EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BACAC (Glutamyl-tRNA reductase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=hemA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.605e-20
Identity = 57/165 (34.55%), Postives = 98/165 (59.39%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L++GAGKMG+L +++L   G  K+ V+NR+  +   + E+  G     KPLSE+     +AD++ +ST +   +  K+    +  VE    G  LF +DI+VPR++   + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE   F  W  +L  VP
Sbjct:  185 VLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEIMAEKYMGHA---KPLSELQCALLEADILISSTGASDYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEEIVLFKTWLSTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BACAA (Glutamyl-tRNA reductase OS=Bacillus anthracis (strain A0248) GN=hemA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.605e-20
Identity = 57/165 (34.55%), Postives = 98/165 (59.39%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L++GAGKMG+L +++L   G  K+ V+NR+  +   + E+  G     KPLSE+     +AD++ +ST +   +  K+    +  VE    G  LF +DI+VPR++   + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE   F  W  +L  VP
Sbjct:  185 VLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEIMAEKYMGHA---KPLSELQCALLEADILISSTGASDYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEEIVLFKTWLSTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHEWM (Glutamyl-tRNA reductase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=hemA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.402e-20
Identity = 71/223 (31.84%), Postives = 117/223 (52.47%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LE--IESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            SS ++ ++L+IGAG+  +LV +HL   G   MVV NR+  R   +C+E     I  + + + L     AD+V +STAS  P+  K  V+    ++       L +DI+VPR++ + VAD++ A +Y VDDL+ ++  N   R   A +A+ I   ES  F  W  SLE+V    E   +S+  +++  +  IN L++ G+       E L + L   + N L+
Sbjct:  174 SSISSTKVLLIGAGETIELVARHLKDNGVDSMVVANRTLSRAEGMCDEFGATAITLEQIPDFLP---KADIVISSTASPLPILGKGMVEKA--LKQRRHQPMLLVDIAVPRDIEAEVADLDDAFLYTVDDLQSIIEQNMASRREAAEQAEVIAENESHLFMEWVRSLESVDSIREYRTQSMAIKDELVERAINKLAQGGD------SEQLLLELANKLTNKLI 385          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GEOMG (Glutamyl-tRNA reductase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=hemA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.402e-20
Identity = 58/164 (35.37%), Postives = 92/164 (56.10%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +++IGAG+M +L  KH +  G   ++V NR+ ER   + EE  G  + +  L + L     AD+V +ST +   +     V+++  +         FIDI+VPR++   V DVE   +Y++DDL+ VVA+N + R  +A +A+AII EE  QF  W  +LE  P
Sbjct:  185 VMLIGAGEMCELAAKHFINNGVRGVMVTNRTYERAVKLAEEFEGKPVSFDDLFDQLH---KADIVLSSTGATQFIIKPKDVEEV--IRRRKLKPMFFIDIAVPRDIDPKVNDVENVYLYDMDDLQGVVASNLQQRAEEAKKAEAIIDEEIGQFHKWLSNLEVTP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BACHD (Glutamyl-tRNA reductase OS=Bacillus halodurans GN=hemA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.402e-20
Identity = 51/165 (30.91%), Postives = 95/165 (57.58%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            ++L++GAGKMG+L  KHL + G  ++ V+NR+ E+ A + +   GV+   +P +E+     +AD++ +ST +   +   D V     ++   G     +DI+VPR++   +A  +   +Y++DDL+ +V  N E+R  +A + + +I EE  +F  W ++L  VP
Sbjct:  184 QVLILGAGKMGELTAKHLHSNGAEQVTVINRTREKAAELAKRFLGVD---RPYNELTEAIVEADILISSTGATGYVVTSDMVSHA--LKKRKGRPLFMVDIAVPRDLDPALASHDDVYLYDIDDLQNIVQTNLEERRTEAEKIELLIEEELVEFKQWLNTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GEOSM (Glutamyl-tRNA reductase OS=Geobacter sp. (strain M21) GN=hemA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.443e-20
Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPV-EAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L+IGAG+M +L  KH +  G   ++V NR+ ER   + EE +   + ++ L E L     AD++ +ST   AP F+  H +D+  V          FIDI+VPR++   V DVE   +Y VDDL  VVA N E R  +A +A+AI+ +E  QF  W  SLE  P
Sbjct:  185 VLLIGAGEMCELAAKHFINVGVRGVMVTNRTYERAEKLAEEFDAKPVHFEALMETLP---KADIILSSTG--APHFII-HEKDMEDVLRRRKHKPMFFIDIAVPRDIDPKVNDVENCYLYTVDDLNGVVATNLEQRKVEAAKAEAIVEQEIGQFFKWLSSLEVTP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_DESVV (Glutamyl-tRNA reductase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=hemA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.443e-20
Identity = 57/165 (34.55%), Postives = 93/165 (56.36%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            + ++IGAG+M +L   HL+  G +K+ V NR+ ER   +  + NG  I ++ L E L   ADAD++ +ST +   +     ++D+  +         FIDI+VPR++   V +++   +Y++DDLKEVV  N   R  +A +A  I+ EE+ +F  W  SLE  P
Sbjct:  184 KAMLIGAGEMAELAATHLLHAGISKIYVANRTFERGRELARQFNGEAIHFEDLFERL---ADADIIISSTGAHEAIIRARDIKDV--LRRRKHRPMFFIDIAVPRDIDPDVNNLDNVYLYDIDDLKEVVEENLAQRREEASKALTIVEEETGKFGQWLRSLELQP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_DESVH (Glutamyl-tRNA reductase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=hemA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.443e-20
Identity = 57/165 (34.55%), Postives = 93/165 (56.36%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            + ++IGAG+M +L   HL+  G +K+ V NR+ ER   +  + NG  I ++ L E L   ADAD++ +ST +   +     ++D+  +         FIDI+VPR++   V +++   +Y++DDLKEVV  N   R  +A +A  I+ EE+ +F  W  SLE  P
Sbjct:  184 KAMLIGAGEMAELAATHLLHAGISKIYVANRTFERGRELARQFNGEAIHFEDLFERL---ADADIIISSTGAHEAIIRARDIKDV--LRRRKHRPMFFIDIAVPRDIDPDVNNLDNVYLYDIDDLKEVVEENLAQRREEASKALTIVEEETGKFGQWLRSLELQP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GEOSL (Glutamyl-tRNA reductase OS=Geobacter sulfurreducens GN=hemA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.803e-20
Identity = 58/164 (35.37%), Postives = 91/164 (55.49%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +++IGAG+M +L  KH +  G   ++V NR+ ER   + EE  G  I ++ L + L     AD+V +ST +   +     + ++  +         FIDI+VPR++   V DVE   +Y++DDL+ VVA+N + R  +A +A+ II EE  QF  W  SLE  P
Sbjct:  185 VMLIGAGEMCELAAKHFLNNGARGVMVTNRTYERAERLAEEFEGKAIHFEDLFDQLH---KADIVLSSTGATHYIIRPKDIDEV--IRRRKMKPMFFIDIAVPRDIDPKVNDVENVYLYDMDDLQNVVASNLQQRAEEAKKAEGIIEEEIGQFYKWISSLEVTP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNAS (Glutamyl-tRNA reductase OS=Syntrophus aciditrophicus (strain SB) GN=hemA PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 7.579e-20
Identity = 52/164 (31.71%), Postives = 90/164 (54.88%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L++GAG+M +L  +HL+ +G   + V NR+  R   + E+  G  ++ + + E+L      D+V +ST +   +  +D V     +          IDI+VPR++     D++   +YN+D L+E+V  N+  RLR+A +A+AII EE     AW  +L+ VP
Sbjct:  187 ILLVGAGEMSELAARHLLKQGIKSIFVANRTHARALEMAEQFEGKAVVLEQVPEVLK---SVDIVISSTGASNYVLTRDMVA--AALRRRKNRFLFLIDIAVPRDIEPAAGDIDNVYLYNIDHLQELVDENRNHRLREAEKAEAIIEEEVGNHTAWLSTLDVVP 345          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_BACAC2.605e-2034.55Glutamyl-tRNA reductase OS=Bacillus anthracis (str... [more]
HEM1_BACAA2.605e-2034.55Glutamyl-tRNA reductase OS=Bacillus anthracis (str... [more]
HEM1_SHEWM3.402e-2031.84Glutamyl-tRNA reductase OS=Shewanella woodyi (stra... [more]
HEM1_GEOMG3.402e-2035.37Glutamyl-tRNA reductase OS=Geobacter metallireduce... [more]
HEM1_BACHD3.402e-2030.91Glutamyl-tRNA reductase OS=Bacillus halodurans GN=... [more]
HEM1_GEOSM4.443e-2038.79Glutamyl-tRNA reductase OS=Geobacter sp. (strain M... [more]
HEM1_DESVV4.443e-2034.55Glutamyl-tRNA reductase OS=Desulfovibrio vulgaris ... [more]
HEM1_DESVH4.443e-2034.55Glutamyl-tRNA reductase OS=Desulfovibrio vulgaris ... [more]
HEM1_GEOSL5.803e-2035.37Glutamyl-tRNA reductase OS=Geobacter sulfurreducen... [more]
HEM1_SYNAS7.579e-2031.71Glutamyl-tRNA reductase OS=Syntrophus aciditrophic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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