EY735286

Overview
NameEY735286
Unique NameEY735286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHIBS (Glutamyl-tRNA reductase OS=Shigella boydii serotype 4 (strain Sb227) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_SHIB3 (Glutamyl-tRNA reductase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_PELTS (Glutamyl-tRNA reductase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 62/196 (31.63%), Postives = 101/196 (51.53%), Query Frame = 1
Query:   28 MLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAWRDSLETVPY*LEIESLC*RNQGGQVRINALSKMGEGILKK 615
            +LVIGAGKM +L  +HLVA G + ++V NRS ER  A+ E+  G  + +    E+  C   AD+V + TA+   +   + V  +  ++   G     +DI+VPR++ + V ++    ++++DDLK V+  N  +R + A++A+ II EE   F  W      VP                  I+AL K G+ I +K
Sbjct:  185 VLVIGAGKMSELTARHLVANGVSSVIVSNRSFERAVALAEQFRGRAVRF---DELYRCMEAADIVISCTAASHCVVKAEEVSRV--MDKRRGRAIFMVDIAVPRDIEAEVGNLAGVTLFDIDDLKNVIDQNLAERKQAAVKAEEIIEEELDGFMKWLGMQFVVP-----------------TISALKKWGDEIKQK 358          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_KLEP7 (Glutamyl-tRNA reductase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 57/162 (35.19%), Postives = 97/162 (59.88%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S ++  +L++GAG+  +LV +HL      KMV+ NR+ ER  A+ EE+ G E+I   LS++     +AD++ +STAS  P+  K  V+    ++A      L +DI+VPR+V   V  +  A +Y+VDDL+ ++  N   R   A++A++I+ +E+ +F AW
Sbjct:  179 SLSSVTVLLVGAGETIELVARHLREHHVRKMVIANRTRERAQALAEEV-GAEVI--ALSDIDERLKEADIIISSTASPLPIIGKGMVERA--LKARRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQNIIQHNLAQRKAAAVQAESIVEQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ECOSE (Glutamyl-tRNA reductase OS=Escherichia coli (strain SE11) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ECOLC (Glutamyl-tRNA reductase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ECOHS (Glutamyl-tRNA reductase OS=Escherichia coli O9:H4 (strain HS) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ECO8A (Glutamyl-tRNA reductase OS=Escherichia coli O8 (strain IAI1) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ECO55 (Glutamyl-tRNA reductase OS=Escherichia coli (strain 55989 / EAEC) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
BLAST of EY735286 vs. ExPASy Swiss-Prot
Match: HEM1_ECO24 (Glutamyl-tRNA reductase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hemA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   10 SHATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSEMLSCAADADVVFTSTASEAPLFLKDHVQDLPPVEAAVGGLRLFIDISVPRNVGSCVADVETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFAAW 495
            S +T  +L++GAG+  +LV +HL      KM++ NR+ ER   + +E+ G E+I   LSE+     +AD++ +STAS  P+  K  V+    +++      L +DI+VPR+V   V  +  A +Y+VDDL+ +++ N   R   A+EA+ I+ +E+ +F AW
Sbjct:  179 SLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEV-GAEVI--ALSEIDERLREADIIISSTASPLPIIGKGMVERA--LKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAW 335          
The following BLAST results are available for this feature:
BLAST of EY735286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
HEM1_SHIBS4.912e-1934.57Glutamyl-tRNA reductase OS=Shigella boydii serotyp... [more]
HEM1_SHIB34.912e-1934.57Glutamyl-tRNA reductase OS=Shigella boydii serotyp... [more]
HEM1_PELTS4.912e-1931.63Glutamyl-tRNA reductase OS=Pelotomaculum thermopro... [more]
HEM1_KLEP74.912e-1935.19Glutamyl-tRNA reductase OS=Klebsiella pneumoniae s... [more]
HEM1_ECOSE4.912e-1934.57Glutamyl-tRNA reductase OS=Escherichia coli (strai... [more]
HEM1_ECOLC4.912e-1934.57Glutamyl-tRNA reductase OS=Escherichia coli (strai... [more]
HEM1_ECOHS4.912e-1934.57Glutamyl-tRNA reductase OS=Escherichia coli O9:H4 ... [more]
HEM1_ECO8A4.912e-1934.57Glutamyl-tRNA reductase OS=Escherichia coli O8 (st... [more]
HEM1_ECO554.912e-1934.57Glutamyl-tRNA reductase OS=Escherichia coli (strai... [more]
HEM1_ECO244.912e-1934.57Glutamyl-tRNA reductase OS=Escherichia coli O139:H... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-093-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735286 ID=EY735286; Name=EY735286; organism=Citrus sinensis; type=EST; length=972bp
CCTGAATCTTCACATGCCACTGCCCGGATGTTGGTTATTGGAGCAGGCAA
GATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGATGCACTAAGA
TGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCATCTGCGAGGAG
CTCAACGGTGTTGAGATAATTTATAAACCTCTCTCAGAAATGTTGTCCTG
TGCTGCTGATGCAGATGTGGTCTTCACCAGCACAGCATCTGAAGCTCCAT
TATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGAGGCTGCAGTT
GGGGGTTTGAGGCTCTTTATTGATATCTCCGTTCCTCGTAATGTGGGCTC
TTGTGTTGCAGATGTTGAAACTGCACGGGTTTACAATGTTGATGACCTTA
AGGAGGTAGTGGCTGCTAATAAAGAGGACAGGCTCCGAAAAGCAATGGAA
GCTCAGGCTATTATCACTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGA
TTCATTGGAGACTGTTCCCTACTAATTAGAAATTGAGAGCTTATGCTGAA
GAAATCAGGGTGGGCAAGTTAGAATAAATGCCCTATCAAAAATGGGTGAA
GGAATCCTCAAAAAAAACAAGGAGGGGCTGGCAATGACCTTACCCGTGGT
AATCAGGAATAACCTTCTTTCTGGGGCCCAATGGCACCCTTTGGAAATGG
GGGGGGAATGGAAGCAGGGATTCTAAAGAAAACCCTTGGAAAACTGGGCT
GGCTTAAAAAAAAAAGGGTTGGGCCTTGAAAAAAAAAAACATTTCTCTTT
TCCAAAGAAAAAGGGGTCGGGCGCAAAAAAAAAAAAAAAACCCCAAAAGG
GGGGACTTTTTTGAAAAACAAGGTTTTGTGCAAAGGGGGACCTTTCTTTT
TTCCCTTTCCCCCAAAATAGTAAAAAAAAAAAAAAAAAAAACCCCCTCCC
CCCCCCTTTGTTGTGGGGTGGT
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