EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GEOLS (Glutamyl-tRNA reductase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=hemA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.579e-20
Identity = 60/168 (35.71%), Postives = 93/168 (55.36%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRL----FIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L+IGAG+M +L  +H +  G   ++V NR+ ER   + EE  G  I   P  E+      AD+V TST +   +         P +E  +   R+     IDI+VPR++   V +++   +Y++DDL++VVAAN E R ++A +A+AII EE  QF  W  +LE  P
Sbjct:  185 VLLIGAGEMCELAARHFLTNGAKGVMVTNRTFERAQRLAEEFGGEAI---PFDELFLHLHKADIVLTSTGAPHAIITP------PDLEEVIKRRRMRPMFLIDIAVPRDIDPAVNEMDAVYLYDMDDLQQVVAANLEGRKQEADKAEAIIAEEIIQFYKWVATLEVTP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM11_ANADF (Glutamyl-tRNA reductase 1 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=hemA1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.579e-20
Identity = 68/216 (31.48%), Postives = 111/216 (51.39%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLLSG 675
            +L++GAGKMG L  K L   G  +++V NRS ER  A+ E++ G    ++   E+     +ADVV  ST +   +  +D VQ    ++A        ID++VPRNV    AD+     Y+VDD+++VV A +E R  +A+ A+AI+  E   FA  RD+   +P   ++     +    +     LS +G  + +K K+ +      ++ N LL G
Sbjct:  180 ILLVGAGKMGALSAKALAVLGADRILVTNRSPERGLALAEQVGGA---FRGWDELPRLLVEADVVIVSTGAPTYVVTRDLVQQA--MKARRRRSLCLIDLAVPRNVDPACADLGEVFAYDVDDMEKVVTATQEARRGEALRAEAIVEAEVMAFAKERDARAALPVLAQLRRHAEQIARAEAE-RTLSHLGPKLDEKGKKSVEAMAQAIV-NKLLHG 388          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALTY (Glutamyl-tRNA reductase OS=Salmonella typhimurium GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALTI (Glutamyl-tRNA reductase OS=Salmonella typhi GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALSV (Glutamyl-tRNA reductase OS=Salmonella schwarzengrund (strain CVM19633) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALPK (Glutamyl-tRNA reductase OS=Salmonella paratyphi A (strain AKU_12601) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALPB (Glutamyl-tRNA reductase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALPA (Glutamyl-tRNA reductase OS=Salmonella paratyphi A GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALNS (Glutamyl-tRNA reductase OS=Salmonella newport (strain SL254) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALHS (Glutamyl-tRNA reductase OS=Salmonella heidelberg (strain SL476) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_GEOLS7.579e-2035.71Glutamyl-tRNA reductase OS=Geobacter lovleyi (stra... [more]
HEM11_ANADF7.579e-2031.48Glutamyl-tRNA reductase 1 OS=Anaeromyxobacter sp. ... [more]
HEM1_SALTY9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella typhimurium ... [more]
HEM1_SALTI9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella typhi GN=hem... [more]
HEM1_SALSV9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella schwarzengru... [more]
HEM1_SALPK9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella paratyphi A ... [more]
HEM1_SALPB9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella paratyphi B ... [more]
HEM1_SALPA9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella paratyphi A ... [more]
HEM1_SALNS9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella newport (str... [more]
HEM1_SALHS9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella heidelberg (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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