EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BACC4 (Glutamyl-tRNA reductase OS=Bacillus cereus (strain B4264) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.293e-19
Identity = 56/165 (33.94%), Postives = 97/165 (58.79%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L++GAGKMG+L +++L   G  K+ V+NR+  +   + E+  G     K LSE+     +AD++ +ST +   +  K+    +  VE    G  LF +DI+VPR++   + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE   F  W  +L  VP
Sbjct:  185 VLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEVMAEKYMGHA---KSLSELQCALLEADILISSTGASEYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEEIVLFKTWLSTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_BACC2 (Glutamyl-tRNA reductase OS=Bacillus cereus (strain G9842) GN=hemA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.293e-19
Identity = 56/165 (33.94%), Postives = 97/165 (58.79%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLF-IDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            +L++GAGKMG+L +++L   G  K+ V+NR+  +   + E+  G     K LSE+     +AD++ +ST +   +  K+    +  VE    G  LF +DI+VPR++   + ++E + +Y++DDL+ VV AN+ +RL++A + Q +I EE   F  W  +L  VP
Sbjct:  185 VLILGAGKMGELALQNLYGSGARKVTVMNRTLSKAEVMAEKYMGHA---KSLSELQCALLEADILISSTGASEYVITKEM---MTKVEKMRSGRPLFMVDIAVPRDIDPAIDELEGSFLYDIDDLQGVVEANRAERLKEAEKIQFMIEEEIVLFKTWLSTLGVVP 343          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_IDILO (Glutamyl-tRNA reductase OS=Idiomarina loihiensis GN=hemA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.688e-19
Identity = 56/165 (33.94%), Postives = 98/165 (59.39%), Query Frame = 1
Query:   22 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETV 516
            +++L+IGAG   +LV +HL  +G T+++V NR+ +R + + E +         LSE+L     AD+V +STAS  P+  K  ++    ++       L ID++VPR++   V +++ A +Y VDDL+ +++ N  +R + A EAQ II +++K+F  W  SL +V
Sbjct:  180 SKVLLIGAGDTSELVAQHLKQQGVTEILVANRTLQRASEMAERVGATAHSLSELSELLP---QADIVVSSTASTLPIVGKGSIEKA--LKKRRHRPMLLIDLAVPRDIEEQVNELDDAYLYTVDDLQSIISENIRNREQAAREAQVIIQQQTKEFNDWLKSLNSV 339          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_AQUAE (Glutamyl-tRNA reductase OS=Aquifex aeolicus GN=hemA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.688e-19
Identity = 61/177 (34.46%), Postives = 102/177 (57.63%), Query Frame = 1
Query:   22 ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGL----RLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIES 540
            A++L+IGAG+MG+L   +L   G  K+ + NR+ ER   + +EL+G  + ++ L E L      D+V  ST +      KD++      E +V       +  IDI+VPRNV     +VE   +Y++DDLK+VV  N ++R+++A   + I+ +E K+F  W +SL+  PY LE+++
Sbjct:  181 AKVLLIGAGEMGELAANYLRRFGA-KLHITNRTYERALKLVKELSGNVLRFEELKEYLPLM---DIVIVSTGA------KDYILKREDFERSVRERHYEPQFVIDIAVPRNVDPEAGNVEGVFLYDIDDLKQVVEENLKERIKEAQRGEIILWDEVKKFMNWYESLKAEPYILELKA 347          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SYNFM (Glutamyl-tRNA reductase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.761e-19
Identity = 53/165 (32.12%), Postives = 92/165 (55.76%), Query Frame = 1
Query:   25 RMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVP 519
            R+L+IGAG+M +L  +HL+A+G   MVV NR+ ER   + +          P   +L+   + D+V +ST +  P+   + V+    +         FIDI+VPR++   + +++   +Y++DDL+ V+  N+E+R R+A  A+ II  E+ +F  W  +L  VP
Sbjct:  186 RVLLIGAGEMAELAAEHLLAQGVRHMVVANRTLERAVDLAKRFRAETT---PFDHILNALKNTDIVLSSTGAPEPILKYNDVR--ARMRERRNKPLFFIDIAVPRDIDPKINEIDNVYLYDIDDLQGVIDLNREERKREAERAEHIIAGETLKFQEWMATLNVVP 345          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PSEA6 (Glutamyl-tRNA reductase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.761e-19
Identity = 67/225 (29.78%), Postives = 120/225 (53.33%), Query Frame = 1
Query:    7 SSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLR----LFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKKNKEGLAMTLPVVIRNNLL 669
            SS   + +L+IGAG+  +LV KH+  +G  K+ V NR+  R  AI + L    +    L+++ +   DAD+V +STAS+ P+  K  V      E A+   R      +D++VPR++ + V +++ A +Y VDDL+++V  N E R   A++AQ +I E+++Q+  WR    ++    +       +Q   +   AL+++ +G   K  E +   L   + N+L+
Sbjct:  176 SSLKKSNVLLIGAGETIELVAKHMHEQGVKKLSVANRTLARAEAIAQPLGATTLT---LTQIPAHLKDADIVISSTASQLPILGKGLV------ERALKDRRHKPMFLVDLAVPRDIEAEVGELDDAYLYTVDDLQQIVEKNIESRQHAALQAQQMIEEQAQQYMLWRQGQSSIDVLRDFRQQS-ESQRDTLIAKALNQLADG---KEAEQVIKELANKLTNSLI 387          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_EDWI9 (Glutamyl-tRNA reductase OS=Edwardsiella ictaluri (strain 93-146) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.761e-19
Identity = 57/162 (35.19%), Postives = 95/162 (58.64%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S A   +L++GAG+  +LV +HL       M++ NR+ ER  ++ +E+ G E+I  PL+++ +  ADAD+V +STAS  P+  K  V+    ++A      L +DI+VPR++   V D+  A +Y+VDDL  ++  N   R   A++A+ I+ +E   F AW
Sbjct:  179 SLARLNVLLVGAGETIELVARHLHQHQVQHMMIANRTRERAQSLADEV-GAEVI--PLADIDARLADADIVISSTASPLPIIGKGMVERA--LKARRNRPMLLVDIAVPRDIEPEVGDLANAYLYSVDDLHAIIQGNMAQRQEAAVQAEHIVQQECANFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHISS (Glutamyl-tRNA reductase OS=Shigella sonnei (strain Ss046) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHIFL (Glutamyl-tRNA reductase OS=Shigella flexneri GN=hemA PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHIF8 (Glutamyl-tRNA reductase OS=Shigella flexneri serotype 5b (strain 8401) GN=hemA PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_BACC41.293e-1933.94Glutamyl-tRNA reductase OS=Bacillus cereus (strain... [more]
HEM1_BACC21.293e-1933.94Glutamyl-tRNA reductase OS=Bacillus cereus (strain... [more]
HEM1_IDILO1.688e-1933.94Glutamyl-tRNA reductase OS=Idiomarina loihiensis G... [more]
HEM1_AQUAE1.688e-1934.46Glutamyl-tRNA reductase OS=Aquifex aeolicus GN=hem... [more]
HEM1_SYNFM3.761e-1932.12Glutamyl-tRNA reductase OS=Syntrophobacter fumarox... [more]
HEM1_PSEA63.761e-1929.78Glutamyl-tRNA reductase OS=Pseudoalteromonas atlan... [more]
HEM1_EDWI93.761e-1935.19Glutamyl-tRNA reductase OS=Edwardsiella ictaluri (... [more]
HEM1_SHISS4.912e-1934.57Glutamyl-tRNA reductase OS=Shigella sonnei (strain... [more]
HEM1_SHIFL4.912e-1934.57Glutamyl-tRNA reductase OS=Shigella flexneri GN=he... [more]
HEM1_SHIF84.912e-1934.57Glutamyl-tRNA reductase OS=Shigella flexneri serot... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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