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.183e-12
Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1
Query:  328 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            T   P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT+REPV+ L  G+V
Sbjct:    4 TLPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLTLQTGKV 60          
BLAST of EY735289 vs. ExPASy Swiss-Prot
Match: Y4136_XANCP (UPF0502 protein XCC4136 OS=Xanthomonas campestris pv. campestris GN=XCC4136 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.183e-12
Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1
Query:  328 TSEEPRLNSTEIRILGCLIEKQATSPETYPLTLNALVIACNQKTSREPVMNLSQGQV 498
            T   P L++ + R+LGCLIEK+AT+P+ YPLT+NA  +A NQKT+REPV+ L  G+V
Sbjct:    4 TLPTPVLDTAQARVLGCLIEKEATTPDAYPLTVNAAQVAANQKTAREPVLTLQTGKV 60          
The following BLAST results are available for this feature:
BLAST of EY735289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y2520_SHEB23.625e-1265.96UPF0502 protein Sbal223_2520 OS=Shewanella baltica... [more]
Y1802_SHEB93.625e-1265.96UPF0502 protein Sbal195_1802 OS=Shewanella baltica... [more]
Y1765_SHEB53.625e-1265.96UPF0502 protein Sbal_1765 OS=Shewanella baltica (s... [more]
Y1758_SHEB83.625e-1265.96UPF0502 protein Shew185_1758 OS=Shewanella baltica... [more]
Y1629_SHESR3.625e-1263.83UPF0502 protein Shewmr7_1629 OS=Shewanella sp. (st... [more]
Y233_GEOSL4.734e-1260.78UPF0502 protein GSU0233 OS=Geobacter sulfurreducen... [more]
Y1529_CELJU4.734e-1259.26UPF0502 protein CJA_1529 OS=Cellvibrio japonicus (... [more]
Y4348_XANCB6.183e-1256.14UPF0502 protein xcc-b100_4348 OS=Xanthomonas campe... [more]
Y4228_XANC86.183e-1256.14UPF0502 protein XC_4228 OS=Xanthomonas campestris ... [more]
Y4136_XANCP6.183e-1256.14UPF0502 protein XCC4136 OS=Xanthomonas campestris ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735289 ID=EY735289; Name=EY735289; organism=Citrus sinensis; type=EST; length=1018bp
AGCGATCTGCACCTGACGCACCAGCGGGAACATGTCCGGGTACAGGCGTG
CTTGCAGGAAGGCGTTCGGGTCGATGTTCTTGGCGGTGGCGTGGGCTTCG
GCCTTGTTCAGCACATCGCTCAGGGCGTTGAGCATTTGCTTGAAGACCGG
GAGGGAAGCGGCGTACAGGGAAATAGTCATGACAGTCTCGACAGTTGTGG
CAGGGTTTGAAACAGCGGCGATTATAGACATGCCGGCCGCCAGCGCCGCT
TGTCTTTTATTTTTTCAGGATTAGGCTAGTGGGCTCACTGCATTAGGGAA
AGCGCGATGACCACCGAGCACGACACCACTTCCGAAGAGCCGCGCCTGAA
CAGCACGGAAATCCGCATCCTGGGCTGCCTGATCGAAAAGCAGGCTACCA
GCCCTGAAACCTACCCGTTGACCCTCAACGCGCTGGTGATCGCCTGCAAC
CAGAAAACCAGCCGCGAACCGGTGATGAACCTCAGCCAGGGCCAGGTCGG
CCAGAAACCTGCGGGCCCTGGAAGGTCGCGGGTTTACCCGGCTGGTGATG
GGGCAGCCGCGCCCGAACCGCTGGGAGCATCGGGTGGACAAGGGCCTTGG
GAACTGGGGGCCGGCCAGGGTGAATTTCCCAGGGGGGGCTGGTTGTTTCC
TGGCGGGGGGGCCGCAAACGGGCAACGAAACATATGGCCCGCCACGGGAC
CCCTGGCCCGAATTTTGAAAAAACCCCGAACCAAGGGGGGGATCCAACGG
GAAACCCCCAGAATTGCCCGTGGGGTCTGGGGTTTTTTTGGGGGGCCCCG
CTCCACACCGGGGACACCAGGGTATAAATGGGAAAAATGACCCCCCCTTG
GGGATGACCCCGGAGGGAAATTTTAAGAAAATTGTCTCACTGGCGAGCGA
AGGTGGAGAAAAAACCACGATGAGGGACCGGAGTGGGAGAAGGAGAAAAA
ATATGAGGGATCATCACCCACTGAGAGATCACTTGTTATTTAATAACTAA
AATAATGACTTGNATTGG
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