EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP7 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 7424) GN=hemA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.307e-31
Identity = 79/214 (36.92%), Postives = 129/214 (60.28%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            R+ +IGAGKM +L+++HL++KG +K+ +VNRS  R   +       ++   PL EM++  + +D+VFTST +  P+  + +++ +  V  ++    + +DISVPRNV + V  +E  + YNVDDLK VVAAN+E R R A EA+ ++ EE + F  W  SL+TVP        C R++   +R      ALS++G    +K++E + A+T  +V
Sbjct:  184 RVTIIGAGKMSRLLVQHLLSKGVSKIAIVNRSLRRAQELAGLFPEAQLQLHPLEEMINAVSVSDIVFTSTGATEPILNRSNLESIIAVNQSL----MLVDISVPRNVDADVQQLEQIQSYNVDDLKAVVAANQESRRRLAQEAEGLLEEEVESFELWWRSLDTVP-----TISCLRDKVETIREQELEKALSRLGTEFAEKHQEVIEALTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_NOSP7 (Glutamyl-tRNA reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.126e-30
Identity = 81/217 (37.33%), Postives = 131/217 (60.37%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            A  R++++GAGKM +L+++HL++KG  ++ +VNRS +R   + +      I   PLSEM+S  AD+D+VFTST++  P+  +  ++ +  V+ ++    +  DISVPRNV + V ++E  + +NVDDLK VVA N E R + A EA+ ++ EE + F  W  SLETV         C RN+   +R      ALS++G    +K++E + A+T  +V
Sbjct:  181 AACRVVILGAGKMSRLLVQHLISKGAVEISIVNRSRDRAQELAKLFPQQPIKIHPLSEMMSVIADSDLVFTSTSATEPILDRVKLEMVLEVQRSL----MLFDISVPRNVHADVNELENVQAFNVDDLKAVVAQNYESRRKIAQEAEKLLEEEVEAFDIWWRSLETV-----TTISCLRNKVETIREQELEKALSRLGSEFAEKHQEVIEALTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ACAM1 (Glutamyl-tRNA reductase OS=Acaryochloris marina (strain MBIC 11017) GN=hemA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.185e-30
Identity = 82/214 (38.32%), Postives = 129/214 (60.28%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            R+ +IGAGKM +L++KHL++KG  ++ ++NRS +R   + ++  G ++    L++M +   ++D++FTSTAS  PL  +D    L P+        +F DISVPRNV S V ++     +NVDDLK VVA N+E R + A+EA++++ EE   F  W  SLETVP    I SL  R +   +R      ALS++G    +K++E + A+T  +V
Sbjct:  184 RVAIIGAGKMSRLLVKHLLSKGANQIAILNRSLKRAEQLADQFQGADLKLHTLADMQAVLTESDLIFTSTASTEPLLDRD---ILEPIVCDRQSCMIF-DISVPRNVHSNVNELSQVHAFNVDDLKAVVAQNQESRRQMALEAESLLEEEVASFDVWWRSLETVP---TISSL--RTKVESIREQELEKALSRLGTEFAEKHQEVIEALTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP4 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.055e-29
Identity = 81/217 (37.33%), Postives = 130/217 (59.91%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            A  R+ V+GAGKM +LV++HL+AKG  ++ ++NRS ER   +  + +   +    L+E+ +     D++FT T++  PL  +  ++ +  V  ++    + IDI+VPRNV + V ++E  +V+NVDDLK VVA N+E R   AMEA+A++ EE   F  W  SLETVP    I SL  R++   +R      ALS++G    +K++E + A+T  +V
Sbjct:  181 ADCRVAVLGAGKMSRLVVQHLLAKGANQIAILNRSTERARELANQFSEASLQIHSLAELFNVITRYDLIFTGTSATEPLLDRSKLEPVLEVNQSL----MIIDIAVPRNVHANVNELEQVQVFNVDDLKAVVAQNQESRRAMAMEAEALLEEELTAFDVWWRSLETVP---TISSL--RDKIETIREQELEKALSRLGSEFAEKHQEVIEALTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_MICAN (Glutamyl-tRNA reductase OS=Microcystis aeruginosa (strain NIES-843) GN=hemA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.236e-29
Identity = 77/217 (35.48%), Postives = 129/217 (59.45%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            ++ ++ +IGAGKM +L++ HL+AKG  ++ ++NRS+ R   +  E   + +    L EM++  A +D+VFTST +  P+  K  + ++     ++    + IDISVPRNV + V ++   + +NVDDLK VVAAN+E R + A EA+A++ +E + F  W  SL+TVP        C R++   +R      ALS++G    +K++E + AMT  +V
Sbjct:  181 SSKKIAIIGAGKMSRLLVTHLLAKGSQQIAIINRSQRRAQELAREFPHLPLQLYGLEEMMTTVAASDIVFTSTGATEPILTKTLLTEVTITANSL----MLIDISVPRNVHTDVKELAQVQAFNVDDLKAVVAANQESRRQMAREAEALLEQEVEAFELWWRSLDTVP-----TISCLRSKIEDIREQELEKALSRLGTEFAEKHQEVIEAMTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_TRIEI (Glutamyl-tRNA reductase OS=Trichodesmium erythraeum (strain IMS101) GN=hemA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 80/216 (37.04%), Postives = 127/216 (58.80%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR--LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            ++ ++GAGKM KL+++HL+AKG  K+ ++NRS  R   +        I    + EM+    ++D+VFTSTA+       + + D   +E  +  L+  + +DISVPRN+G+ V+++   R +NVDDLK VVA N+E R + AMEA+ ++ EE + F  W  SLETVP    I SL  R +   +R      ALS++G    +K++E + A+T  +V
Sbjct:  184 QVAIVGAGKMSKLLVQHLLAKGANKISIINRSVGRAQDLANSFKDANIKVYSMLEMVQVIGESDLVFTSTAAT------ELILDKAKLETILDPLKPLMLVDISVPRNIGNDVSELPNVRCFNVDDLKAVVAQNRESRRQMAMEAEVLLEEEVEAFDVWWKSLETVP---TINSL--RQKIETIREQELEKALSRLGSEFAEKHQEVIEALTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNY3 (Glutamyl-tRNA reductase OS=Synechocystis sp. (strain PCC 6803) GN=hemA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 80/217 (36.87%), Postives = 128/217 (58.99%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            ++ + ++IGAGKM  L++KHL+AKG T + +VNRS+ R   +  +    ++   PL++M +  A  D+VFTST +  P+   +++        ++    + +DISVPRNV + V  +E  R +NVDDLKEVVA N+  R + A +A+A++ EE   F  W  SLETVP    I SL  R++   +R      ALS++G    +K++E + A+T  +V
Sbjct:  180 SSQKTVIIGAGKMACLLVKHLLAKGATDITIVNRSQRRSQDLANQFPQAQLTLCPLTDMFTAIAAGDIVFTSTGATEPILNCENLTGCVINRKSL----MLVDISVPRNVAADVHAMEQVRAFNVDDLKEVVAQNQASRRQMARQAEALLEEEIAAFDLWWRSLETVP---TISSL--RSKVEDIREQELEKALSRLGSEFAEKHQEVIEALTRGIV 387          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_THEEB (Glutamyl-tRNA reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.524e-28
Identity = 84/220 (38.18%), Postives = 130/220 (59.09%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL-FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRI----NALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            R+ V+GAGKM +LV++HL+A+G  ++ ++NRS ER   + ++   V      ++++L   A  D+VFTSTA+  PL  +D++  +      VG   L  IDISVPRNV + V ++ T +++NVDDL+ VVA N+E R + A EA+ I+ EE + F AW  +LETVP    I SL  R +   +R      ALS++G     K+ +G+   +   I N +L
Sbjct:  184 RIAVVGAGKMSRLVVQHLIARGVKEIRIINRSLERAQELAQQFPEVRFELFTMTDLLPIVAAMDLVFTSTAATEPLLDRDNLGAV-----LVGDRSLAIIDISVPRNVHANVTELGTVQLFNVDDLQAVVAQNQEARRQLAQEAEGILEEELETFLAWWHALETVPI---IRSL--RQKMEAIRTQELEKALSRLGSEFADKH-QGVIEAMTRTIINKIL 392          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP8 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 8801) GN=hemA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.990e-28
Identity = 84/217 (38.71%), Postives = 121/217 (55.76%), Query Frame = 1
Query:   16 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGL-AMTLPVV 651
            A  R+ +IGAGKM +L+++HL++KG T + +VNRS  R   +  +     +  + L EM+   A + +VFTSTA+  P+    H ++L         L LF DISVPRNV S V  +E    YNVDDLK VVA N E R + A EA+ ++ EE + F  W  SLETVP        C R +   +R      ALS++G    +K++E + A+T  +V
Sbjct:  181 ANRRISIIGAGKMARLLVQHLLSKGATDITIVNRSHHRAQELAAQFPQASLNLQLLPEMMQVVASSHIVFTSTAATEPIL---HRENLTAALDPNHALMLF-DISVPRNVASDVHGMEGIESYNVDDLKAVVAQNYESRRQMAQEAEGLLEEEVEAFDLWWRSLETVP-----TISCLRTKVETIREQELEKALSRLGTEFAEKHQEVIEALTRGIV 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNP2 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=hemA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.789e-28
Identity = 82/219 (37.44%), Postives = 128/219 (58.45%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVR----INALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            ++ +IGAGKM +L+++HLV+KG   + +VNRSE     + ++   V++  + L EML+    AD+VFTST +  P+  +  +++L           + IDISVP NV + V ++   R+YNVD LKEVVA N+  R + A EA+A++ EE + +  W  SLETVP    I SL  R++   +R      ALS++G    +K++E +  TL   I N +L
Sbjct:  184 KIAIIGAGKMSRLLVQHLVSKGAEDITIVNRSERGARDLAKKFPDVDLQLELLPEMLNVVEQADIVFTSTGATEPILDRAKLENLDLHTL------ILIDISVPLNVAADVEEIAGVRLYNVDALKEVVAQNQASRRKMAEEAEALLEEEVENYIQWWQSLETVP---TISSL--RSKVESIREQELEKALSRLGAEFEEKHQE-VIETLTRGIVNKIL 390          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_CYAP77.307e-3136.92Glutamyl-tRNA reductase OS=Cyanothece sp. (strain ... [more]
HEM1_NOSP72.126e-3037.33Glutamyl-tRNA reductase OS=Nostoc punctiforme (str... [more]
HEM1_ACAM16.185e-3038.32Glutamyl-tRNA reductase OS=Acaryochloris marina (s... [more]
HEM1_CYAP41.055e-2937.33Glutamyl-tRNA reductase OS=Cyanothece sp. (strain ... [more]
HEM1_MICAN5.236e-2935.48Glutamyl-tRNA reductase OS=Microcystis aeruginosa ... [more]
HEM1_TRIEI8.932e-2937.04Glutamyl-tRNA reductase OS=Trichodesmium erythraeu... [more]
HEM1_SYNY38.932e-2936.87Glutamyl-tRNA reductase OS=Synechocystis sp. (stra... [more]
HEM1_THEEB1.524e-2838.18Glutamyl-tRNA reductase OS=Thermosynechococcus elo... [more]
HEM1_CYAP81.990e-2838.71Glutamyl-tRNA reductase OS=Cyanothece sp. (strain ... [more]
HEM1_SYNP25.789e-2837.44Glutamyl-tRNA reductase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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