EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALG2 (Glutamyl-tRNA reductase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALEP (Glutamyl-tRNA reductase OS=Salmonella enteritidis PT4 (strain P125109) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALAR (Glutamyl-tRNA reductase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALA4 (Glutamyl-tRNA reductase OS=Salmonella agona (strain SL483) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PSEHT (Glutamyl-tRNA reductase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=hemA PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 64/167 (38.32%), Postives = 97/167 (58.08%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            +L+IGAG+  +LV KHL       + V NR+ ER  ++ ++++G  I    L E L     AD+V +STAS  P+  K        VE A+   R    LFIDI+VPR++ S V +++ A +Y+VDDL+ +V+ N   R   A +A+ IITE +K+F  W  SL++V
Sbjct:  183 VLLIGAGETIELVAKHLYQNEPQNITVANRTLERARSLADQVSGDVIALAQLPERLH---KADIVISSTASTLPIIGKG------VVEQALKQRRYKPMLFIDIAVPRDIESQVGELDDAYLYSVDDLQTIVSENMSAREEAAEQAEVIITERTKEFLMWIRSLDSV 340          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_HELMO (Glutamyl-tRNA reductase OS=Heliobacillus mobilis GN=hemA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.898e-20
Identity = 58/187 (31.02%), Postives = 102/187 (54.55%), Query Frame = 1
Query:   31 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSK 591
            +V+GAGKM  L +KHLVA+G  K+++ NRS E+   + +   G  I +  ++  L    +AD++ + TA+   +  K  V+ +  ++   G    F DI+VPR++   VA V    +Y++D ++ V+  N  +R + A EA+ II  E  QF  W +SL  +P  + +     +N+G Q++   L +
Sbjct:  186 MVLGAGKMSVLTLKHLVAEGVDKIIIANRSVEKAEELAKSCGGEAISFADVNHRLE---EADILISCTAATHYVIRKSMVEQV--MDRRGGKPVFFFDIAVPRDIDPEVAQVPGTHLYDIDAMQHVIDRNLAERRKCAAEAEIIIEHEINQFMRWLNSLFVIPTIVGL-----KNKGNQIKEKELDR 362          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALDC (Glutamyl-tRNA reductase OS=Salmonella dublin (strain CT_02021853) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.293e-19
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALTDEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SALCH (Glutamyl-tRNA reductase OS=Salmonella choleraesuis GN=hemA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.293e-19
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER  A+ +E+ G E+I   LS++ +   DAD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQALADEV-GAEVI--SLSDIDARLQDADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLVQRQAAAVEAETIVEQEASEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_GEOBB (Glutamyl-tRNA reductase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.293e-19
Identity = 63/165 (38.18%), Postives = 92/165 (55.76%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPV-EAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L+IGAG+M +L  KH +  G   ++V NR+ ER   + EE +   + ++ L E L     AD++ +ST   AP F+  H +D+  V          FIDI+VPR++   V +VE   +Y VDDL  VVA N E R  +A +A+AI+ +E  QF  W  SLE  P
Sbjct:  185 VLLIGAGEMCELAAKHFINTGVRGVMVTNRTYERAEKLAEEFDAKPVHFEALMETLP---KADIILSSTG--APHFII-HEKDMEEVLRRRKHKPMFFIDIAVPRDIDPKVNNVENCYLYTVDDLNGVVATNLEQRKVEAAKAEAIVEQEIGQFFKWLSSLEVTP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BACCR (Glutamyl-tRNA reductase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.293e-19
Identity = 56/165 (33.94%), Postives = 97/165 (58.79%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L++GAGKMG+L +++L   G  K+ V+NR+  +   + E+  G     K LSE+     +AD++ +ST +   +  K+    +  VE    G  LF +DI+VPR++   + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE   F  W  +L  VP
Sbjct:  185 VLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEVMAEKYMGHA---KSLSELQCALLEADILISSTGASEYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEEIVLFKTWLSTLGVVP 343          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_SALG29.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella gallinarum (... [more]
HEM1_SALEP9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella enteritidis ... [more]
HEM1_SALAR9.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella arizonae (st... [more]
HEM1_SALA49.898e-2035.19Glutamyl-tRNA reductase OS=Salmonella agona (strai... [more]
HEM1_PSEHT9.898e-2038.32Glutamyl-tRNA reductase OS=Pseudoalteromonas halop... [more]
HEM1_HELMO9.898e-2031.02Glutamyl-tRNA reductase OS=Heliobacillus mobilis G... [more]
HEM1_SALDC1.293e-1935.19Glutamyl-tRNA reductase OS=Salmonella dublin (stra... [more]
HEM1_SALCH1.293e-1935.19Glutamyl-tRNA reductase OS=Salmonella choleraesuis... [more]
HEM1_GEOBB1.293e-1938.18Glutamyl-tRNA reductase OS=Geobacter bemidjiensis ... [more]
HEM1_BACCR1.293e-1933.94Glutamyl-tRNA reductase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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